Ophiocordyceps camponoti-leonardi (nom. inval.)

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; sordariomyceta; Sordariomycetes; Hypocreomycetidae; Hypocreales; Ophiocordycipitaceae; Ophiocordyceps; unclassified Ophiocordyceps

Average proteome isoelectric point is 6.68

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 7043 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A369GQ40|A0A369GQ40_9HYPO Uncharacterized protein OS=Ophiocordyceps camponoti-leonardi (nom. inval.) OX=2039875 GN=CP532_1056 PE=4 SV=1
MM1 pKa = 7.16VSWEE5 pKa = 4.29RR6 pKa = 11.84DD7 pKa = 3.35FKK9 pKa = 11.0MEE11 pKa = 4.16EE12 pKa = 3.35VWYY15 pKa = 9.98VCGVCGLEE23 pKa = 4.99HH24 pKa = 7.96DD25 pKa = 4.68DD26 pKa = 3.67AQHH29 pKa = 6.67RR30 pKa = 11.84STYY33 pKa = 9.78RR34 pKa = 11.84CYY36 pKa = 10.9VDD38 pKa = 5.33HH39 pKa = 7.37FNDD42 pKa = 5.77DD43 pKa = 4.99DD44 pKa = 7.09DD45 pKa = 7.56DD46 pKa = 7.2DD47 pKa = 7.56DD48 pKa = 7.55DD49 pKa = 7.23DD50 pKa = 5.91DD51 pKa = 4.25VHH53 pKa = 7.18NNHH56 pKa = 6.46NDD58 pKa = 3.55DD59 pKa = 5.3GDD61 pKa = 5.17DD62 pKa = 4.77DD63 pKa = 5.73DD64 pKa = 5.83EE65 pKa = 5.33NSNNDD70 pKa = 3.12EE71 pKa = 4.08

Molecular weight: 8.46 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A369GHF9|A0A369GHF9_9HYPO ATP-dependent (S)-NAD(P)H-hydrate dehydratase OS=Ophiocordyceps camponoti-leonardi (nom. inval.) OX=2039875 GN=CP532_5202 PE=3 SV=1
DDD2 pKa = 3.39KK3 pKa = 10.82KK4 pKa = 10.54KK5 pKa = 10.54KKK7 pKa = 9.16KKK9 pKa = 9.83KK10 pKa = 9.21SLLASILIILRR21 pKa = 11.84TSLEEE26 pKa = 3.95GRR28 pKa = 11.84FPAFCALLVGGSSLLHHH45 pKa = 6.45KK46 pKa = 10.21LTTIVTRR53 pKa = 11.84VARR56 pKa = 11.84PRR58 pKa = 11.84LSNAACLSLARR69 pKa = 11.84WLASFVASWLSLGLLQKKK87 pKa = 10.35RR88 pKa = 11.84PSPLRR93 pKa = 11.84RR94 pKa = 11.84EEE96 pKa = 4.23EE97 pKa = 4.33PPASSGLVPNKKK109 pKa = 10.16DD110 pKa = 3.79DD111 pKa = 3.27EE112 pKa = 4.66MAGKKK117 pKa = 8.14LDDD120 pKa = 3.52TLFAVTQALDDD131 pKa = 3.8IIGEEE136 pKa = 3.97WSRR139 pKa = 11.84RR140 pKa = 11.84KKK142 pKa = 9.81RR143 pKa = 11.84RR144 pKa = 11.84VAARR148 pKa = 11.84KKK150 pKa = 9.03SDDD153 pKa = 3.17DDD155 pKa = 4.51DD156 pKa = 5.26ISRR159 pKa = 11.84MADDD163 pKa = 2.91MSFVASCAFIMWAWFYYY180 pKa = 11.59PDDD183 pKa = 3.94LPRR186 pKa = 11.84SYYY189 pKa = 11.55KKK191 pKa = 9.85ITSAAHHH198 pKa = 5.06DDD200 pKa = 3.65RR201 pKa = 11.84LLEEE205 pKa = 3.91LRR207 pKa = 11.84RR208 pKa = 11.84CRR210 pKa = 11.84TGEEE214 pKa = 3.62RR215 pKa = 11.84YYY217 pKa = 10.22VDDD220 pKa = 2.96GQAPLLGSMCADDD233 pKa = 3.32YY234 pKa = 11.12LPRR237 pKa = 11.84QWGDDD242 pKa = 3.16AVSVPFPCDDD252 pKa = 3.16VHHH255 pKa = 6.82GRR257 pKa = 11.84GPCCEEE263 pKa = 3.6YY264 pKa = 10.47HH265 pKa = 5.13WRR267 pKa = 11.84RR268 pKa = 11.84FSQSWLWSMYYY279 pKa = 10.02YYY281 pKa = 11.12PLAAALQLRR290 pKa = 11.84RR291 pKa = 11.84PTLRR295 pKa = 11.84SPFKKK300 pKa = 10.7VVSAARR306 pKa = 11.84SSAFLATFITLFYYY320 pKa = 11.04YY321 pKa = 8.7VCLGRR326 pKa = 11.84TRR328 pKa = 11.84LGPHHH333 pKa = 6.58LGRR336 pKa = 11.84GPSSCDDD343 pKa = 3.29IDDD346 pKa = 4.68GICVANGCFLCGWSILIEEE365 pKa = 4.17TSRR368 pKa = 11.84RR369 pKa = 11.84KKK371 pKa = 10.68DD372 pKa = 3.26ALFAAPRR379 pKa = 11.84AMATLLPRR387 pKa = 11.84RR388 pKa = 11.84FPTGLQWRR396 pKa = 11.84EEE398 pKa = 3.7LAFAASTAVVFTCVQEEE415 pKa = 3.93PKKK418 pKa = 10.01VRR420 pKa = 11.84GMLGGILSLAMRR432 pKa = 11.84Q

Molecular weight: 48.2 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6963

80

7043

3884336

36

5063

551.5

60.75

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.399 ± 0.028

1.286 ± 0.011

6.219 ± 0.021

5.99 ± 0.03

3.452 ± 0.019

7.118 ± 0.038

2.4 ± 0.014

4.028 ± 0.018

4.473 ± 0.024

8.977 ± 0.036

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.216 ± 0.011

3.144 ± 0.016

6.196 ± 0.034

3.974 ± 0.022

7.049 ± 0.025

8.345 ± 0.036

5.523 ± 0.018

6.409 ± 0.02

1.373 ± 0.01

2.428 ± 0.016
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski