Tortoise microvirus 56

Taxonomy: Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; unclassified Microviridae

Average proteome isoelectric point is 6.64

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 7 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4P8W9Y2|A0A4P8W9Y2_9VIRU Uncharacterized protein OS=Tortoise microvirus 56 OX=2583161 PE=4 SV=1
MM1 pKa = 7.68LSLEE5 pKa = 4.12LSSWNIDD12 pKa = 3.33LDD14 pKa = 4.02CFYY17 pKa = 11.21DD18 pKa = 4.91DD19 pKa = 4.63EE20 pKa = 6.26GLLFDD25 pKa = 3.75YY26 pKa = 10.83YY27 pKa = 11.08KK28 pKa = 11.03YY29 pKa = 10.53RR30 pKa = 11.84DD31 pKa = 3.99YY32 pKa = 10.15EE33 pKa = 4.07TAMQQQSFFKK43 pKa = 10.22SYY45 pKa = 11.14SDD47 pKa = 4.95AVLDD51 pKa = 5.19DD52 pKa = 4.57NMLFDD57 pKa = 6.36KK58 pKa = 10.45IRR60 pKa = 11.84KK61 pKa = 8.28RR62 pKa = 11.84NEE64 pKa = 3.35VEE66 pKa = 4.99LFSEE70 pKa = 5.64CYY72 pKa = 9.98

Molecular weight: 8.82 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4P8W6E5|A0A4P8W6E5_9VIRU Uncharacterized protein OS=Tortoise microvirus 56 OX=2583161 PE=4 SV=1
MM1 pKa = 7.64LLHH4 pKa = 6.67SGLVISILIVIKK16 pKa = 9.74QQSFIIIEE24 pKa = 4.29TVEE27 pKa = 3.93VNIPAGEE34 pKa = 4.52FKK36 pKa = 10.6RR37 pKa = 11.84QQSYY41 pKa = 10.17SVTRR45 pKa = 11.84KK46 pKa = 9.09VMYY49 pKa = 10.15IKK51 pKa = 10.58RR52 pKa = 11.84QGSQKK57 pKa = 9.88FRR59 pKa = 11.84VEE61 pKa = 3.84INEE64 pKa = 4.84LIHH67 pKa = 7.85IRR69 pKa = 11.84DD70 pKa = 3.89FKK72 pKa = 9.6TVKK75 pKa = 10.08IVDD78 pKa = 4.78EE79 pKa = 4.35IRR81 pKa = 11.84LTPNTLRR88 pKa = 11.84TTNYY92 pKa = 9.41INLFIQFHH100 pKa = 5.57IVIRR104 pKa = 11.84MHH106 pKa = 7.04VIINTKK112 pKa = 10.15KK113 pKa = 10.47NSTAQQCTRR122 pKa = 11.84LRR124 pKa = 11.84YY125 pKa = 9.76AEE127 pKa = 3.92QSLLKK132 pKa = 10.27SQQTLYY138 pKa = 11.36VLIGTVRR145 pKa = 11.84IVAYY149 pKa = 10.28LIEE152 pKa = 4.3QMITSYY158 pKa = 11.31NGLNIVRR165 pKa = 11.84DD166 pKa = 3.39IRR168 pKa = 11.84KK169 pKa = 9.71NIIIRR174 pKa = 11.84NVIRR178 pKa = 11.84KK179 pKa = 9.37GYY181 pKa = 7.67STEE184 pKa = 4.05FNEE187 pKa = 5.79LRR189 pKa = 11.84QDD191 pKa = 3.01WVKK194 pKa = 10.64FIII197 pKa = 4.47

Molecular weight: 23.25 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

7

0

7

1716

72

561

245.1

28.11

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.128 ± 0.873

1.515 ± 0.622

5.245 ± 1.038

4.254 ± 0.97

5.594 ± 1.392

4.487 ± 1.324

1.632 ± 0.402

7.576 ± 1.53

4.021 ± 0.48

9.79 ± 2.064

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.681 ± 0.33

5.886 ± 1.036

3.497 ± 0.76

4.837 ± 1.398

5.769 ± 0.665

8.974 ± 0.798

5.944 ± 0.742

6.76 ± 0.772

0.816 ± 0.188

5.594 ± 1.223
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski