Eimeria tenella (Coccidian parasite)

Taxonomy: cellular organisms; Eukaryota; Sar; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Eimeriidae; Eimeria

Average proteome isoelectric point is 6.95

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 8595 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|U6KV80|U6KV80_EIMTE Uncharacterized protein OS=Eimeria tenella OX=5802 GN=ETH_00020980 PE=4 SV=1
MM1 pKa = 7.08EE2 pKa = 5.34AAAATDD8 pKa = 3.57TAAAAAATGVAAATAAEE25 pKa = 4.49VTTEE29 pKa = 3.73AAAEE33 pKa = 4.25TSCAAVQAAQATFAVSGAAASAADD57 pKa = 3.53EE58 pKa = 4.31AAANRR63 pKa = 11.84IDD65 pKa = 3.85FVRR68 pKa = 11.84AADD71 pKa = 3.71TAAAAAAADD80 pKa = 4.08ADD82 pKa = 3.92AQKK85 pKa = 10.96PIMKK89 pKa = 9.66EE90 pKa = 4.17LYY92 pKa = 10.33ASAAAAADD100 pKa = 3.53AATAGIAADD109 pKa = 3.94AAGEE113 pKa = 4.06AADD116 pKa = 4.21AAAGAADD123 pKa = 3.99AAAAAADD130 pKa = 3.84AAADD134 pKa = 3.48AAAAADD140 pKa = 3.66ASTEE144 pKa = 3.97TSAAATDD151 pKa = 3.98TSSLGAAAADD161 pKa = 3.68VAAADD166 pKa = 3.89LAAAAEE172 pKa = 4.32VATAEE177 pKa = 4.25LAEE180 pKa = 4.37AAGDD184 pKa = 3.97PADD187 pKa = 4.1AAADD191 pKa = 3.59AAAAAAEE198 pKa = 4.32AACDD202 pKa = 3.59ACNFCADD209 pKa = 3.84FCSNSWCLRR218 pKa = 11.84CLPLRR223 pKa = 11.84QQTRR227 pKa = 11.84EE228 pKa = 4.11RR229 pKa = 11.84LWGPCCCSCCSCCFCNTAAAAEE251 pKa = 4.0AAAAAEE257 pKa = 4.38AGFAAEE263 pKa = 4.89PNSSSIDD270 pKa = 3.57SYY272 pKa = 11.25NAAVAAAAALAADD285 pKa = 4.18RR286 pKa = 11.84RR287 pKa = 11.84RR288 pKa = 11.84RR289 pKa = 11.84GG290 pKa = 3.1

Molecular weight: 27.08 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|U6KV52|U6KV52_EIMTE Rna polymerase ii b3 subunit OS=Eimeria tenella OX=5802 GN=ETH_00035430 PE=4 SV=1
RR1 pKa = 6.82PTALVLPFGTHH12 pKa = 5.75SSSSSSNSSSSSSSKK27 pKa = 10.39NCSSTSSRR35 pKa = 11.84RR36 pKa = 11.84VKK38 pKa = 10.26RR39 pKa = 11.84MRR41 pKa = 11.84MKK43 pKa = 10.53RR44 pKa = 11.84RR45 pKa = 11.84RR46 pKa = 11.84SGKK49 pKa = 9.51NSSKK53 pKa = 9.69TSSSSSSKK61 pKa = 9.47SSRR64 pKa = 11.84RR65 pKa = 11.84SRR67 pKa = 11.84SKK69 pKa = 9.87RR70 pKa = 11.84SSSRR74 pKa = 11.84RR75 pKa = 11.84SSSS78 pKa = 2.78

Molecular weight: 8.44 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

8595

0

8595

4341326

10

9860

505.1

54.22

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

14.753 ± 0.089

2.015 ± 0.017

3.612 ± 0.021

6.173 ± 0.03

2.743 ± 0.018

6.457 ± 0.031

2.07 ± 0.011

2.431 ± 0.021

3.794 ± 0.029

10.069 ± 0.043

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.387 ± 0.011

2.229 ± 0.013

6.093 ± 0.032

9.034 ± 0.079

6.151 ± 0.025

9.219 ± 0.045

4.341 ± 0.022

4.956 ± 0.025

1.0 ± 0.007

1.472 ± 0.012
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski