Fusarium oxysporum NRRL 32931

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; sordariomyceta; Sordariomycetes; Hypocreomycetidae; Hypocreales; Nectriaceae; Fusarium; Fusarium oxysporum species complex; Fusarium oxysporum

Average proteome isoelectric point is 6.44

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 20767 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|W9HMB3|W9HMB3_FUSOX Uncharacterized protein OS=Fusarium oxysporum NRRL 32931 OX=660029 GN=FOYG_14246 PE=4 SV=1
MM1 pKa = 7.6RR2 pKa = 11.84FSVLFAFGLVTNVANASVCKK22 pKa = 9.81PRR24 pKa = 11.84PSDD27 pKa = 3.44SSSASSVEE35 pKa = 4.17SVTLSISATAPTTTVAAEE53 pKa = 4.18TTTATSADD61 pKa = 3.78LSSTFASTVGNEE73 pKa = 4.06TTTEE77 pKa = 4.44AIEE80 pKa = 4.24TATTTDD86 pKa = 3.89TITTAATTTAEE97 pKa = 4.27TTTADD102 pKa = 3.44ATTTSADD109 pKa = 3.44TFVPIPTFDD118 pKa = 3.3VLAIGAQVDD127 pKa = 4.16GQKK130 pKa = 10.67LRR132 pKa = 11.84GHH134 pKa = 5.52VTTDD138 pKa = 3.3YY139 pKa = 11.72GMGWNLDD146 pKa = 3.54RR147 pKa = 11.84TPPILAFSIDD157 pKa = 3.69PDD159 pKa = 4.04TNQVKK164 pKa = 9.49EE165 pKa = 4.01VNGNYY170 pKa = 10.39LCLQYY175 pKa = 11.33GDD177 pKa = 4.72PNEE180 pKa = 5.15DD181 pKa = 3.32YY182 pKa = 11.3PNFLKK187 pKa = 10.96LCDD190 pKa = 4.45PGSVTNIDD198 pKa = 3.32IGLGMVTCEE207 pKa = 3.75QTRR210 pKa = 11.84DD211 pKa = 3.32RR212 pKa = 11.84RR213 pKa = 11.84LEE215 pKa = 4.12CSTPAAQCVEE225 pKa = 4.31DD226 pKa = 4.9DD227 pKa = 3.65MTRR230 pKa = 11.84MVTCSEE236 pKa = 4.19LPGTFTGFYY245 pKa = 8.88TYY247 pKa = 11.04SGMSEE252 pKa = 4.75GITLVMGPEE261 pKa = 4.5SNGPTGTAYY270 pKa = 10.53QSVDD274 pKa = 3.62LGIEE278 pKa = 3.99PASQQ282 pKa = 2.85

Molecular weight: 29.59 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|W9IYV0|W9IYV0_FUSOX Uncharacterized protein OS=Fusarium oxysporum NRRL 32931 OX=660029 GN=FOYG_02598 PE=4 SV=1
MM1 pKa = 6.94TGGMIVRR8 pKa = 11.84RR9 pKa = 11.84RR10 pKa = 11.84RR11 pKa = 11.84QATTGWGIGSQSAKK25 pKa = 7.28TQPRR29 pKa = 11.84RR30 pKa = 11.84SRR32 pKa = 11.84GPAGMSS38 pKa = 3.07

Molecular weight: 4.09 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

17279

3488

20767

9582963

30

11522

461.5

51.21

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.279 ± 0.015

1.332 ± 0.008

5.79 ± 0.012

6.171 ± 0.02

3.807 ± 0.01

6.72 ± 0.018

2.411 ± 0.008

5.125 ± 0.011

4.974 ± 0.014

8.856 ± 0.02

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.277 ± 0.006

3.817 ± 0.01

5.937 ± 0.021

4.074 ± 0.012

5.893 ± 0.016

8.153 ± 0.019

6.004 ± 0.021

6.051 ± 0.013

1.522 ± 0.007

2.807 ± 0.008
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski