Acaromyces ingoldii

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Exobasidiomycetes; Exobasidiales; Cryptobasidiaceae; Acaromyces

Average proteome isoelectric point is 6.69

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 8019 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A316YF16|A0A316YF16_9BASI Cir_N domain-containing protein OS=Acaromyces ingoldii OX=215250 GN=FA10DRAFT_174389 PE=3 SV=1
MM1 pKa = 8.02DD2 pKa = 4.47NMINKK7 pKa = 9.47AKK9 pKa = 10.18EE10 pKa = 3.96FASSDD15 pKa = 3.33QGRR18 pKa = 11.84DD19 pKa = 3.28MLNKK23 pKa = 10.35FGGGGNNNNNDD34 pKa = 3.73NNNSGSGGFGSGGNSGSDD52 pKa = 3.37SYY54 pKa = 12.15GSGGNSGNDD63 pKa = 3.33SYY65 pKa = 12.18GSGGNSGNDD74 pKa = 3.33SYY76 pKa = 12.18GSGGNSGSGGGFGGSGGRR94 pKa = 11.84NNDD97 pKa = 3.26DD98 pKa = 3.73SYY100 pKa = 12.15GGGNSGSGGGFGGNDD115 pKa = 3.36STSSGGFGGNNQGDD129 pKa = 4.47SYY131 pKa = 11.75SSGNQRR137 pKa = 11.84GGSGGGQFGSSDD149 pKa = 3.42SDD151 pKa = 3.89SYY153 pKa = 12.12GSGNQQGGGGGFGSGNQGGNDD174 pKa = 3.48SYY176 pKa = 12.08GSGNQGSGGYY186 pKa = 10.3GGGNQDD192 pKa = 3.47NYY194 pKa = 11.75

Molecular weight: 18.08 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A316YWW8|A0A316YWW8_9BASI Histone H3 OS=Acaromyces ingoldii OX=215250 GN=FA10DRAFT_237339 PE=3 SV=1
MM1 pKa = 8.11DD2 pKa = 4.94SALQEE7 pKa = 4.12QIRR10 pKa = 11.84KK11 pKa = 9.69GKK13 pKa = 9.37GLKK16 pKa = 8.44KK17 pKa = 8.67TQTNDD22 pKa = 2.77RR23 pKa = 11.84SKK25 pKa = 10.5PAVAGAVGGSGGGGGGSGGSGLAKK49 pKa = 10.33APPVPGGGGAAAAPSSGGPPALAGLFAGGMPKK81 pKa = 10.45LKK83 pKa = 10.39PSGGPGAPPPTVPAARR99 pKa = 11.84PPRR102 pKa = 11.84PPGSAAPPPPAPPAPAAPKK121 pKa = 10.13RR122 pKa = 11.84PGGAPPPPPPPPAPASSVATPPRR145 pKa = 11.84TAPPPPRR152 pKa = 11.84PPGRR156 pKa = 11.84GPPAPTSAPPPPRR169 pKa = 11.84PPPSLPGRR177 pKa = 11.84APAAPPAPPPPPPPASSSPAPPARR201 pKa = 11.84TVPQAPAPPKK211 pKa = 10.16RR212 pKa = 11.84PGGAAPPPPPSRR224 pKa = 11.84PMSSSSTVGRR234 pKa = 11.84TVPPPPPGRR243 pKa = 11.84GSPSSPSTAGPTRR256 pKa = 11.84SVPPPPPRR264 pKa = 11.84ASAASSAPPPAPPRR278 pKa = 11.84APPAPSRR285 pKa = 11.84MPAAPPPPAPQRR297 pKa = 11.84GPAAPPPTAPSRR309 pKa = 11.84APAAPPPPAPSRR321 pKa = 11.84APATPPSRR329 pKa = 11.84TPAAPPPPPPGRR341 pKa = 11.84APPPTAAAPPPPSAAPPAPSSRR363 pKa = 11.84ASLQPVARR371 pKa = 11.84ANGFGTVGNGTGNGTASSTAPSGKK395 pKa = 10.05SVV397 pKa = 2.87

Molecular weight: 37.03 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

8019

0

8019

4210363

49

5290

525.0

57.22

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

10.379 ± 0.03

1.049 ± 0.009

5.777 ± 0.019

6.219 ± 0.026

3.252 ± 0.016

7.648 ± 0.025

2.38 ± 0.012

3.777 ± 0.018

4.515 ± 0.025

8.832 ± 0.032

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.993 ± 0.008

2.933 ± 0.014

5.849 ± 0.028

4.328 ± 0.025

6.784 ± 0.024

9.301 ± 0.044

5.536 ± 0.019

6.0 ± 0.022

1.263 ± 0.009

2.186 ± 0.014
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski