Amino acid dipepetide frequency for Capybara microvirus Cap3_SP_475

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
3.169AlaAla: 3.169 ± 2.727
0.634AlaCys: 0.634 ± 0.629
1.901AlaAsp: 1.901 ± 1.221
0.0AlaGlu: 0.0 ± 0.0
1.267AlaPhe: 1.267 ± 0.621
1.901AlaGly: 1.901 ± 2.032
0.0AlaHis: 0.0 ± 0.0
2.535AlaIle: 2.535 ± 0.99
1.267AlaLys: 1.267 ± 0.888
3.802AlaLeu: 3.802 ± 0.82
0.0AlaMet: 0.0 ± 0.0
3.802AlaAsn: 3.802 ± 1.223
3.169AlaPro: 3.169 ± 1.897
2.535AlaGln: 2.535 ± 1.241
1.901AlaArg: 1.901 ± 0.943
6.337AlaSer: 6.337 ± 1.455
1.901AlaThr: 1.901 ± 0.436
4.436AlaVal: 4.436 ± 2.015
1.267AlaTrp: 1.267 ± 0.888
2.535AlaTyr: 2.535 ± 0.485
0.0AlaXaa: 0.0 ± 0.0
Cys
0.0CysAla: 0.0 ± 0.0
0.0CysCys: 0.0 ± 0.0
0.634CysAsp: 0.634 ± 0.782
0.634CysGlu: 0.634 ± 0.629
1.267CysPhe: 1.267 ± 1.259
0.634CysGly: 0.634 ± 0.629
0.0CysHis: 0.0 ± 0.0
0.0CysIle: 0.0 ± 0.0
1.901CysLys: 1.901 ± 0.826
1.901CysLeu: 1.901 ± 0.796
0.0CysMet: 0.0 ± 0.0
1.267CysAsn: 1.267 ± 0.564
0.0CysPro: 0.0 ± 0.0
1.267CysGln: 1.267 ± 0.642
1.267CysArg: 1.267 ± 0.564
1.267CysSer: 1.267 ± 0.888
0.0CysThr: 0.0 ± 0.0
0.634CysVal: 0.634 ± 0.444
0.0CysTrp: 0.0 ± 0.0
0.0CysTyr: 0.0 ± 0.0
0.0CysXaa: 0.0 ± 0.0
Asp
2.535AspAla: 2.535 ± 1.241
2.535AspCys: 2.535 ± 1.214
1.267AspAsp: 1.267 ± 0.888
1.267AspGlu: 1.267 ± 0.888
5.703AspPhe: 5.703 ± 1.949
2.535AspGly: 2.535 ± 0.754
0.634AspHis: 0.634 ± 0.836
3.802AspIle: 3.802 ± 2.25
3.802AspLys: 3.802 ± 1.925
5.703AspLeu: 5.703 ± 1.284
1.267AspMet: 1.267 ± 0.556
3.802AspAsn: 3.802 ± 0.848
0.634AspPro: 0.634 ± 0.677
1.267AspGln: 1.267 ± 0.888
0.634AspArg: 0.634 ± 0.444
3.169AspSer: 3.169 ± 1.094
1.267AspThr: 1.267 ± 0.621
3.802AspVal: 3.802 ± 1.206
0.634AspTrp: 0.634 ± 0.677
5.07AspTyr: 5.07 ± 1.226
0.0AspXaa: 0.0 ± 0.0
Glu
0.634GluAla: 0.634 ± 0.629
2.535GluCys: 2.535 ± 0.86
3.169GluAsp: 3.169 ± 1.321
1.901GluGlu: 1.901 ± 1.246
5.703GluPhe: 5.703 ± 1.557
1.267GluGly: 1.267 ± 0.916
0.634GluHis: 0.634 ± 0.444
2.535GluIle: 2.535 ± 0.896
1.267GluLys: 1.267 ± 0.888
3.802GluLeu: 3.802 ± 1.194
0.0GluMet: 0.0 ± 0.0
4.436GluAsn: 4.436 ± 1.423
1.267GluPro: 1.267 ± 1.01
4.436GluGln: 4.436 ± 3.09
1.267GluArg: 1.267 ± 0.621
1.901GluSer: 1.901 ± 0.953
3.802GluThr: 3.802 ± 1.681
1.901GluVal: 1.901 ± 0.995
0.634GluTrp: 0.634 ± 0.444
3.802GluTyr: 3.802 ± 1.427
0.0GluXaa: 0.0 ± 0.0
Phe
3.802PheAla: 3.802 ± 1.592
0.634PheCys: 0.634 ± 0.629
5.07PheAsp: 5.07 ± 2.044
2.535PheGlu: 2.535 ± 1.075
5.703PhePhe: 5.703 ± 1.272
2.535PheGly: 2.535 ± 1.777
0.634PheHis: 0.634 ± 0.629
5.703PheIle: 5.703 ± 2.388
10.139PheLys: 10.139 ± 2.722
4.436PheLeu: 4.436 ± 1.734
0.0PheMet: 0.0 ± 0.0
7.605PheAsn: 7.605 ± 2.818
1.267PhePro: 1.267 ± 0.888
4.436PheGln: 4.436 ± 2.131
1.267PheArg: 1.267 ± 1.259
3.169PheSer: 3.169 ± 1.846
4.436PheThr: 4.436 ± 1.807
2.535PheVal: 2.535 ± 1.16
0.0PheTrp: 0.0 ± 0.0
3.802PheTyr: 3.802 ± 1.636
0.0PheXaa: 0.0 ± 0.0
Gly
3.169GlyAla: 3.169 ± 1.954
0.0GlyCys: 0.0 ± 0.0
3.169GlyAsp: 3.169 ± 1.013
1.901GlyGlu: 1.901 ± 0.864
3.169GlyPhe: 3.169 ± 0.868
1.267GlyGly: 1.267 ± 0.888
0.0GlyHis: 0.0 ± 0.0
3.169GlyIle: 3.169 ± 1.241
1.267GlyLys: 1.267 ± 0.734
5.07GlyLeu: 5.07 ± 0.97
0.634GlyMet: 0.634 ± 0.592
5.703GlyAsn: 5.703 ± 1.73
1.267GlyPro: 1.267 ± 0.564
0.634GlyGln: 0.634 ± 0.688
0.634GlyArg: 0.634 ± 0.629
2.535GlySer: 2.535 ± 1.16
0.634GlyThr: 0.634 ± 0.444
1.901GlyVal: 1.901 ± 0.864
0.0GlyTrp: 0.0 ± 0.0
1.267GlyTyr: 1.267 ± 0.888
0.0GlyXaa: 0.0 ± 0.0
His
0.0HisAla: 0.0 ± 0.0
0.0HisCys: 0.0 ± 0.0
0.634HisAsp: 0.634 ± 0.444
1.901HisGlu: 1.901 ± 0.841
0.0HisPhe: 0.0 ± 0.0
1.267HisGly: 1.267 ± 0.564
0.0HisHis: 0.0 ± 0.0
1.901HisIle: 1.901 ± 1.055
0.634HisLys: 0.634 ± 0.444
1.901HisLeu: 1.901 ± 0.818
0.0HisMet: 0.0 ± 0.0
3.169HisAsn: 3.169 ± 1.904
0.0HisPro: 0.0 ± 0.0
0.0HisGln: 0.0 ± 0.0
0.634HisArg: 0.634 ± 0.444
0.634HisSer: 0.634 ± 0.444
0.634HisThr: 0.634 ± 0.677
0.0HisVal: 0.0 ± 0.0
0.634HisTrp: 0.634 ± 0.444
1.901HisTyr: 1.901 ± 0.436
0.0HisXaa: 0.0 ± 0.0
Ile
3.169IleAla: 3.169 ± 1.639
0.634IleCys: 0.634 ± 0.629
5.703IleAsp: 5.703 ± 1.448
3.802IleGlu: 3.802 ± 0.878
3.169IlePhe: 3.169 ± 2.331
3.169IleGly: 3.169 ± 1.856
1.901IleHis: 1.901 ± 1.055
5.07IleIle: 5.07 ± 2.519
8.872IleLys: 8.872 ± 4.769
5.07IleLeu: 5.07 ± 2.111
1.267IleMet: 1.267 ± 0.888
5.703IleAsn: 5.703 ± 1.11
6.337IlePro: 6.337 ± 1.814
2.535IleGln: 2.535 ± 1.241
1.267IleArg: 1.267 ± 0.842
6.971IleSer: 6.971 ± 1.891
6.337IleThr: 6.337 ± 2.182
1.267IleVal: 1.267 ± 0.842
0.634IleTrp: 0.634 ± 0.444
0.634IleTyr: 0.634 ± 0.629
0.0IleXaa: 0.0 ± 0.0
Lys
3.802LysAla: 3.802 ± 1.428
1.267LysCys: 1.267 ± 0.564
3.169LysAsp: 3.169 ± 0.497
3.802LysGlu: 3.802 ± 2.282
7.605LysPhe: 7.605 ± 2.198
1.267LysGly: 1.267 ± 0.965
1.267LysHis: 1.267 ± 0.888
3.802LysIle: 3.802 ± 2.964
4.436LysLys: 4.436 ± 2.342
8.872LysLeu: 8.872 ± 1.928
0.634LysMet: 0.634 ± 0.836
4.436LysAsn: 4.436 ± 2.383
1.267LysPro: 1.267 ± 0.621
6.337LysGln: 6.337 ± 1.766
5.07LysArg: 5.07 ± 1.78
4.436LysSer: 4.436 ± 1.726
4.436LysThr: 4.436 ± 0.983
2.535LysVal: 2.535 ± 1.127
0.634LysTrp: 0.634 ± 0.677
6.971LysTyr: 6.971 ± 3.48
0.0LysXaa: 0.0 ± 0.0
Leu
4.436LeuAla: 4.436 ± 1.419
1.267LeuCys: 1.267 ± 0.75
5.07LeuAsp: 5.07 ± 1.65
8.238LeuGlu: 8.238 ± 2.396
3.169LeuPhe: 3.169 ± 0.497
5.07LeuGly: 5.07 ± 2.131
1.267LeuHis: 1.267 ± 0.564
3.169LeuIle: 3.169 ± 1.046
6.971LeuLys: 6.971 ± 1.691
4.436LeuLeu: 4.436 ± 1.441
2.535LeuMet: 2.535 ± 1.078
10.139LeuAsn: 10.139 ± 2.784
5.07LeuPro: 5.07 ± 1.543
6.337LeuGln: 6.337 ± 1.394
3.169LeuArg: 3.169 ± 1.475
8.872LeuSer: 8.872 ± 2.696
6.337LeuThr: 6.337 ± 1.551
1.901LeuVal: 1.901 ± 1.055
0.0LeuTrp: 0.0 ± 0.0
1.901LeuTyr: 1.901 ± 1.109
0.0LeuXaa: 0.0 ± 0.0
Met
1.901MetAla: 1.901 ± 0.841
0.634MetCys: 0.634 ± 0.444
1.267MetAsp: 1.267 ± 0.621
0.0MetGlu: 0.0 ± 0.0
1.267MetPhe: 1.267 ± 0.842
0.0MetGly: 0.0 ± 0.0
0.634MetHis: 0.634 ± 0.444
0.634MetIle: 0.634 ± 0.677
1.267MetLys: 1.267 ± 1.01
1.901MetLeu: 1.901 ± 1.495
0.0MetMet: 0.0 ± 0.0
0.634MetAsn: 0.634 ± 0.677
1.267MetPro: 1.267 ± 0.888
0.0MetGln: 0.0 ± 0.0
0.0MetArg: 0.0 ± 0.0
1.267MetSer: 1.267 ± 0.888
0.634MetThr: 0.634 ± 0.688
0.634MetVal: 0.634 ± 0.836
0.0MetTrp: 0.0 ± 0.0
0.0MetTyr: 0.0 ± 0.0
0.0MetXaa: 0.0 ± 0.0
Asn
3.169AsnAla: 3.169 ± 1.013
0.0AsnCys: 0.0 ± 0.0
6.337AsnAsp: 6.337 ± 1.906
1.901AsnGlu: 1.901 ± 0.436
5.07AsnPhe: 5.07 ± 1.665
3.802AsnGly: 3.802 ± 0.849
1.901AsnHis: 1.901 ± 0.841
8.238AsnIle: 8.238 ± 2.404
8.872AsnLys: 8.872 ± 1.678
12.041AsnLeu: 12.041 ± 1.504
0.634AsnMet: 0.634 ± 0.444
9.506AsnAsn: 9.506 ± 3.73
3.169AsnPro: 3.169 ± 0.933
3.802AsnGln: 3.802 ± 1.604
2.535AsnArg: 2.535 ± 0.887
10.773AsnSer: 10.773 ± 2.46
7.605AsnThr: 7.605 ± 3.256
3.169AsnVal: 3.169 ± 1.371
0.634AsnTrp: 0.634 ± 0.629
5.703AsnTyr: 5.703 ± 1.683
0.0AsnXaa: 0.0 ± 0.0
Pro
3.169ProAla: 3.169 ± 1.046
0.634ProCys: 0.634 ± 0.629
0.634ProAsp: 0.634 ± 0.444
3.169ProGlu: 3.169 ± 1.611
0.634ProPhe: 0.634 ± 0.688
2.535ProGly: 2.535 ± 1.214
1.267ProHis: 1.267 ± 0.734
1.901ProIle: 1.901 ± 1.333
2.535ProLys: 2.535 ± 1.127
5.703ProLeu: 5.703 ± 0.712
0.634ProMet: 0.634 ± 0.444
2.535ProAsn: 2.535 ± 1.127
1.267ProPro: 1.267 ± 0.888
1.901ProGln: 1.901 ± 1.333
2.535ProArg: 2.535 ± 1.713
6.337ProSer: 6.337 ± 2.086
2.535ProThr: 2.535 ± 1.16
3.169ProVal: 3.169 ± 0.822
0.0ProTrp: 0.0 ± 0.0
0.634ProTyr: 0.634 ± 0.677
0.0ProXaa: 0.0 ± 0.0
Gln
3.169GlnAla: 3.169 ± 1.013
0.634GlnCys: 0.634 ± 0.444
0.0GlnAsp: 0.0 ± 0.0
3.169GlnGlu: 3.169 ± 1.091
3.802GlnPhe: 3.802 ± 1.115
1.267GlnGly: 1.267 ± 0.888
0.634GlnHis: 0.634 ± 0.677
4.436GlnIle: 4.436 ± 1.0
2.535GlnLys: 2.535 ± 1.426
5.07GlnLeu: 5.07 ± 1.332
2.535GlnMet: 2.535 ± 2.078
8.872GlnAsn: 8.872 ± 3.897
1.267GlnPro: 1.267 ± 0.888
3.802GlnGln: 3.802 ± 1.713
1.901GlnArg: 1.901 ± 1.333
2.535GlnSer: 2.535 ± 1.232
3.169GlnThr: 3.169 ± 1.144
0.634GlnVal: 0.634 ± 0.677
0.0GlnTrp: 0.0 ± 0.0
1.901GlnTyr: 1.901 ± 2.032
0.0GlnXaa: 0.0 ± 0.0
Arg
0.634ArgAla: 0.634 ± 0.444
0.634ArgCys: 0.634 ± 0.629
1.267ArgAsp: 1.267 ± 0.564
0.0ArgGlu: 0.0 ± 0.0
2.535ArgPhe: 2.535 ± 1.127
2.535ArgGly: 2.535 ± 1.16
0.634ArgHis: 0.634 ± 0.836
1.901ArgIle: 1.901 ± 1.106
1.901ArgLys: 1.901 ± 0.436
5.07ArgLeu: 5.07 ± 1.774
0.0ArgMet: 0.0 ± 0.0
4.436ArgAsn: 4.436 ± 0.68
1.901ArgPro: 1.901 ± 1.109
1.267ArgGln: 1.267 ± 0.642
2.535ArgArg: 2.535 ± 1.008
1.267ArgSer: 1.267 ± 0.888
1.267ArgThr: 1.267 ± 0.564
1.267ArgVal: 1.267 ± 0.564
0.0ArgTrp: 0.0 ± 0.0
1.901ArgTyr: 1.901 ± 0.943
0.0ArgXaa: 0.0 ± 0.0
Ser
3.169SerAla: 3.169 ± 1.409
0.634SerCys: 0.634 ± 0.629
3.802SerAsp: 3.802 ± 1.223
5.703SerGlu: 5.703 ± 1.685
8.872SerPhe: 8.872 ± 1.787
1.901SerGly: 1.901 ± 1.109
1.901SerHis: 1.901 ± 1.333
7.605SerIle: 7.605 ± 1.498
7.605SerLys: 7.605 ± 2.366
3.169SerLeu: 3.169 ± 0.746
1.267SerMet: 1.267 ± 0.83
6.337SerAsn: 6.337 ± 2.132
5.07SerPro: 5.07 ± 1.747
1.267SerGln: 1.267 ± 0.642
3.169SerArg: 3.169 ± 1.565
10.139SerSer: 10.139 ± 0.828
1.267SerThr: 1.267 ± 0.982
2.535SerVal: 2.535 ± 1.232
1.267SerTrp: 1.267 ± 1.259
5.703SerTyr: 5.703 ± 1.535
0.0SerXaa: 0.0 ± 0.0
Thr
2.535ThrAla: 2.535 ± 0.99
0.0ThrCys: 0.0 ± 0.0
2.535ThrAsp: 2.535 ± 1.193
1.267ThrGlu: 1.267 ± 0.888
3.802ThrPhe: 3.802 ± 1.48
2.535ThrGly: 2.535 ± 1.777
1.901ThrHis: 1.901 ± 0.436
7.605ThrIle: 7.605 ± 1.637
0.634ThrLys: 0.634 ± 0.444
6.971ThrLeu: 6.971 ± 1.518
0.634ThrMet: 0.634 ± 0.444
6.337ThrAsn: 6.337 ± 2.209
3.169ThrPro: 3.169 ± 1.591
1.901ThrGln: 1.901 ± 1.495
0.634ThrArg: 0.634 ± 0.444
5.07ThrSer: 5.07 ± 1.979
1.901ThrThr: 1.901 ± 0.841
3.802ThrVal: 3.802 ± 1.634
0.634ThrTrp: 0.634 ± 0.688
1.901ThrTyr: 1.901 ± 1.109
0.0ThrXaa: 0.0 ± 0.0
Val
0.634ValAla: 0.634 ± 0.444
0.0ValCys: 0.0 ± 0.0
1.267ValAsp: 1.267 ± 0.734
0.0ValGlu: 0.0 ± 0.0
3.802ValPhe: 3.802 ± 1.502
0.634ValGly: 0.634 ± 0.444
0.0ValHis: 0.0 ± 0.0
3.802ValIle: 3.802 ± 2.472
4.436ValLys: 4.436 ± 3.186
1.901ValLeu: 1.901 ± 0.995
0.634ValMet: 0.634 ± 0.677
3.169ValAsn: 3.169 ± 1.174
3.802ValPro: 3.802 ± 1.592
2.535ValGln: 2.535 ± 0.887
1.901ValArg: 1.901 ± 0.928
3.169ValSer: 3.169 ± 1.241
3.802ValThr: 3.802 ± 1.987
0.634ValVal: 0.634 ± 0.444
0.634ValTrp: 0.634 ± 0.444
3.802ValTyr: 3.802 ± 1.616
0.0ValXaa: 0.0 ± 0.0
Trp
0.0TrpAla: 0.0 ± 0.0
0.0TrpCys: 0.0 ± 0.0
0.634TrpAsp: 0.634 ± 0.629
1.267TrpGlu: 1.267 ± 0.642
0.634TrpPhe: 0.634 ± 0.629
0.0TrpGly: 0.0 ± 0.0
0.0TrpHis: 0.0 ± 0.0
0.634TrpIle: 0.634 ± 0.444
0.634TrpLys: 0.634 ± 0.444
0.0TrpLeu: 0.0 ± 0.0
0.0TrpMet: 0.0 ± 0.0
1.267TrpAsn: 1.267 ± 0.621
0.634TrpPro: 0.634 ± 0.444
0.634TrpGln: 0.634 ± 0.677
0.0TrpArg: 0.0 ± 0.0
1.267TrpSer: 1.267 ± 0.564
0.634TrpThr: 0.634 ± 0.444
0.0TrpVal: 0.0 ± 0.0
0.0TrpTrp: 0.0 ± 0.0
0.0TrpTyr: 0.0 ± 0.0
0.0TrpXaa: 0.0 ± 0.0
Tyr
1.267TyrAla: 1.267 ± 0.621
0.0TyrCys: 0.0 ± 0.0
3.802TyrAsp: 3.802 ± 1.394
4.436TyrGlu: 4.436 ± 1.941
2.535TyrPhe: 2.535 ± 1.383
1.267TyrGly: 1.267 ± 0.734
0.634TyrHis: 0.634 ± 0.629
5.07TyrIle: 5.07 ± 1.862
5.07TyrLys: 5.07 ± 2.28
2.535TyrLeu: 2.535 ± 1.214
0.634TyrMet: 0.634 ± 1.297
5.703TyrAsn: 5.703 ± 2.702
1.901TyrPro: 1.901 ± 0.943
4.436TyrGln: 4.436 ± 1.949
0.634TyrArg: 0.634 ± 0.444
1.267TyrSer: 1.267 ± 1.075
3.169TyrThr: 3.169 ± 0.822
3.802TyrVal: 3.802 ± 0.878
0.634TyrTrp: 0.634 ± 0.444
6.337TyrTyr: 6.337 ± 2.452
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 6 proteins (1579 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski