Monkey B-lymphotropic papovavirus

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Sepolyvirales; Polyomaviridae; unclassified Polyomaviridae; African green monkey polyomavirus

Average proteome isoelectric point is 7.02

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q90131|Q90131_9POLY Minor capsid protein OS=Monkey B-lymphotropic papovavirus OX=10574 PE=3 SV=1
MM1 pKa = 7.58APQRR5 pKa = 11.84KK6 pKa = 8.36RR7 pKa = 11.84QDD9 pKa = 3.48GACKK13 pKa = 8.94KK14 pKa = 7.79TCPIPAPVPRR24 pKa = 11.84LLVKK28 pKa = 10.8GGVEE32 pKa = 3.97VLEE35 pKa = 4.41VRR37 pKa = 11.84TGPDD41 pKa = 3.47AITQIEE47 pKa = 4.77AYY49 pKa = 10.29LNPRR53 pKa = 11.84MGNNIPSEE61 pKa = 4.0DD62 pKa = 3.61LYY64 pKa = 11.38GYY66 pKa = 10.56SNSINTAFSKK76 pKa = 11.09ASDD79 pKa = 3.87TPNKK83 pKa = 8.68GTLPCYY89 pKa = 10.03SVAVIKK95 pKa = 10.87LPLLNEE101 pKa = 4.73DD102 pKa = 3.9MTCDD106 pKa = 3.74TILMWEE112 pKa = 4.1AVSVKK117 pKa = 9.88TEE119 pKa = 3.84VVGISSLVNLHH130 pKa = 6.16QGGKK134 pKa = 9.56YY135 pKa = 9.87IYY137 pKa = 9.33GSSSGCVPVQGTTYY151 pKa = 11.11HH152 pKa = 5.69MFAVGGEE159 pKa = 3.95PLEE162 pKa = 4.2LQGLVASSTATYY174 pKa = 9.73PDD176 pKa = 3.86DD177 pKa = 3.58VVAIKK182 pKa = 10.66NMKK185 pKa = 9.52PGNQGLDD192 pKa = 3.51PKK194 pKa = 11.16AKK196 pKa = 10.51ALLDD200 pKa = 3.67KK201 pKa = 10.9DD202 pKa = 3.32GKK204 pKa = 10.91YY205 pKa = 9.68PVEE208 pKa = 4.34VWCPDD213 pKa = 3.3PSKK216 pKa = 11.43NEE218 pKa = 3.45NTRR221 pKa = 11.84YY222 pKa = 10.01YY223 pKa = 11.35GSFTGGATTPPVMQFTNSVTTVLLDD248 pKa = 3.75EE249 pKa = 5.12NGVGPLCKK257 pKa = 9.66GDD259 pKa = 4.92KK260 pKa = 10.77LFLSCADD267 pKa = 3.05IAGVHH272 pKa = 5.36TNYY275 pKa = 10.39SEE277 pKa = 4.22TQSWRR282 pKa = 11.84GLPRR286 pKa = 11.84YY287 pKa = 9.97FNVTLRR293 pKa = 11.84KK294 pKa = 9.82RR295 pKa = 11.84IVKK298 pKa = 9.99NPYY301 pKa = 9.02PVSSLLNSFFSGLMPQIQGQPMEE324 pKa = 4.52GVSGQVEE331 pKa = 4.1EE332 pKa = 4.1VRR334 pKa = 11.84IFEE337 pKa = 4.29GTEE340 pKa = 3.96GLPGDD345 pKa = 4.53PDD347 pKa = 3.8LNRR350 pKa = 11.84YY351 pKa = 7.58VDD353 pKa = 4.7KK354 pKa = 10.92FCQNQTVLPVSNDD367 pKa = 2.95MM368 pKa = 4.89

Molecular weight: 39.93 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|Q90131|Q90131_9POLY Minor capsid protein OS=Monkey B-lymphotropic papovavirus OX=10574 PE=3 SV=1
MM1 pKa = 7.48ALVPWFPQVDD11 pKa = 3.83YY12 pKa = 10.54LFPGFTSFSYY22 pKa = 10.85YY23 pKa = 10.78LNAVLDD29 pKa = 3.69WGEE32 pKa = 4.36SLFHH36 pKa = 6.37AVGRR40 pKa = 11.84EE41 pKa = 4.04VWRR44 pKa = 11.84HH45 pKa = 5.29LMRR48 pKa = 11.84QATLQIGQATRR59 pKa = 11.84AVAVRR64 pKa = 11.84STNEE68 pKa = 3.61LSHH71 pKa = 6.47TLAQIAEE78 pKa = 4.22NARR81 pKa = 11.84WALTSGPVHH90 pKa = 7.08IYY92 pKa = 10.89SSVQDD97 pKa = 3.52YY98 pKa = 10.9YY99 pKa = 11.36RR100 pKa = 11.84YY101 pKa = 10.31LPARR105 pKa = 11.84NPIQLRR111 pKa = 11.84QEE113 pKa = 3.8YY114 pKa = 9.42RR115 pKa = 11.84NRR117 pKa = 11.84GEE119 pKa = 4.36PPPSRR124 pKa = 11.84ADD126 pKa = 3.39FEE128 pKa = 4.47YY129 pKa = 10.79QEE131 pKa = 4.08NRR133 pKa = 11.84EE134 pKa = 4.12GQRR137 pKa = 11.84ARR139 pKa = 11.84RR140 pKa = 11.84EE141 pKa = 3.93LGYY144 pKa = 10.58DD145 pKa = 3.48EE146 pKa = 5.27PRR148 pKa = 11.84SGQYY152 pKa = 9.54VEE154 pKa = 5.75HH155 pKa = 5.94YY156 pKa = 6.84TAPGGAHH163 pKa = 5.58QRR165 pKa = 11.84VTQDD169 pKa = 2.16WMLPLILGLYY179 pKa = 10.53GDD181 pKa = 4.55ITPTWEE187 pKa = 3.77VEE189 pKa = 4.03LNKK192 pKa = 10.48LEE194 pKa = 4.31KK195 pKa = 11.11EE196 pKa = 3.78EE197 pKa = 5.3DD198 pKa = 3.85GPSKK202 pKa = 10.61KK203 pKa = 9.93KK204 pKa = 10.56ARR206 pKa = 11.84RR207 pKa = 11.84SMQKK211 pKa = 9.95NMPYY215 pKa = 10.19SRR217 pKa = 11.84SRR219 pKa = 11.84PQAPSKK225 pKa = 10.27RR226 pKa = 11.84RR227 pKa = 11.84SRR229 pKa = 11.84GARR232 pKa = 11.84SKK234 pKa = 11.07NRR236 pKa = 11.84AA237 pKa = 3.21

Molecular weight: 27.53 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

605

237

368

302.5

33.73

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.281 ± 1.17

1.488 ± 0.806

4.463 ± 0.589

5.785 ± 0.752

2.645 ± 0.061

8.099 ± 0.96

1.488 ± 0.566

3.306 ± 0.42

4.793 ± 0.769

8.264 ± 0.134

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.479 ± 0.2

4.959 ± 0.63

7.769 ± 0.323

4.959 ± 0.743

6.446 ± 2.681

7.107 ± 0.036

5.785 ± 0.849

7.603 ± 1.377

1.488 ± 0.566

4.793 ± 0.604
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski