Galliform aveparvovirus 1 (isolate Chicken/Hungary/ABU-P1/-/-) (ChPV)

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Quintoviricetes; Piccovirales; Parvoviridae; Parvovirinae; Aveparvovirus; Galliform aveparvovirus 1

Average proteome isoelectric point is 5.17

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|D3X6W9|D3X6W9_CHPV1 VP1 OS=Galliform aveparvovirus 1 (isolate Chicken/Hungary/ABU-P1/-/-) OX=717641 GN=VP1 PE=3 SV=1
MM1 pKa = 7.54CWYY4 pKa = 9.58NANITQIQTVEE15 pKa = 4.34GDD17 pKa = 3.29PCTNPDD23 pKa = 3.7VFHH26 pKa = 7.01EE27 pKa = 4.94LYY29 pKa = 10.8FPIKK33 pKa = 9.05QHH35 pKa = 6.94AMDD38 pKa = 4.3ARR40 pKa = 11.84MLKK43 pKa = 9.56MKK45 pKa = 10.35IEE47 pKa = 4.43DD48 pKa = 4.56KK49 pKa = 10.43IQKK52 pKa = 10.38GDD54 pKa = 3.54FTQDD58 pKa = 2.11IHH60 pKa = 9.4LDD62 pKa = 3.55MTLTQCIQTALSDD75 pKa = 4.11DD76 pKa = 4.07PAGIWPCVDD85 pKa = 3.88RR86 pKa = 11.84LANYY90 pKa = 10.1CNVILASIGTQQ101 pKa = 2.95

Molecular weight: 11.51 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|D3X6X0|D3X6X0_CHPV1 VP2 OS=Galliform aveparvovirus 1 (isolate Chicken/Hungary/ABU-P1/-/-) OX=717641 GN=VP2 PE=3 SV=1
MM1 pKa = 7.73KK2 pKa = 10.34YY3 pKa = 9.62KK4 pKa = 10.54APKK7 pKa = 9.99GYY9 pKa = 10.38VPSLPTTDD17 pKa = 3.26EE18 pKa = 3.84EE19 pKa = 5.11AYY21 pKa = 10.57HH22 pKa = 5.48HH23 pKa = 5.6TRR25 pKa = 11.84WWLDD29 pKa = 3.09HH30 pKa = 6.06VEE32 pKa = 4.21NYY34 pKa = 9.84GKK36 pKa = 10.32NKK38 pKa = 10.47AIGRR42 pKa = 11.84GKK44 pKa = 10.37GKK46 pKa = 10.08ARR48 pKa = 11.84KK49 pKa = 8.92EE50 pKa = 3.58LTPQQKK56 pKa = 10.52AEE58 pKa = 4.06RR59 pKa = 11.84KK60 pKa = 9.73RR61 pKa = 11.84FFITQAQKK69 pKa = 11.0NKK71 pKa = 9.36KK72 pKa = 8.18PNYY75 pKa = 8.63GIPSSSQHH83 pKa = 6.38KK84 pKa = 10.15EE85 pKa = 3.51FFKK88 pKa = 10.88NHH90 pKa = 5.37QGAQGGKK97 pKa = 9.06AKK99 pKa = 10.48QKK101 pKa = 9.22TKK103 pKa = 10.32HH104 pKa = 6.26IEE106 pKa = 3.78NQAPQRR112 pKa = 11.84QEE114 pKa = 4.02DD115 pKa = 4.5PEE117 pKa = 4.44EE118 pKa = 4.84GPAPKK123 pKa = 9.94QPRR126 pKa = 11.84VEE128 pKa = 4.13EE129 pKa = 3.82NPYY132 pKa = 9.72NQEE135 pKa = 3.76EE136 pKa = 4.7LEE138 pKa = 4.14EE139 pKa = 4.18MMADD143 pKa = 3.59EE144 pKa = 5.22NEE146 pKa = 4.24PDD148 pKa = 3.26QSGIPMEE155 pKa = 5.07LSDD158 pKa = 5.16GPGTVGGGGGGGIGHH173 pKa = 6.08STGNWNCDD181 pKa = 3.88TIWAEE186 pKa = 4.35NTCKK190 pKa = 10.12TYY192 pKa = 11.09ASRR195 pKa = 11.84HH196 pKa = 5.21CVCLMRR202 pKa = 11.84DD203 pKa = 3.08MDD205 pKa = 3.74QYY207 pKa = 11.7KK208 pKa = 10.82AIGNANGQHH217 pKa = 6.56GLDD220 pKa = 4.19TEE222 pKa = 4.3NQTQYY227 pKa = 11.33FGFSTPWNYY236 pKa = 9.77IDD238 pKa = 4.04FNQYY242 pKa = 9.58SVHH245 pKa = 6.49FSPRR249 pKa = 11.84DD250 pKa = 3.35WQQLVNNYY258 pKa = 9.49SRR260 pKa = 11.84WRR262 pKa = 11.84PRR264 pKa = 11.84AVHH267 pKa = 6.1VKK269 pKa = 9.8IFNLQVIQKK278 pKa = 7.67TVTDD282 pKa = 3.47SGTQYY287 pKa = 11.55SNDD290 pKa = 3.3LTGTIQIFADD300 pKa = 3.29QEE302 pKa = 3.86GRR304 pKa = 11.84YY305 pKa = 8.96PRR307 pKa = 11.84LLYY310 pKa = 10.11PNQTTLMGPFPSNIYY325 pKa = 9.89YY326 pKa = 10.39LPQYY330 pKa = 11.35AYY332 pKa = 6.86MTSMFNSGGPTVSSWWGFPTRR353 pKa = 11.84EE354 pKa = 3.94SAFYY358 pKa = 10.8CLDD361 pKa = 3.62EE362 pKa = 5.5SPSQMLRR369 pKa = 11.84TGNEE373 pKa = 3.5WEE375 pKa = 4.34TTFIFPSSTQWCSNKK390 pKa = 9.53ISTVSITQRR399 pKa = 11.84QNPLYY404 pKa = 9.56DD405 pKa = 3.09TWNVNGRR412 pKa = 11.84GDD414 pKa = 3.5DD415 pKa = 3.43AKK417 pKa = 10.82RR418 pKa = 11.84GNFCTWRR425 pKa = 11.84SPWYY429 pKa = 8.08PGPYY433 pKa = 9.04IYY435 pKa = 10.27LTDD438 pKa = 3.69TSAASQRR445 pKa = 11.84LEE447 pKa = 3.71NLANVAVGPDD457 pKa = 4.01GMPLAPGMPQYY468 pKa = 10.59RR469 pKa = 11.84SEE471 pKa = 4.16SDD473 pKa = 2.88KK474 pKa = 11.71DD475 pKa = 3.75EE476 pKa = 4.33YY477 pKa = 11.7LHH479 pKa = 6.2TFWVPKK485 pKa = 8.65KK486 pKa = 10.66VKK488 pKa = 9.85MNEE491 pKa = 3.38GDD493 pKa = 3.24IRR495 pKa = 11.84NAQIDD500 pKa = 3.9VSTATKK506 pKa = 10.3VQVDD510 pKa = 3.66TSTLYY515 pKa = 8.65NTCPRR520 pKa = 11.84SGYY523 pKa = 9.47MSTVSQGGAPAPIVWSGCVPGMIWDD548 pKa = 4.13NRR550 pKa = 11.84PATYY554 pKa = 10.12FDD556 pKa = 5.85PIWQQFPEE564 pKa = 4.05TDD566 pKa = 3.39EE567 pKa = 3.85QFKK570 pKa = 10.7IISQLGGIPVKK581 pKa = 10.2EE582 pKa = 4.33SPGHH586 pKa = 5.77IFVKK590 pKa = 8.93VTPKK594 pKa = 9.21PTGAANGLIDD604 pKa = 4.38EE605 pKa = 4.89YY606 pKa = 11.14CTFTCTVEE614 pKa = 4.23IEE616 pKa = 4.34WEE618 pKa = 4.11LEE620 pKa = 3.66PLNTHH625 pKa = 5.84RR626 pKa = 11.84WNMRR630 pKa = 11.84SMISYY635 pKa = 7.73EE636 pKa = 4.11TTDD639 pKa = 3.03AKK641 pKa = 10.71AGRR644 pKa = 11.84QIVDD648 pKa = 3.27EE649 pKa = 4.36NGQYY653 pKa = 9.53QVNVNSADD661 pKa = 3.08ITRR664 pKa = 11.84LYY666 pKa = 6.64MTKK669 pKa = 10.31RR670 pKa = 11.84APRR673 pKa = 11.84TNN675 pKa = 3.16

Molecular weight: 76.64 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4

0

4

2006

101

694

501.5

56.7

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.334 ± 0.19

2.542 ± 0.434

5.234 ± 0.415

5.833 ± 0.663

3.838 ± 0.292

7.228 ± 0.521

2.044 ± 0.206

5.583 ± 0.407

5.135 ± 0.771

5.982 ± 1.107

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.891 ± 0.212

6.231 ± 0.138

6.78 ± 0.206

5.384 ± 0.683

4.187 ± 0.307

6.73 ± 0.429

7.428 ± 0.76

4.786 ± 0.171

2.742 ± 0.273

4.088 ± 0.556
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski