Arthroderma gypseum (strain ATCC MYA-4604 / CBS 118893) (Microsporum gypseum)

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; Eurotiomycetes; Eurotiomycetidae; Onygenales; Arthrodermataceae; Nannizzia; Nannizzia gypsea

Average proteome isoelectric point is 6.72

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 8921 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|E4UR97|E4UR97_ARTGP NADH:ubiquinone reductase (non-electrogenic) OS=Arthroderma gypseum (strain ATCC MYA-4604 / CBS 118893) OX=535722 GN=MGYG_03165 PE=3 SV=1
MM1 pKa = 7.61RR2 pKa = 11.84FSFVSLILASAAFVSAAKK20 pKa = 9.78MGDD23 pKa = 3.02IIGTVNTDD31 pKa = 3.66DD32 pKa = 3.79NCASEE37 pKa = 5.73GVDD40 pKa = 5.39LLDD43 pKa = 3.85STCTASSKK51 pKa = 10.93GSINVTADD59 pKa = 3.48TILCFAYY66 pKa = 9.63PDD68 pKa = 4.35SEE70 pKa = 4.7CKK72 pKa = 10.06TSTTTPDD79 pKa = 2.85GVYY82 pKa = 10.44LEE84 pKa = 4.88KK85 pKa = 11.01GCNVDD90 pKa = 3.7EE91 pKa = 4.99KK92 pKa = 11.18LSEE95 pKa = 4.6DD96 pKa = 4.22DD97 pKa = 5.41VSLLCYY103 pKa = 10.43AA104 pKa = 4.95

Molecular weight: 10.91 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|E5QZN5|E5QZN5_ARTGP Uncharacterized protein OS=Arthroderma gypseum (strain ATCC MYA-4604 / CBS 118893) OX=535722 GN=MGYG_01222 PE=3 SV=1
MM1 pKa = 7.53SPPEE5 pKa = 3.72PVAQRR10 pKa = 11.84FRR12 pKa = 11.84NLVWRR17 pKa = 11.84EE18 pKa = 3.13RR19 pKa = 11.84SLRR22 pKa = 11.84FTCEE26 pKa = 3.06NFLRR30 pKa = 11.84LTVFPSFRR38 pKa = 11.84GKK40 pKa = 8.14QTGQAEE46 pKa = 4.58SVEE49 pKa = 4.37GEE51 pKa = 4.37HH52 pKa = 6.03EE53 pKa = 4.32NKK55 pKa = 10.29RR56 pKa = 11.84ADD58 pKa = 3.37YY59 pKa = 11.05GNRR62 pKa = 11.84KK63 pKa = 5.68TKK65 pKa = 9.83RR66 pKa = 11.84RR67 pKa = 11.84RR68 pKa = 11.84RR69 pKa = 11.84RR70 pKa = 11.84RR71 pKa = 11.84NGSKK75 pKa = 8.77TANFVALRR83 pKa = 11.84TTLACCAARR92 pKa = 11.84LLDD95 pKa = 3.63INSYY99 pKa = 10.95LDD101 pKa = 3.37AGRR104 pKa = 11.84KK105 pKa = 7.14EE106 pKa = 3.95SRR108 pKa = 11.84KK109 pKa = 10.18AFWGWCSIIKK119 pKa = 10.13HH120 pKa = 5.36DD121 pKa = 4.34TCNKK125 pKa = 5.61PTPYY129 pKa = 10.97

Molecular weight: 15.08 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

8921

0

8921

4257366

35

9330

477.2

52.89

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.201 ± 0.026

1.263 ± 0.011

5.596 ± 0.019

6.268 ± 0.025

3.623 ± 0.018

6.669 ± 0.02

2.419 ± 0.012

5.153 ± 0.02

5.153 ± 0.023

8.847 ± 0.029

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.134 ± 0.01

3.803 ± 0.013

6.143 ± 0.03

4.102 ± 0.022

6.146 ± 0.022

8.669 ± 0.032

5.903 ± 0.018

5.831 ± 0.017

1.327 ± 0.009

2.75 ± 0.013
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski