Amino acid dipepetide frequency for Fusarium poae victorivirus 1

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
17.199AlaAla: 17.199 ± 4.045
0.614AlaCys: 0.614 ± 0.472
4.3AlaAsp: 4.3 ± 2.451
4.914AlaGlu: 4.914 ± 1.978
4.3AlaPhe: 4.3 ± 2.347
11.671AlaGly: 11.671 ± 2.539
1.843AlaHis: 1.843 ± 1.461
4.3AlaIle: 4.3 ± 0.531
3.071AlaLys: 3.071 ± 0.517
9.828AlaLeu: 9.828 ± 3.956
2.457AlaMet: 2.457 ± 0.287
4.914AlaAsn: 4.914 ± 1.978
6.143AlaPro: 6.143 ± 4.872
3.686AlaGln: 3.686 ± 1.963
6.143AlaArg: 6.143 ± 0.074
4.914AlaSer: 4.914 ± 1.019
8.6AlaThr: 8.6 ± 0.103
7.371AlaVal: 7.371 ± 0.088
3.071AlaTrp: 3.071 ± 0.517
4.3AlaTyr: 4.3 ± 0.428
0.0AlaXaa: 0.0 ± 0.0
Cys
0.0CysAla: 0.0 ± 0.0
0.0CysCys: 0.0 ± 0.0
1.229CysAsp: 1.229 ± 0.015
1.229CysGlu: 1.229 ± 0.945
0.0CysPhe: 0.0 ± 0.0
0.614CysGly: 0.614 ± 0.472
0.0CysHis: 0.0 ± 0.0
1.229CysIle: 1.229 ± 0.945
0.614CysLys: 0.614 ± 0.472
0.0CysLeu: 0.0 ± 0.0
0.0CysMet: 0.0 ± 0.0
0.0CysAsn: 0.0 ± 0.0
0.0CysPro: 0.0 ± 0.0
0.0CysGln: 0.0 ± 0.0
0.0CysArg: 0.0 ± 0.0
1.843CysSer: 1.843 ± 1.417
1.229CysThr: 1.229 ± 0.945
0.614CysVal: 0.614 ± 0.487
0.0CysTrp: 0.0 ± 0.0
0.614CysTyr: 0.614 ± 0.487
0.0CysXaa: 0.0 ± 0.0
Asp
5.528AspAla: 5.528 ± 0.413
1.229AspCys: 1.229 ± 0.945
7.371AspAsp: 7.371 ± 1.048
3.686AspGlu: 3.686 ± 0.044
2.457AspPhe: 2.457 ± 0.93
3.071AspGly: 3.071 ± 1.403
2.457AspHis: 2.457 ± 0.029
1.843AspIle: 1.843 ± 0.502
0.614AspLys: 0.614 ± 0.472
4.914AspLeu: 4.914 ± 1.86
0.614AspMet: 0.614 ± 0.487
2.457AspAsn: 2.457 ± 1.949
1.843AspPro: 1.843 ± 0.502
0.0AspGln: 0.0 ± 0.0
4.914AspArg: 4.914 ± 1.86
3.071AspSer: 3.071 ± 0.443
4.3AspThr: 4.3 ± 0.428
4.914AspVal: 4.914 ± 0.901
0.614AspTrp: 0.614 ± 0.487
1.843AspTyr: 1.843 ± 0.458
0.0AspXaa: 0.0 ± 0.0
Glu
6.757GluAla: 6.757 ± 0.561
1.843GluCys: 1.843 ± 1.417
0.614GluAsp: 0.614 ± 0.472
3.071GluGlu: 3.071 ± 1.403
2.457GluPhe: 2.457 ± 0.93
4.3GluGly: 4.3 ± 2.451
2.457GluHis: 2.457 ± 0.029
1.229GluIle: 1.229 ± 0.015
1.229GluLys: 1.229 ± 0.945
3.071GluLeu: 3.071 ± 0.517
0.0GluMet: 0.0 ± 0.0
0.614GluAsn: 0.614 ± 0.472
1.229GluPro: 1.229 ± 0.015
1.229GluGln: 1.229 ± 0.945
2.457GluArg: 2.457 ± 1.949
3.071GluSer: 3.071 ± 0.443
1.229GluThr: 1.229 ± 0.945
3.071GluVal: 3.071 ± 0.443
0.614GluTrp: 0.614 ± 0.472
1.843GluTyr: 1.843 ± 1.417
0.0GluXaa: 0.0 ± 0.0
Phe
2.457PheAla: 2.457 ± 0.989
0.0PheCys: 0.0 ± 0.0
3.686PheAsp: 3.686 ± 0.915
3.071PheGlu: 3.071 ± 0.517
0.614PhePhe: 0.614 ± 0.472
3.071PheGly: 3.071 ± 0.443
0.614PheHis: 0.614 ± 0.472
1.229PheIle: 1.229 ± 0.015
1.843PheLys: 1.843 ± 0.458
1.843PheLeu: 1.843 ± 1.417
0.614PheMet: 0.614 ± 0.487
1.229PheAsn: 1.229 ± 0.015
2.457PhePro: 2.457 ± 0.93
0.0PheGln: 0.0 ± 0.0
1.229PheArg: 1.229 ± 0.974
4.3PheSer: 4.3 ± 0.531
1.229PheThr: 1.229 ± 0.974
0.0PheVal: 0.0 ± 0.0
0.614PheTrp: 0.614 ± 0.487
1.843PheTyr: 1.843 ± 0.502
0.0PheXaa: 0.0 ± 0.0
Gly
6.143GlyAla: 6.143 ± 4.872
0.614GlyCys: 0.614 ± 0.472
4.914GlyAsp: 4.914 ± 0.059
4.3GlyGlu: 4.3 ± 1.388
3.071GlyPhe: 3.071 ± 2.436
7.371GlyGly: 7.371 ± 1.048
2.457GlyHis: 2.457 ± 0.029
3.686GlyIle: 3.686 ± 0.044
2.457GlyLys: 2.457 ± 1.89
5.528GlyLeu: 5.528 ± 1.506
0.614GlyMet: 0.614 ± 0.487
3.686GlyAsn: 3.686 ± 0.915
4.3GlyPro: 4.3 ± 2.451
3.686GlyGln: 3.686 ± 1.963
6.143GlyArg: 6.143 ± 1.033
4.3GlySer: 4.3 ± 2.347
5.528GlyThr: 5.528 ± 1.506
9.214GlyVal: 9.214 ± 0.59
2.457GlyTrp: 2.457 ± 0.029
1.843GlyTyr: 1.843 ± 0.458
0.0GlyXaa: 0.0 ± 0.0
His
0.0HisAla: 0.0 ± 0.0
0.614HisCys: 0.614 ± 0.487
0.614HisAsp: 0.614 ± 0.472
1.229HisGlu: 1.229 ± 0.015
0.614HisPhe: 0.614 ± 0.487
1.843HisGly: 1.843 ± 0.502
0.0HisHis: 0.0 ± 0.0
0.0HisIle: 0.0 ± 0.0
0.614HisLys: 0.614 ± 0.472
2.457HisLeu: 2.457 ± 0.989
0.0HisMet: 0.0 ± 0.0
1.843HisAsn: 1.843 ± 1.461
1.843HisPro: 1.843 ± 0.502
1.843HisGln: 1.843 ± 0.458
2.457HisArg: 2.457 ± 0.93
1.843HisSer: 1.843 ± 0.458
2.457HisThr: 2.457 ± 0.93
1.843HisVal: 1.843 ± 1.417
1.229HisTrp: 1.229 ± 0.945
1.843HisTyr: 1.843 ± 0.458
0.0HisXaa: 0.0 ± 0.0
Ile
2.457IleAla: 2.457 ± 0.029
0.0IleCys: 0.0 ± 0.0
2.457IleAsp: 2.457 ± 0.93
2.457IleGlu: 2.457 ± 0.029
1.229IlePhe: 1.229 ± 0.015
1.843IleGly: 1.843 ± 1.461
1.229IleHis: 1.229 ± 0.015
0.0IleIle: 0.0 ± 0.0
0.0IleLys: 0.0 ± 0.0
1.843IleLeu: 1.843 ± 0.458
0.614IleMet: 0.614 ± 0.472
2.457IleAsn: 2.457 ± 0.029
2.457IlePro: 2.457 ± 1.949
1.229IleGln: 1.229 ± 0.974
1.229IleArg: 1.229 ± 0.015
4.914IleSer: 4.914 ± 0.901
1.229IleThr: 1.229 ± 0.945
2.457IleVal: 2.457 ± 0.93
0.0IleTrp: 0.0 ± 0.0
1.229IleTyr: 1.229 ± 0.945
0.0IleXaa: 0.0 ± 0.0
Lys
3.071LysAla: 3.071 ± 1.403
0.0LysCys: 0.0 ± 0.0
0.614LysAsp: 0.614 ± 0.472
0.0LysGlu: 0.0 ± 0.0
0.0LysPhe: 0.0 ± 0.0
1.229LysGly: 1.229 ± 0.945
1.229LysHis: 1.229 ± 0.015
1.229LysIle: 1.229 ± 0.945
0.614LysLys: 0.614 ± 0.472
4.914LysLeu: 4.914 ± 3.779
1.229LysMet: 1.229 ± 0.015
1.229LysAsn: 1.229 ± 0.945
0.614LysPro: 0.614 ± 0.472
0.614LysGln: 0.614 ± 0.472
4.3LysArg: 4.3 ± 1.388
1.843LysSer: 1.843 ± 1.417
1.229LysThr: 1.229 ± 0.015
0.614LysVal: 0.614 ± 0.487
0.614LysTrp: 0.614 ± 0.487
1.229LysTyr: 1.229 ± 0.015
0.0LysXaa: 0.0 ± 0.0
Leu
9.214LeuAla: 9.214 ± 1.55
1.843LeuCys: 1.843 ± 0.458
6.143LeuAsp: 6.143 ± 1.845
4.914LeuGlu: 4.914 ± 2.82
1.843LeuPhe: 1.843 ± 0.502
6.143LeuGly: 6.143 ± 1.033
1.229LeuHis: 1.229 ± 0.945
1.229LeuIle: 1.229 ± 0.015
3.686LeuLys: 3.686 ± 0.915
7.985LeuLeu: 7.985 ± 6.142
1.229LeuMet: 1.229 ± 0.945
1.843LeuAsn: 1.843 ± 1.417
6.143LeuPro: 6.143 ± 0.886
1.229LeuGln: 1.229 ± 0.945
9.828LeuArg: 9.828 ± 0.118
6.757LeuSer: 6.757 ± 0.561
6.143LeuThr: 6.143 ± 0.886
4.914LeuVal: 4.914 ± 1.86
1.229LeuTrp: 1.229 ± 0.015
3.686LeuTyr: 3.686 ± 0.915
0.0LeuXaa: 0.0 ± 0.0
Met
1.229MetAla: 1.229 ± 0.015
0.0MetCys: 0.0 ± 0.0
0.614MetAsp: 0.614 ± 0.487
0.0MetGlu: 0.0 ± 0.0
0.0MetPhe: 0.0 ± 0.0
0.0MetGly: 0.0 ± 0.0
0.0MetHis: 0.0 ± 0.0
0.614MetIle: 0.614 ± 0.472
0.614MetLys: 0.614 ± 0.472
0.614MetLeu: 0.614 ± 0.472
0.614MetMet: 0.614 ± 0.487
1.843MetAsn: 1.843 ± 0.458
0.614MetPro: 0.614 ± 0.487
0.0MetGln: 0.0 ± 0.0
2.457MetArg: 2.457 ± 0.989
1.843MetSer: 1.843 ± 0.458
0.0MetThr: 0.0 ± 0.0
1.229MetVal: 1.229 ± 0.015
0.0MetTrp: 0.0 ± 0.0
0.0MetTyr: 0.0 ± 0.0
0.0MetXaa: 0.0 ± 0.0
Asn
3.071AsnAla: 3.071 ± 1.476
0.0AsnCys: 0.0 ± 0.0
1.843AsnAsp: 1.843 ± 0.502
0.0AsnGlu: 0.0 ± 0.0
3.071AsnPhe: 3.071 ± 1.476
4.3AsnGly: 4.3 ± 0.531
0.614AsnHis: 0.614 ± 0.487
1.843AsnIle: 1.843 ± 0.502
0.614AsnLys: 0.614 ± 0.472
0.614AsnLeu: 0.614 ± 0.472
0.614AsnMet: 0.614 ± 0.487
1.229AsnAsn: 1.229 ± 0.015
3.686AsnPro: 3.686 ± 0.044
1.843AsnGln: 1.843 ± 1.461
1.843AsnArg: 1.843 ± 0.458
4.3AsnSer: 4.3 ± 1.388
1.229AsnThr: 1.229 ± 0.015
1.229AsnVal: 1.229 ± 0.974
0.614AsnTrp: 0.614 ± 0.472
0.614AsnTyr: 0.614 ± 0.487
0.0AsnXaa: 0.0 ± 0.0
Pro
11.671ProAla: 11.671 ± 7.337
0.614ProCys: 0.614 ± 0.487
1.843ProAsp: 1.843 ± 1.417
3.071ProGlu: 3.071 ± 0.517
0.614ProPhe: 0.614 ± 0.472
4.914ProGly: 4.914 ± 1.978
1.229ProHis: 1.229 ± 0.015
2.457ProIle: 2.457 ± 0.989
3.686ProLys: 3.686 ± 2.835
7.371ProLeu: 7.371 ± 1.048
0.0ProMet: 0.0 ± 0.0
0.614ProAsn: 0.614 ± 0.487
10.442ProPro: 10.442 ± 7.322
3.686ProGln: 3.686 ± 1.004
1.843ProArg: 1.843 ± 0.502
3.071ProSer: 3.071 ± 0.443
5.528ProThr: 5.528 ± 0.546
4.914ProVal: 4.914 ± 1.978
0.0ProTrp: 0.0 ± 0.0
1.843ProTyr: 1.843 ± 1.461
0.0ProXaa: 0.0 ± 0.0
Gln
4.3GlnAla: 4.3 ± 1.491
0.614GlnCys: 0.614 ± 0.472
1.229GlnAsp: 1.229 ± 0.974
0.0GlnGlu: 0.0 ± 0.0
1.843GlnPhe: 1.843 ± 0.458
3.071GlnGly: 3.071 ± 1.476
0.614GlnHis: 0.614 ± 0.472
2.457GlnIle: 2.457 ± 0.029
0.0GlnLys: 0.0 ± 0.0
1.843GlnLeu: 1.843 ± 0.502
0.0GlnMet: 0.0 ± 0.0
0.0GlnAsn: 0.0 ± 0.0
2.457GlnPro: 2.457 ± 1.949
0.614GlnGln: 0.614 ± 0.487
1.229GlnArg: 1.229 ± 0.945
4.3GlnSer: 4.3 ± 0.428
1.229GlnThr: 1.229 ± 0.015
0.0GlnVal: 0.0 ± 0.0
0.0GlnTrp: 0.0 ± 0.0
0.614GlnTyr: 0.614 ± 0.472
0.0GlnXaa: 0.0 ± 0.0
Arg
9.214ArgAla: 9.214 ± 0.369
0.614ArgCys: 0.614 ± 0.472
6.143ArgAsp: 6.143 ± 3.765
0.614ArgGlu: 0.614 ± 0.487
1.843ArgPhe: 1.843 ± 0.502
6.757ArgGly: 6.757 ± 0.561
3.071ArgHis: 3.071 ± 0.443
1.843ArgIle: 1.843 ± 0.458
0.0ArgLys: 0.0 ± 0.0
6.757ArgLeu: 6.757 ± 0.399
0.614ArgMet: 0.614 ± 0.472
0.614ArgAsn: 0.614 ± 0.487
4.3ArgPro: 4.3 ± 0.531
0.614ArgGln: 0.614 ± 0.487
7.371ArgArg: 7.371 ± 0.871
4.914ArgSer: 4.914 ± 1.019
5.528ArgThr: 5.528 ± 2.465
7.371ArgVal: 7.371 ± 2.79
1.229ArgTrp: 1.229 ± 0.945
2.457ArgTyr: 2.457 ± 0.029
0.0ArgXaa: 0.0 ± 0.0
Ser
6.143SerAla: 6.143 ± 0.886
0.0SerCys: 0.0 ± 0.0
2.457SerAsp: 2.457 ± 0.93
0.0SerGlu: 0.0 ± 0.0
2.457SerPhe: 2.457 ± 0.93
9.214SerGly: 9.214 ± 2.509
2.457SerHis: 2.457 ± 0.029
2.457SerIle: 2.457 ± 0.93
1.229SerLys: 1.229 ± 0.945
5.528SerLeu: 5.528 ± 2.333
0.0SerMet: 0.0 ± 0.0
2.457SerAsn: 2.457 ± 0.989
7.985SerPro: 7.985 ± 0.384
3.686SerGln: 3.686 ± 2.835
3.686SerArg: 3.686 ± 1.875
11.671SerSer: 11.671 ± 2.539
5.528SerThr: 5.528 ± 0.413
11.057SerVal: 11.057 ± 2.052
1.229SerTrp: 1.229 ± 0.015
4.3SerTyr: 4.3 ± 1.388
0.0SerXaa: 0.0 ± 0.0
Thr
9.828ThrAla: 9.828 ± 2.997
0.0ThrCys: 0.0 ± 0.0
5.528ThrAsp: 5.528 ± 0.413
1.843ThrGlu: 1.843 ± 0.458
1.229ThrPhe: 1.229 ± 0.945
1.843ThrGly: 1.843 ± 0.502
1.229ThrHis: 1.229 ± 0.945
1.229ThrIle: 1.229 ± 0.015
1.843ThrLys: 1.843 ± 0.458
6.143ThrLeu: 6.143 ± 1.845
1.229ThrMet: 1.229 ± 0.945
3.686ThrAsn: 3.686 ± 1.963
3.686ThrPro: 3.686 ± 0.915
0.614ThrGln: 0.614 ± 0.487
4.914ThrArg: 4.914 ± 0.059
6.757ThrSer: 6.757 ± 0.561
10.442ThrThr: 10.442 ± 0.605
3.686ThrVal: 3.686 ± 0.044
0.0ThrTrp: 0.0 ± 0.0
1.843ThrTyr: 1.843 ± 0.458
0.0ThrXaa: 0.0 ± 0.0
Val
9.214ValAla: 9.214 ± 0.59
0.0ValCys: 0.0 ± 0.0
1.843ValAsp: 1.843 ± 1.461
5.528ValGlu: 5.528 ± 1.373
3.071ValPhe: 3.071 ± 2.436
7.371ValGly: 7.371 ± 1.831
2.457ValHis: 2.457 ± 0.93
1.843ValIle: 1.843 ± 0.458
2.457ValLys: 2.457 ± 1.89
9.828ValLeu: 9.828 ± 4.68
0.614ValMet: 0.614 ± 0.316
1.843ValAsn: 1.843 ± 0.458
5.528ValPro: 5.528 ± 3.425
1.229ValGln: 1.229 ± 0.015
6.143ValArg: 6.143 ± 1.845
6.757ValSer: 6.757 ± 0.561
2.457ValThr: 2.457 ± 0.029
9.828ValVal: 9.828 ± 2.037
0.614ValTrp: 0.614 ± 0.472
1.229ValTyr: 1.229 ± 0.015
0.0ValXaa: 0.0 ± 0.0
Trp
1.843TrpAla: 1.843 ± 0.458
0.0TrpCys: 0.0 ± 0.0
3.071TrpAsp: 3.071 ± 0.517
0.614TrpGlu: 0.614 ± 0.487
0.0TrpPhe: 0.0 ± 0.0
1.229TrpGly: 1.229 ± 0.945
0.0TrpHis: 0.0 ± 0.0
0.614TrpIle: 0.614 ± 0.487
0.0TrpLys: 0.0 ± 0.0
2.457TrpLeu: 2.457 ± 0.93
0.0TrpMet: 0.0 ± 0.0
0.0TrpAsn: 0.0 ± 0.0
0.0TrpPro: 0.0 ± 0.0
0.0TrpGln: 0.0 ± 0.0
1.229TrpArg: 1.229 ± 0.015
0.614TrpSer: 0.614 ± 0.472
0.614TrpThr: 0.614 ± 0.487
1.843TrpVal: 1.843 ± 0.458
0.0TrpTrp: 0.0 ± 0.0
0.0TrpTyr: 0.0 ± 0.0
0.0TrpXaa: 0.0 ± 0.0
Tyr
4.3TyrAla: 4.3 ± 2.451
0.614TyrCys: 0.614 ± 0.472
1.229TyrAsp: 1.229 ± 0.945
1.843TyrGlu: 1.843 ± 0.458
1.229TyrPhe: 1.229 ± 0.015
2.457TyrGly: 2.457 ± 0.029
0.0TyrHis: 0.0 ± 0.0
0.0TyrIle: 0.0 ± 0.0
1.229TyrLys: 1.229 ± 0.974
3.686TyrLeu: 3.686 ± 0.915
0.614TyrMet: 0.614 ± 0.487
0.614TyrAsn: 0.614 ± 0.487
3.686TyrPro: 3.686 ± 0.044
0.614TyrGln: 0.614 ± 0.487
2.457TyrArg: 2.457 ± 0.029
2.457TyrSer: 2.457 ± 1.89
1.843TyrThr: 1.843 ± 1.417
4.3TyrVal: 4.3 ± 3.307
0.0TyrTrp: 0.0 ± 0.0
1.229TyrTyr: 1.229 ± 0.015
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 2 proteins (1629 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski