Taibaiella soli

Taxonomy: cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Chitinophagia; Chitinophagales; Chitinophagaceae; Taibaiella

Average proteome isoelectric point is 6.65

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4294 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2W2BJB6|A0A2W2BJB6_9BACT Uncharacterized protein OS=Taibaiella soli OX=1649169 GN=DN068_07365 PE=4 SV=1
MM1 pKa = 7.27GGCVATDD8 pKa = 4.53RR9 pKa = 11.84ITVDD13 pKa = 3.56GNRR16 pKa = 11.84VGYY19 pKa = 7.82MCRR22 pKa = 11.84TEE24 pKa = 4.96PINDD28 pKa = 4.63LDD30 pKa = 4.94SGWQFLAGDD39 pKa = 4.27EE40 pKa = 4.3SQEE43 pKa = 4.18YY44 pKa = 10.93VDD46 pKa = 4.14VADD49 pKa = 3.78NSGVYY54 pKa = 9.84DD55 pKa = 3.63VNTIANYY62 pKa = 10.27DD63 pKa = 3.65PEE65 pKa = 6.15IIPFLHH71 pKa = 6.51FPIGSEE77 pKa = 4.0FEE79 pKa = 3.94RR80 pKa = 11.84DD81 pKa = 3.44EE82 pKa = 4.24VSGNLTQIRR91 pKa = 3.88

Molecular weight: 10.12 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2W2BV27|A0A2W2BV27_9BACT Probable membrane transporter protein OS=Taibaiella soli OX=1649169 GN=DN068_16475 PE=3 SV=1
MM1 pKa = 7.64SFPSDD6 pKa = 3.47LTNSQWKK13 pKa = 9.83AISAFLPVKK22 pKa = 9.98TKK24 pKa = 10.74GIHH27 pKa = 5.38NLRR30 pKa = 11.84SIINALFYY38 pKa = 10.26IVKK41 pKa = 9.0TGCPWRR47 pKa = 11.84YY48 pKa = 9.39LPRR51 pKa = 11.84CFPLWQSVYY60 pKa = 7.84YY61 pKa = 9.94HH62 pKa = 6.23FRR64 pKa = 11.84RR65 pKa = 11.84LQSIGVLNRR74 pKa = 11.84LMSKK78 pKa = 10.11FRR80 pKa = 11.84TLLRR84 pKa = 11.84VNAGKK89 pKa = 10.35SPQPSVALIDD99 pKa = 3.79SQSIRR104 pKa = 11.84TAAGVSKK111 pKa = 10.95SKK113 pKa = 10.27GWDD116 pKa = 3.17GAKK119 pKa = 10.06RR120 pKa = 11.84LVGRR124 pKa = 11.84KK125 pKa = 7.85RR126 pKa = 11.84HH127 pKa = 5.72LVTDD131 pKa = 3.96TLGLPLALCVTSASASDD148 pKa = 3.92RR149 pKa = 11.84EE150 pKa = 4.62GMAAMTPYY158 pKa = 11.02LNRR161 pKa = 11.84IYY163 pKa = 10.82NLKK166 pKa = 8.84TLFADD171 pKa = 3.56SGYY174 pKa = 9.61MGIHH178 pKa = 5.77ITDD181 pKa = 3.34ARR183 pKa = 11.84LIITSRR189 pKa = 11.84KK190 pKa = 9.87AIADD194 pKa = 3.57KK195 pKa = 10.95CNSLSGVLTEE205 pKa = 4.67TSGTKK210 pKa = 8.76PKK212 pKa = 9.92RR213 pKa = 11.84WVVEE217 pKa = 4.61RR218 pKa = 11.84SFAWIGHH225 pKa = 4.35YY226 pKa = 9.92RR227 pKa = 11.84RR228 pKa = 11.84LAKK231 pKa = 10.54DD232 pKa = 3.76FEE234 pKa = 4.46RR235 pKa = 11.84HH236 pKa = 4.41TASSEE241 pKa = 3.76AMIKK245 pKa = 10.03IVFISIMLRR254 pKa = 11.84RR255 pKa = 11.84LNVVV259 pKa = 3.04

Molecular weight: 29.18 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4294

0

4294

1541204

26

3735

358.9

39.98

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.956 ± 0.042

1.016 ± 0.017

5.281 ± 0.032

5.055 ± 0.055

4.674 ± 0.028

7.041 ± 0.041

1.98 ± 0.021

6.768 ± 0.03

6.056 ± 0.051

8.857 ± 0.048

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.531 ± 0.02

5.752 ± 0.044

4.018 ± 0.023

3.953 ± 0.022

3.821 ± 0.034

6.528 ± 0.042

6.651 ± 0.084

6.576 ± 0.032

1.223 ± 0.013

4.264 ± 0.029
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski