Olleya aquimaris

Taxonomy: cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Olleya

Average proteome isoelectric point is 6.5

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2642 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A327R5Q1|A0A327R5Q1_9FLAO Outer membrane receptor protein involved in Fe transport OS=Olleya aquimaris OX=639310 GN=LY08_02422 PE=3 SV=1
DDD2 pKa = 5.84IDDD5 pKa = 3.66NCDDD9 pKa = 3.07NIDDD13 pKa = 3.75EE14 pKa = 6.35FDDD17 pKa = 3.4DDD19 pKa = 3.97DDD21 pKa = 4.02FTACQGDDD29 pKa = 4.7DDD31 pKa = 5.45DD32 pKa = 5.3DDD34 pKa = 4.19NSYYY38 pKa = 10.12GAPEEE43 pKa = 3.83CDDD46 pKa = 5.83IDDD49 pKa = 3.54NCDDD53 pKa = 3.27LVDDD57 pKa = 4.18DDD59 pKa = 4.23DD60 pKa = 3.87SVIGLPDDD68 pKa = 3.3VITEEE73 pKa = 4.18PLGDDD78 pKa = 3.84CQGVAEEE85 pKa = 4.25TVDDD89 pKa = 3.53LNASDDD95 pKa = 4.74SSISYYY101 pKa = 9.43WSNGSTDDD109 pKa = 2.79SIIVSDDD116 pKa = 3.57NTYYY120 pKa = 8.97VSVTGNSGCTTTSSYYY136 pKa = 10.75STAVPSDDD144 pKa = 3.61LSGYYY149 pKa = 10.36MLANKKK155 pKa = 9.68EE156 pKa = 4.13YYY158 pKa = 10.47KKK160 pKa = 9.62EE161 pKa = 4.1TVNGGGVGVINNGKKK176 pKa = 8.49KK177 pKa = 10.55KKK179 pKa = 10.22RR180 pKa = 11.84DDD182 pKa = 3.94DD183 pKa = 3.81SVFSFVKKK191 pKa = 10.35DDD193 pKa = 5.02IDDD196 pKa = 4.07DDD198 pKa = 3.54SSYYY202 pKa = 10.26QQSIFDDD209 pKa = 4.16ASVTLPTFYYY219 pKa = 11.18YY220 pKa = 9.46TADDD224 pKa = 4.43DD225 pKa = 4.36DD226 pKa = 4.57EEE228 pKa = 4.57DDD230 pKa = 3.62TVPEEE235 pKa = 4.67QTITINSDDD244 pKa = 2.92YYY246 pKa = 11.92DD247 pKa = 3.43DD248 pKa = 4.37KKK250 pKa = 10.75KKK252 pKa = 11.04KK253 pKa = 9.82GTLIIDDD260 pKa = 3.6PEEE263 pKa = 4.0YYY265 pKa = 9.48HHH267 pKa = 7.2KK268 pKa = 10.41DDD270 pKa = 4.59EEE272 pKa = 4.94DD273 pKa = 3.82ATIIFNQSCSVMIDDD288 pKa = 2.96YY289 pKa = 11.52DD290 pKa = 3.48DDD292 pKa = 4.16NDDD295 pKa = 4.05CLIDDD300 pKa = 3.83NGYYY304 pKa = 8.85VVFYYY309 pKa = 10.5EEE311 pKa = 4.5KK312 pKa = 10.43KK313 pKa = 9.65KKK315 pKa = 9.51DDD317 pKa = 3.19GTTIDDD323 pKa = 3.82NIYYY327 pKa = 7.32QKKK330 pKa = 9.29EE331 pKa = 3.89HHH333 pKa = 6.53KKK335 pKa = 10.42YYY337 pKa = 10.41NNHHH341 pKa = 3.92TMMGLFISEEE351 pKa = 4.05YY352 pKa = 9.81KK353 pKa = 10.21KKK355 pKa = 10.6EEE357 pKa = 5.25KK358 pKa = 9.69YY359 pKa = 8.18DDD361 pKa = 3.87YYY363 pKa = 10.39STICEEE369 pKa = 4.39IPAPSNPLPCNDDD382 pKa = 5.56DD383 pKa = 5.41DD384 pKa = 7.38DD385 pKa = 7.62DD386 pKa = 7.72DD387 pKa = 7.58DD388 pKa = 7.65DD389 pKa = 7.65DD390 pKa = 7.65DD391 pKa = 7.64DD392 pKa = 7.49DD393 pKa = 7.59DD394 pKa = 7.3DD395 pKa = 5.79DD396 pKa = 6.17DD397 pKa = 6.2VGQVNTIDDD406 pKa = 4.87YYY408 pKa = 10.35VPAKKK413 pKa = 10.24EEE415 pKa = 4.12NINLVSQTHHH425 pKa = 5.81KKK427 pKa = 9.96KKK429 pKa = 10.55YY430 pKa = 9.42ISNIRR435 pKa = 11.84GTTVISKKK443 pKa = 9.43EE444 pKa = 4.14IVTKKK449 pKa = 10.53NNSLSVDDD457 pKa = 3.5TKKK460 pKa = 10.87PEEE463 pKa = 4.01EEE465 pKa = 4.45YY466 pKa = 10.3FTIVLDDD473 pKa = 4.06NRR475 pKa = 11.84LQKKK479 pKa = 10.92KK480 pKa = 9.54IKKK483 pKa = 10.28SN

Molecular weight: 53.04 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A327RL91|A0A327RL91_9FLAO Glycine/D-amino acid oxidase-like deaminating enzyme OS=Olleya aquimaris OX=639310 GN=LY08_00048 PE=4 SV=1
MM1 pKa = 8.0PKK3 pKa = 9.06RR4 pKa = 11.84TFQPSKK10 pKa = 9.13RR11 pKa = 11.84KK12 pKa = 9.48RR13 pKa = 11.84RR14 pKa = 11.84NKK16 pKa = 9.49HH17 pKa = 3.94GFRR20 pKa = 11.84EE21 pKa = 4.27RR22 pKa = 11.84MASANGRR29 pKa = 11.84KK30 pKa = 9.04VLARR34 pKa = 11.84RR35 pKa = 11.84RR36 pKa = 11.84AKK38 pKa = 10.09GRR40 pKa = 11.84KK41 pKa = 8.0KK42 pKa = 10.66LSVSTEE48 pKa = 3.92TRR50 pKa = 11.84HH51 pKa = 6.44KK52 pKa = 10.57KK53 pKa = 9.81

Molecular weight: 6.35 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2642

0

2642

899899

27

2399

340.6

38.4

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.296 ± 0.048

0.752 ± 0.015

5.955 ± 0.037

6.222 ± 0.05

5.229 ± 0.039

6.16 ± 0.048

1.734 ± 0.021

7.927 ± 0.042

7.782 ± 0.063

9.257 ± 0.053

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.007 ± 0.023

6.691 ± 0.055

3.296 ± 0.029

3.663 ± 0.029

3.076 ± 0.029

6.294 ± 0.04

6.339 ± 0.05

6.278 ± 0.035

0.97 ± 0.015

4.072 ± 0.033
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski