Capybara microvirus Cap1_SP_64

Taxonomy: Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; unclassified Microviridae

Average proteome isoelectric point is 7.24

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 6 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4P8W7J2|A0A4P8W7J2_9VIRU Replication initiator protein OS=Capybara microvirus Cap1_SP_64 OX=2584787 PE=4 SV=1
MM1 pKa = 7.63AIEE4 pKa = 4.05NSFVYY9 pKa = 10.62SLTPVDD15 pKa = 3.31QTDD18 pKa = 3.56YY19 pKa = 11.43NKK21 pKa = 10.22FDD23 pKa = 3.8FGYY26 pKa = 10.87GKK28 pKa = 10.64YY29 pKa = 8.31FTAKK33 pKa = 9.58PGKK36 pKa = 9.68FYY38 pKa = 10.23PLHH41 pKa = 5.91WEE43 pKa = 4.22EE44 pKa = 4.88IEE46 pKa = 4.23PGANIHH52 pKa = 6.93SKK54 pKa = 9.13IQHH57 pKa = 6.04FARR60 pKa = 11.84TQPLVAPSMIDD71 pKa = 3.23MNIEE75 pKa = 3.98TFSFLVPFRR84 pKa = 11.84IIFDD88 pKa = 3.76GWQEE92 pKa = 4.11FISFGDD98 pKa = 3.56GKK100 pKa = 8.06TLKK103 pKa = 10.25NDD105 pKa = 3.74LGINSQIPYY114 pKa = 8.78ITTQQLLQYY123 pKa = 9.17FAHH126 pKa = 7.33DD127 pKa = 5.35LSCPWNLGFKK137 pKa = 10.01PDD139 pKa = 3.23NCNYY143 pKa = 9.49YY144 pKa = 8.69VTYY147 pKa = 10.47KK148 pKa = 10.77DD149 pKa = 5.65LYY151 pKa = 9.21QCCEE155 pKa = 4.04LLDD158 pKa = 3.92IPMSNLIDD166 pKa = 3.44IDD168 pKa = 3.93EE169 pKa = 4.55FQSYY173 pKa = 8.2DD174 pKa = 3.62TIKK177 pKa = 10.18TFILQTFTHH186 pKa = 7.05FSLTDD191 pKa = 3.13TGQKK195 pKa = 8.81FTIDD199 pKa = 3.35QLFTSQYY206 pKa = 9.64VQIFDD211 pKa = 4.72DD212 pKa = 4.57LNIHH216 pKa = 6.24TFPVNPQNFATLHH229 pKa = 5.86QITNSASTNLAFPKK243 pKa = 10.59YY244 pKa = 9.47SFSKK248 pKa = 10.54KK249 pKa = 10.09SIWYY253 pKa = 8.33NALNLYY259 pKa = 9.51HH260 pKa = 7.11DD261 pKa = 4.78KK262 pKa = 10.71EE263 pKa = 4.56YY264 pKa = 10.9EE265 pKa = 4.07SHH267 pKa = 7.14DD268 pKa = 3.48TQLYY272 pKa = 8.26YY273 pKa = 10.85DD274 pKa = 3.82NKK276 pKa = 8.6EE277 pKa = 4.34TYY279 pKa = 7.69DD280 pKa = 3.66TSSSSLWRR288 pKa = 11.84TRR290 pKa = 11.84LLNKK294 pKa = 10.45LEE296 pKa = 4.27TNNIRR301 pKa = 11.84SYY303 pKa = 10.18WLYY306 pKa = 11.17KK307 pKa = 10.77EE308 pKa = 5.64GDD310 pKa = 4.02TKK312 pKa = 11.01PSALWFATTPQIKK325 pKa = 8.37TLNNSFKK332 pKa = 10.59FAQSKK337 pKa = 10.69INLLPFFAKK346 pKa = 10.16QKK348 pKa = 10.63VYY350 pKa = 10.83EE351 pKa = 4.09DD352 pKa = 3.43WFRR355 pKa = 11.84CEE357 pKa = 3.97PFEE360 pKa = 4.43TEE362 pKa = 3.84YY363 pKa = 11.26SEE365 pKa = 4.01YY366 pKa = 10.5TIFSGKK372 pKa = 7.53VTEE375 pKa = 4.76LPTSEE380 pKa = 4.11FVKK383 pKa = 10.67VLHH386 pKa = 6.76LSPAHH391 pKa = 5.58YY392 pKa = 10.25KK393 pKa = 9.97RR394 pKa = 11.84DD395 pKa = 3.69YY396 pKa = 10.48FQAALPQPTALQQVFVPFSSPIDD419 pKa = 3.52LPGISNPFSDD429 pKa = 4.28NRR431 pKa = 11.84PVTLQMNSDD440 pKa = 3.15KK441 pKa = 11.13TLFAEE446 pKa = 4.55YY447 pKa = 10.23KK448 pKa = 9.7PDD450 pKa = 3.57PTRR453 pKa = 11.84STIAEE458 pKa = 3.96RR459 pKa = 11.84VEE461 pKa = 3.75NLGDD465 pKa = 5.09HH466 pKa = 6.67ILTYY470 pKa = 10.98DD471 pKa = 3.57NEE473 pKa = 4.95SNPSYY478 pKa = 10.13LTVNSIRR485 pKa = 11.84EE486 pKa = 4.13SFALQDD492 pKa = 3.68YY493 pKa = 11.14LEE495 pKa = 4.39TLNAVGNRR503 pKa = 11.84YY504 pKa = 9.51VEE506 pKa = 4.17MMYY509 pKa = 11.23SMYY512 pKa = 10.64GVQVPDD518 pKa = 3.58AVVKK522 pKa = 10.58RR523 pKa = 11.84PLYY526 pKa = 10.45LNHH529 pKa = 7.48DD530 pKa = 3.9SDD532 pKa = 3.88ILKK535 pKa = 10.5ISDD538 pKa = 3.76VEE540 pKa = 4.8SNSQTLLNNNEE551 pKa = 3.93INTPLGTLAGKK562 pKa = 10.31GIAYY566 pKa = 7.78STGSGYY572 pKa = 10.8NIQASEE578 pKa = 4.22FCILISFMRR587 pKa = 11.84ISPPSIYY594 pKa = 10.41FQGLPRR600 pKa = 11.84KK601 pKa = 9.32FMHH604 pKa = 7.02FDD606 pKa = 3.35PLDD609 pKa = 4.05FYY611 pKa = 11.01NHH613 pKa = 6.15KK614 pKa = 9.84FAHH617 pKa = 6.49LGEE620 pKa = 4.36QEE622 pKa = 4.26TFQGEE627 pKa = 4.31IYY629 pKa = 9.33FTGKK633 pKa = 10.02QDD635 pKa = 4.02DD636 pKa = 3.85DD637 pKa = 4.82SKK639 pKa = 11.71VFGYY643 pKa = 8.75MPRR646 pKa = 11.84FSEE649 pKa = 3.9YY650 pKa = 9.35RR651 pKa = 11.84GQVSRR656 pKa = 11.84SCGEE660 pKa = 4.06LNTNLHH666 pKa = 5.26YY667 pKa = 10.25WLPKK671 pKa = 10.0RR672 pKa = 11.84IFNGAPKK679 pKa = 10.22LGSNFSMQHH688 pKa = 5.83PNDD691 pKa = 4.45TIDD694 pKa = 4.92MFTNWDD700 pKa = 3.44QNYY703 pKa = 10.59DD704 pKa = 3.82SIIFQSYY711 pKa = 9.67IKK713 pKa = 9.49IDD715 pKa = 3.31KK716 pKa = 10.17SSRR719 pKa = 11.84IPVYY723 pKa = 9.67PIPSHH728 pKa = 6.34LCIYY732 pKa = 10.37NHH734 pKa = 6.86

Molecular weight: 85.22 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4V1FVM9|A0A4V1FVM9_9VIRU Uncharacterized protein OS=Capybara microvirus Cap1_SP_64 OX=2584787 PE=4 SV=1
MM1 pKa = 7.48KK2 pKa = 9.85CLHH5 pKa = 6.42PVGVYY10 pKa = 9.87INKK13 pKa = 9.79NYY15 pKa = 10.17KK16 pKa = 10.17DD17 pKa = 3.55LGFFQVPCGKK27 pKa = 10.4CYY29 pKa = 10.49NCKK32 pKa = 9.22QNKK35 pKa = 8.39AKK37 pKa = 10.5SVAFRR42 pKa = 11.84LEE44 pKa = 4.43LEE46 pKa = 4.23TQKK49 pKa = 11.23ASNSFFVTLTYY60 pKa = 10.02PDD62 pKa = 3.64HH63 pKa = 7.26SINKK67 pKa = 8.8INGVSCVDD75 pKa = 3.15NFITHH80 pKa = 7.56RR81 pKa = 11.84IFKK84 pKa = 10.24RR85 pKa = 11.84LRR87 pKa = 11.84SQVWNEE93 pKa = 3.67IKK95 pKa = 10.56KK96 pKa = 10.31SLHH99 pKa = 6.16KK100 pKa = 10.61LPCNRR105 pKa = 11.84FSPPSVKK112 pKa = 9.79QRR114 pKa = 11.84NRR116 pKa = 11.84QISALRR122 pKa = 11.84RR123 pKa = 11.84HH124 pKa = 6.5KK125 pKa = 11.0YY126 pKa = 10.22SLDD129 pKa = 3.92PIVRR133 pKa = 11.84SKK135 pKa = 11.4YY136 pKa = 10.58FLISEE141 pKa = 4.35YY142 pKa = 11.22GPLTSRR148 pKa = 11.84PHH150 pKa = 4.86YY151 pKa = 9.52HH152 pKa = 6.92FIWFFYY158 pKa = 10.71DD159 pKa = 3.15QVDD162 pKa = 3.63VMEE165 pKa = 4.52VEE167 pKa = 5.14KK168 pKa = 11.01KK169 pKa = 10.83LLDD172 pKa = 3.52LWDD175 pKa = 4.88GIITVDD181 pKa = 4.18LVNDD185 pKa = 3.24ARR187 pKa = 11.84INYY190 pKa = 7.88VSQYY194 pKa = 10.25CNKK197 pKa = 10.18DD198 pKa = 3.35CEE200 pKa = 4.38PQLFGQSKK208 pKa = 10.41NITRR212 pKa = 11.84CSINIGASLEE222 pKa = 3.92NSEE225 pKa = 4.28NYY227 pKa = 9.92NRR229 pKa = 11.84ILSQQCPRR237 pKa = 11.84VSWRR241 pKa = 11.84KK242 pKa = 10.03GSIKK246 pKa = 10.43LPSYY250 pKa = 9.75YY251 pKa = 9.45IRR253 pKa = 11.84RR254 pKa = 11.84AQKK257 pKa = 10.13HH258 pKa = 5.63GKK260 pKa = 8.8LQIKK264 pKa = 10.06DD265 pKa = 3.48SYY267 pKa = 11.29EE268 pKa = 4.13LYY270 pKa = 10.33TEE272 pKa = 4.38SKK274 pKa = 10.15KK275 pKa = 9.75QQQEE279 pKa = 3.36IDD281 pKa = 3.9HH282 pKa = 6.74KK283 pKa = 10.98IKK285 pKa = 10.08MYY287 pKa = 9.36CRR289 pKa = 11.84KK290 pKa = 10.11YY291 pKa = 10.64KK292 pKa = 10.28ILNKK296 pKa = 10.31HH297 pKa = 5.73EE298 pKa = 4.05FLKK301 pKa = 11.02FKK303 pKa = 10.44ISYY306 pKa = 9.86IYY308 pKa = 10.96ANEE311 pKa = 3.7KK312 pKa = 9.87NKK314 pKa = 10.31RR315 pKa = 11.84NKK317 pKa = 9.53RR318 pKa = 11.84ANII321 pKa = 3.63

Molecular weight: 38.17 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6

0

6

1645

79

734

274.2

31.85

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

3.83 ± 0.96

1.216 ± 0.556

5.775 ± 0.534

4.559 ± 0.341

6.444 ± 1.285

3.1 ± 0.705

2.553 ± 0.249

7.416 ± 0.432

7.599 ± 1.145

8.997 ± 0.776

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.337 ± 0.293

8.085 ± 0.908

4.316 ± 0.833

6.14 ± 1.189

3.587 ± 0.821

9.119 ± 0.696

5.775 ± 0.858

4.134 ± 0.608

0.851 ± 0.34

5.167 ± 0.948
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski