Torque teno virus 29

Taxonomy: Viruses; Anelloviridae; Alphatorquevirus

Average proteome isoelectric point is 7.65

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q9JG77|Q9JG77_9VIRU ORF2 ORF1 ORF3 genes isolate: TTVyon-KC009 OS=Torque teno virus 29 OX=687368 PE=4 SV=1
MM1 pKa = 7.59PWRR4 pKa = 11.84PPGHH8 pKa = 5.95NVPGRR13 pKa = 11.84EE14 pKa = 4.15NQWFAAVFHH23 pKa = 6.52SHH25 pKa = 7.17ASWCGCGDD33 pKa = 3.71FVGHH37 pKa = 7.16LNSIAPRR44 pKa = 11.84FSNAGPPRR52 pKa = 11.84PPPGLDD58 pKa = 2.87QHH60 pKa = 6.82NPEE63 pKa = 4.84GPAGPGGPPAILPALPAPADD83 pKa = 3.67PEE85 pKa = 4.24PPPRR89 pKa = 11.84RR90 pKa = 11.84GGGADD95 pKa = 3.14GGAAGGLAIADD106 pKa = 3.64APGGYY111 pKa = 10.48GEE113 pKa = 5.89DD114 pKa = 4.38DD115 pKa = 3.98LDD117 pKa = 3.94EE118 pKa = 4.96LFAAAAEE125 pKa = 4.25DD126 pKa = 4.55DD127 pKa = 3.84MM128 pKa = 7.94

Molecular weight: 12.95 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|Q9JG77|Q9JG77_9VIRU ORF2 ORF1 ORF3 genes isolate: TTVyon-KC009 OS=Torque teno virus 29 OX=687368 PE=4 SV=1
MM1 pKa = 7.11AWWWGRR7 pKa = 11.84WRR9 pKa = 11.84RR10 pKa = 11.84RR11 pKa = 11.84WRR13 pKa = 11.84PRR15 pKa = 11.84YY16 pKa = 9.39RR17 pKa = 11.84RR18 pKa = 11.84RR19 pKa = 11.84TWRR22 pKa = 11.84VRR24 pKa = 11.84RR25 pKa = 11.84RR26 pKa = 11.84RR27 pKa = 11.84PRR29 pKa = 11.84RR30 pKa = 11.84TFRR33 pKa = 11.84RR34 pKa = 11.84RR35 pKa = 11.84RR36 pKa = 11.84RR37 pKa = 11.84GRR39 pKa = 11.84YY40 pKa = 6.52VSRR43 pKa = 11.84RR44 pKa = 11.84RR45 pKa = 11.84RR46 pKa = 11.84RR47 pKa = 11.84RR48 pKa = 11.84YY49 pKa = 7.93YY50 pKa = 9.88RR51 pKa = 11.84RR52 pKa = 11.84RR53 pKa = 11.84LRR55 pKa = 11.84RR56 pKa = 11.84GRR58 pKa = 11.84RR59 pKa = 11.84RR60 pKa = 11.84GRR62 pKa = 11.84RR63 pKa = 11.84KK64 pKa = 9.26RR65 pKa = 11.84HH66 pKa = 4.96RR67 pKa = 11.84QTLILRR73 pKa = 11.84QWQPDD78 pKa = 3.71VVRR81 pKa = 11.84HH82 pKa = 5.17CKK84 pKa = 8.0ITGWMPLIICGSGSTQNNFITHH106 pKa = 6.46MDD108 pKa = 4.1DD109 pKa = 4.15FPPMGYY115 pKa = 9.9SYY117 pKa = 11.47GGNFTNLTFSLEE129 pKa = 4.26GIYY132 pKa = 10.33EE133 pKa = 3.89QFLYY137 pKa = 10.43HH138 pKa = 6.71RR139 pKa = 11.84NRR141 pKa = 11.84WSRR144 pKa = 11.84SNHH147 pKa = 5.98DD148 pKa = 4.26LDD150 pKa = 3.61LARR153 pKa = 11.84YY154 pKa = 9.37KK155 pKa = 10.44GTTLKK160 pKa = 10.69LYY162 pKa = 10.21RR163 pKa = 11.84HH164 pKa = 6.14HH165 pKa = 6.48TLDD168 pKa = 4.29YY169 pKa = 9.38IVSYY173 pKa = 11.06NRR175 pKa = 11.84TGPFQISDD183 pKa = 3.38MTYY186 pKa = 10.9LSTHH190 pKa = 6.66PALMLLQKK198 pKa = 10.46HH199 pKa = 6.11RR200 pKa = 11.84IVVPSLLTKK209 pKa = 10.51PKK211 pKa = 9.45GKK213 pKa = 10.17RR214 pKa = 11.84SIKK217 pKa = 10.33VRR219 pKa = 11.84IKK221 pKa = 10.4PPKK224 pKa = 10.15LMLNKK229 pKa = 9.61WYY231 pKa = 7.82FTKK234 pKa = 10.49DD235 pKa = 2.96ICSMGLFQLQATACTLYY252 pKa = 10.93NPWLRR257 pKa = 11.84DD258 pKa = 3.56TTKK261 pKa = 10.86SPVIASRR268 pKa = 11.84VLKK271 pKa = 10.85NSIYY275 pKa = 10.42TNLSNLPEE283 pKa = 4.45HH284 pKa = 6.44NGARR288 pKa = 11.84EE289 pKa = 4.02SIRR292 pKa = 11.84NKK294 pKa = 10.09LHH296 pKa = 6.6PEE298 pKa = 3.94SLTGSVPNQKK308 pKa = 9.38GWEE311 pKa = 3.95YY312 pKa = 11.13SYY314 pKa = 10.75TKK316 pKa = 10.83LMAPIYY322 pKa = 9.49YY323 pKa = 9.47QANRR327 pKa = 11.84NSTYY331 pKa = 11.01NWLNYY336 pKa = 7.47QQNYY340 pKa = 7.81SQTYY344 pKa = 7.69QAFKK348 pKa = 11.13QKK350 pKa = 9.88MNNNLTLIQQEE361 pKa = 4.35YY362 pKa = 8.38MYY364 pKa = 9.71HH365 pKa = 5.73YY366 pKa = 9.16PNSVTTDD373 pKa = 3.55IIGKK377 pKa = 8.24NTLTHH382 pKa = 6.78DD383 pKa = 3.08WGIYY387 pKa = 8.32SPYY390 pKa = 9.45WLTPTRR396 pKa = 11.84ISLDD400 pKa = 2.74WGTPWTYY407 pKa = 10.82VRR409 pKa = 11.84YY410 pKa = 10.13NPLADD415 pKa = 3.6KK416 pKa = 11.29GIGNAVYY423 pKa = 9.95AQWCSEE429 pKa = 3.93QTSNLDD435 pKa = 3.57TKK437 pKa = 10.78KK438 pKa = 10.54SKK440 pKa = 10.87CIMKK444 pKa = 9.92DD445 pKa = 3.23LPLWCIFYY453 pKa = 10.56GYY455 pKa = 10.31VDD457 pKa = 4.66WIIKK461 pKa = 7.95STGVSSAVTDD471 pKa = 3.37MRR473 pKa = 11.84VAIISPYY480 pKa = 9.39TEE482 pKa = 3.94PALIGSSPEE491 pKa = 3.51VGYY494 pKa = 10.64IPVSDD499 pKa = 4.04TFCNGDD505 pKa = 3.66MPFLAPYY512 pKa = 9.89IPVGWWIKK520 pKa = 7.84WYY522 pKa = 10.19PMIAHH527 pKa = 5.6QKK529 pKa = 9.04EE530 pKa = 4.23VFEE533 pKa = 5.65AIVNCGPFVPRR544 pKa = 11.84DD545 pKa = 3.32QTTPSWEE552 pKa = 3.47ITMGYY557 pKa = 9.9KK558 pKa = 9.23MDD560 pKa = 4.01WLWGGSPLPSQAIDD574 pKa = 4.3DD575 pKa = 4.41PCQKK579 pKa = 8.79PTHH582 pKa = 6.25EE583 pKa = 4.97LPDD586 pKa = 4.35PDD588 pKa = 3.36RR589 pKa = 11.84HH590 pKa = 5.65PRR592 pKa = 11.84MLQVSDD598 pKa = 3.74PTKK601 pKa = 10.63LGPKK605 pKa = 8.7TVFHH609 pKa = 6.29KK610 pKa = 10.2WDD612 pKa = 3.07WRR614 pKa = 11.84RR615 pKa = 11.84GMLSKK620 pKa = 10.78RR621 pKa = 11.84SIKK624 pKa = 10.11RR625 pKa = 11.84VQEE628 pKa = 4.12DD629 pKa = 3.76STDD632 pKa = 3.59DD633 pKa = 3.82EE634 pKa = 5.04YY635 pKa = 12.07VAGPLPRR642 pKa = 11.84KK643 pKa = 9.56RR644 pKa = 11.84NKK646 pKa = 9.93FDD648 pKa = 2.98TRR650 pKa = 11.84AQGLQSPEE658 pKa = 3.92KK659 pKa = 10.44EE660 pKa = 4.08NYY662 pKa = 8.52TLLQALQDD670 pKa = 3.91SGQEE674 pKa = 3.98SSSEE678 pKa = 4.05NQEE681 pKa = 3.59QAPQEE686 pKa = 4.12KK687 pKa = 9.78EE688 pKa = 4.18GQKK691 pKa = 9.9EE692 pKa = 3.78ALMEE696 pKa = 3.76QLQLQKK702 pKa = 10.39QHH704 pKa = 5.57QRR706 pKa = 11.84VLKK709 pKa = 10.59RR710 pKa = 11.84GLKK713 pKa = 10.3LLLGDD718 pKa = 3.49VLRR721 pKa = 11.84LRR723 pKa = 11.84RR724 pKa = 11.84GVHH727 pKa = 5.93WDD729 pKa = 3.37PLLSS733 pKa = 3.68

Molecular weight: 86.87 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3

0

3

975

114

733

325.0

37.47

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.231 ± 2.984

1.333 ± 0.103

4.615 ± 0.912

4.0 ± 0.95

2.462 ± 0.345

6.974 ± 2.378

2.667 ± 0.298

4.205 ± 1.288

6.154 ± 1.867

7.795 ± 1.643

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.564 ± 0.277

4.41 ± 0.148

8.41 ± 2.796

4.615 ± 1.262

9.026 ± 1.617

8.0 ± 3.239

5.949 ± 1.473

3.59 ± 0.988

3.385 ± 0.889

4.615 ± 1.474
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski