Amino acid dipepetide frequency for Fusarium poae virus 1-240374

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
4.488AlaAla: 4.488 ± 3.266
0.0AlaCys: 0.0 ± 0.0
2.992AlaAsp: 2.992 ± 0.099
2.992AlaGlu: 2.992 ± 1.138
1.496AlaPhe: 1.496 ± 0.989
5.236AlaGly: 5.236 ± 2.771
2.992AlaHis: 2.992 ± 0.939
2.992AlaIle: 2.992 ± 1.138
0.748AlaLys: 0.748 ± 0.544
1.496AlaLeu: 1.496 ± 0.989
0.748AlaMet: 0.748 ± 0.544
3.74AlaAsn: 3.74 ± 0.644
5.236AlaPro: 5.236 ± 1.732
2.244AlaGln: 2.244 ± 1.484
6.731AlaArg: 6.731 ± 1.782
5.236AlaSer: 5.236 ± 1.732
5.236AlaThr: 5.236 ± 0.693
2.244AlaVal: 2.244 ± 0.445
0.748AlaTrp: 0.748 ± 0.495
1.496AlaTyr: 1.496 ± 0.05
0.0AlaXaa: 0.0 ± 0.0
Cys
0.0CysAla: 0.0 ± 0.0
0.748CysCys: 0.748 ± 0.495
0.0CysAsp: 0.0 ± 0.0
0.0CysGlu: 0.0 ± 0.0
0.748CysPhe: 0.748 ± 0.495
0.748CysGly: 0.748 ± 0.495
0.0CysHis: 0.0 ± 0.0
0.748CysIle: 0.748 ± 0.495
0.748CysLys: 0.748 ± 0.544
0.748CysLeu: 0.748 ± 0.544
0.0CysMet: 0.0 ± 0.0
0.748CysAsn: 0.748 ± 0.495
0.748CysPro: 0.748 ± 0.495
0.0CysGln: 0.0 ± 0.0
0.748CysArg: 0.748 ± 0.495
0.0CysSer: 0.0 ± 0.0
0.0CysThr: 0.0 ± 0.0
0.0CysVal: 0.0 ± 0.0
0.0CysTrp: 0.0 ± 0.0
0.0CysTyr: 0.0 ± 0.0
0.0CysXaa: 0.0 ± 0.0
Asp
2.992AspAla: 2.992 ± 1.138
0.0AspCys: 0.0 ± 0.0
4.488AspAsp: 4.488 ± 1.928
2.992AspGlu: 2.992 ± 0.099
3.74AspPhe: 3.74 ± 1.434
2.992AspGly: 2.992 ± 0.939
1.496AspHis: 1.496 ± 0.05
2.992AspIle: 2.992 ± 0.099
2.992AspLys: 2.992 ± 1.978
7.479AspLeu: 7.479 ± 0.79
0.748AspMet: 0.748 ± 0.495
4.488AspAsn: 4.488 ± 2.227
2.992AspPro: 2.992 ± 1.138
0.748AspGln: 0.748 ± 0.495
2.992AspArg: 2.992 ± 0.939
5.984AspSer: 5.984 ± 2.276
2.244AspThr: 2.244 ± 0.594
4.488AspVal: 4.488 ± 1.188
0.748AspTrp: 0.748 ± 0.495
4.488AspTyr: 4.488 ± 0.149
0.0AspXaa: 0.0 ± 0.0
Glu
1.496GluAla: 1.496 ± 0.989
0.748GluCys: 0.748 ± 0.495
1.496GluAsp: 1.496 ± 0.05
0.0GluGlu: 0.0 ± 0.0
2.992GluPhe: 2.992 ± 0.939
0.748GluGly: 0.748 ± 0.544
1.496GluHis: 1.496 ± 0.05
1.496GluIle: 1.496 ± 0.05
2.992GluLys: 2.992 ± 1.138
3.74GluLeu: 3.74 ± 1.682
1.496GluMet: 1.496 ± 0.05
1.496GluAsn: 1.496 ± 1.089
2.244GluPro: 2.244 ± 0.594
0.748GluGln: 0.748 ± 0.495
2.992GluArg: 2.992 ± 0.939
5.984GluSer: 5.984 ± 2.917
2.244GluThr: 2.244 ± 1.484
1.496GluVal: 1.496 ± 0.989
0.0GluTrp: 0.0 ± 0.0
3.74GluTyr: 3.74 ± 2.473
0.0GluXaa: 0.0 ± 0.0
Phe
3.74PheAla: 3.74 ± 2.721
0.748PheCys: 0.748 ± 0.495
2.992PheAsp: 2.992 ± 1.138
1.496PheGlu: 1.496 ± 0.989
5.236PhePhe: 5.236 ± 1.384
3.74PheGly: 3.74 ± 0.395
1.496PheHis: 1.496 ± 0.989
3.74PheIle: 3.74 ± 1.682
2.992PheLys: 2.992 ± 0.099
5.984PheLeu: 5.984 ± 1.879
1.496PheMet: 1.496 ± 0.888
3.74PheAsn: 3.74 ± 0.395
4.488PhePro: 4.488 ± 0.89
2.992PheGln: 2.992 ± 0.099
1.496PheArg: 1.496 ± 0.05
2.992PheSer: 2.992 ± 0.099
4.488PheThr: 4.488 ± 1.928
5.236PheVal: 5.236 ± 0.345
0.0PheTrp: 0.0 ± 0.0
0.748PheTyr: 0.748 ± 0.544
0.0PheXaa: 0.0 ± 0.0
Gly
0.0GlyAla: 0.0 ± 0.0
0.0GlyCys: 0.0 ± 0.0
2.244GlyAsp: 2.244 ± 0.594
0.0GlyGlu: 0.0 ± 0.0
4.488GlyPhe: 4.488 ± 0.89
0.0GlyGly: 0.0 ± 0.0
2.244GlyHis: 2.244 ± 0.594
2.992GlyIle: 2.992 ± 0.099
2.244GlyLys: 2.244 ± 0.594
4.488GlyLeu: 4.488 ± 1.188
2.244GlyMet: 2.244 ± 1.484
2.992GlyAsn: 2.992 ± 0.099
1.496GlyPro: 1.496 ± 0.989
1.496GlyGln: 1.496 ± 0.05
1.496GlyArg: 1.496 ± 1.089
2.992GlySer: 2.992 ± 0.099
5.236GlyThr: 5.236 ± 1.732
0.748GlyVal: 0.748 ± 0.495
0.0GlyTrp: 0.0 ± 0.0
4.488GlyTyr: 4.488 ± 0.89
0.0GlyXaa: 0.0 ± 0.0
His
2.992HisAla: 2.992 ± 0.099
0.748HisCys: 0.748 ± 0.495
1.496HisAsp: 1.496 ± 0.05
3.74HisGlu: 3.74 ± 2.473
1.496HisPhe: 1.496 ± 0.989
1.496HisGly: 1.496 ± 0.05
2.244HisHis: 2.244 ± 0.594
2.244HisIle: 2.244 ± 1.484
1.496HisLys: 1.496 ± 0.989
2.992HisLeu: 2.992 ± 0.099
0.748HisMet: 0.748 ± 0.376
3.74HisAsn: 3.74 ± 0.644
4.488HisPro: 4.488 ± 0.149
0.0HisGln: 0.0 ± 0.0
0.0HisArg: 0.0 ± 0.0
1.496HisSer: 1.496 ± 0.05
1.496HisThr: 1.496 ± 0.05
2.992HisVal: 2.992 ± 0.939
0.748HisTrp: 0.748 ± 0.495
0.748HisTyr: 0.748 ± 0.495
0.0HisXaa: 0.0 ± 0.0
Ile
5.236IleAla: 5.236 ± 1.732
0.0IleCys: 0.0 ± 0.0
5.984IleAsp: 5.984 ± 0.199
6.731IleGlu: 6.731 ± 0.296
1.496IlePhe: 1.496 ± 0.05
1.496IleGly: 1.496 ± 0.05
4.488IleHis: 4.488 ± 0.89
1.496IleIle: 1.496 ± 0.05
2.244IleLys: 2.244 ± 1.484
5.984IleLeu: 5.984 ± 0.84
2.244IleMet: 2.244 ± 0.445
1.496IleAsn: 1.496 ± 0.05
2.992IlePro: 2.992 ± 0.939
0.748IleGln: 0.748 ± 0.495
2.244IleArg: 2.244 ± 0.445
3.74IleSer: 3.74 ± 1.682
4.488IleThr: 4.488 ± 0.149
1.496IleVal: 1.496 ± 0.989
0.0IleTrp: 0.0 ± 0.0
2.244IleTyr: 2.244 ± 0.594
0.0IleXaa: 0.0 ± 0.0
Lys
1.496LysAla: 1.496 ± 1.089
0.0LysCys: 0.0 ± 0.0
2.244LysAsp: 2.244 ± 0.594
0.748LysGlu: 0.748 ± 0.495
1.496LysPhe: 1.496 ± 1.089
2.992LysGly: 2.992 ± 0.099
1.496LysHis: 1.496 ± 0.05
4.488LysIle: 4.488 ± 1.928
2.992LysLys: 2.992 ± 1.138
3.74LysLeu: 3.74 ± 2.473
0.748LysMet: 0.748 ± 0.495
1.496LysAsn: 1.496 ± 1.089
1.496LysPro: 1.496 ± 0.989
1.496LysGln: 1.496 ± 0.989
2.244LysArg: 2.244 ± 0.445
5.984LysSer: 5.984 ± 0.199
2.244LysThr: 2.244 ± 0.445
0.0LysVal: 0.0 ± 0.0
0.748LysTrp: 0.748 ± 0.495
2.992LysTyr: 2.992 ± 0.939
0.0LysXaa: 0.0 ± 0.0
Leu
9.723LeuAla: 9.723 ± 1.881
0.748LeuCys: 0.748 ± 0.495
5.236LeuAsp: 5.236 ± 0.693
3.74LeuGlu: 3.74 ± 2.473
6.731LeuPhe: 6.731 ± 2.373
3.74LeuGly: 3.74 ± 1.682
3.74LeuHis: 3.74 ± 1.434
5.236LeuIle: 5.236 ± 0.693
2.244LeuLys: 2.244 ± 0.445
11.967LeuLeu: 11.967 ± 1.437
1.496LeuMet: 1.496 ± 1.089
2.244LeuAsn: 2.244 ± 0.445
5.236LeuPro: 5.236 ± 0.345
2.992LeuGln: 2.992 ± 0.099
2.992LeuArg: 2.992 ± 0.939
10.471LeuSer: 10.471 ± 3.464
8.227LeuThr: 8.227 ± 1.285
3.74LeuVal: 3.74 ± 0.644
0.748LeuTrp: 0.748 ± 0.544
6.731LeuTyr: 6.731 ± 1.782
0.0LeuXaa: 0.0 ± 0.0
Met
1.496MetAla: 1.496 ± 0.989
0.0MetCys: 0.0 ± 0.0
0.0MetAsp: 0.0 ± 0.0
0.0MetGlu: 0.0 ± 0.0
0.0MetPhe: 0.0 ± 0.0
1.496MetGly: 1.496 ± 0.05
0.0MetHis: 0.0 ± 0.0
0.0MetIle: 0.0 ± 0.0
0.748MetLys: 0.748 ± 0.495
3.74MetLeu: 3.74 ± 1.434
0.0MetMet: 0.0 ± 0.0
3.74MetAsn: 3.74 ± 0.644
0.748MetPro: 0.748 ± 0.544
0.0MetGln: 0.0 ± 0.0
0.0MetArg: 0.0 ± 0.0
4.488MetSer: 4.488 ± 1.188
0.0MetThr: 0.0 ± 0.0
2.992MetVal: 2.992 ± 0.939
0.0MetTrp: 0.0 ± 0.0
0.748MetTyr: 0.748 ± 0.495
0.0MetXaa: 0.0 ± 0.0
Asn
4.488AsnAla: 4.488 ± 1.188
0.0AsnCys: 0.0 ± 0.0
3.74AsnAsp: 3.74 ± 0.644
0.748AsnGlu: 0.748 ± 0.544
2.992AsnPhe: 2.992 ± 0.099
2.244AsnGly: 2.244 ± 0.594
2.992AsnHis: 2.992 ± 0.939
5.236AsnIle: 5.236 ± 1.732
0.0AsnLys: 0.0 ± 0.0
6.731AsnLeu: 6.731 ± 1.782
1.496AsnMet: 1.496 ± 0.05
2.992AsnAsn: 2.992 ± 2.177
3.74AsnPro: 3.74 ± 1.682
2.244AsnGln: 2.244 ± 0.445
2.244AsnArg: 2.244 ± 0.445
2.992AsnSer: 2.992 ± 0.099
1.496AsnThr: 1.496 ± 0.05
2.992AsnVal: 2.992 ± 1.138
0.0AsnTrp: 0.0 ± 0.0
1.496AsnTyr: 1.496 ± 1.089
0.0AsnXaa: 0.0 ± 0.0
Pro
2.992ProAla: 2.992 ± 0.099
0.0ProCys: 0.0 ± 0.0
4.488ProAsp: 4.488 ± 1.928
6.731ProGlu: 6.731 ± 0.743
3.74ProPhe: 3.74 ± 0.644
0.748ProGly: 0.748 ± 0.495
1.496ProHis: 1.496 ± 0.05
3.74ProIle: 3.74 ± 0.395
2.992ProLys: 2.992 ± 0.939
5.236ProLeu: 5.236 ± 0.345
0.0ProMet: 0.0 ± 0.0
2.244ProAsn: 2.244 ± 1.633
3.74ProPro: 3.74 ± 0.395
2.244ProGln: 2.244 ± 0.445
3.74ProArg: 3.74 ± 1.434
8.975ProSer: 8.975 ± 0.298
6.731ProThr: 6.731 ± 0.743
5.236ProVal: 5.236 ± 1.732
0.748ProTrp: 0.748 ± 0.495
2.992ProTyr: 2.992 ± 1.138
0.0ProXaa: 0.0 ± 0.0
Gln
0.0GlnAla: 0.0 ± 0.0
0.748GlnCys: 0.748 ± 0.495
1.496GlnAsp: 1.496 ± 0.05
0.0GlnGlu: 0.0 ± 0.0
2.244GlnPhe: 2.244 ± 0.445
1.496GlnGly: 1.496 ± 0.05
0.0GlnHis: 0.0 ± 0.0
1.496GlnIle: 1.496 ± 0.989
0.0GlnLys: 0.0 ± 0.0
2.244GlnLeu: 2.244 ± 0.594
0.0GlnMet: 0.0 ± 0.0
0.748GlnAsn: 0.748 ± 0.544
2.992GlnPro: 2.992 ± 0.939
2.244GlnGln: 2.244 ± 0.445
2.992GlnArg: 2.992 ± 0.939
4.488GlnSer: 4.488 ± 1.928
2.244GlnThr: 2.244 ± 0.445
0.748GlnVal: 0.748 ± 0.495
0.0GlnTrp: 0.0 ± 0.0
3.74GlnTyr: 3.74 ± 1.434
0.0GlnXaa: 0.0 ± 0.0
Arg
2.992ArgAla: 2.992 ± 0.099
0.0ArgCys: 0.0 ± 0.0
2.992ArgAsp: 2.992 ± 0.939
1.496ArgGlu: 1.496 ± 0.989
2.992ArgPhe: 2.992 ± 2.177
1.496ArgGly: 1.496 ± 0.989
1.496ArgHis: 1.496 ± 0.989
2.992ArgIle: 2.992 ± 1.978
2.244ArgLys: 2.244 ± 0.445
5.236ArgLeu: 5.236 ± 2.423
0.748ArgMet: 0.748 ± 0.544
1.496ArgAsn: 1.496 ± 0.05
6.731ArgPro: 6.731 ± 1.334
0.748ArgGln: 0.748 ± 0.495
2.244ArgArg: 2.244 ± 0.445
5.236ArgSer: 5.236 ± 0.345
4.488ArgThr: 4.488 ± 2.227
2.244ArgVal: 2.244 ± 1.633
0.748ArgTrp: 0.748 ± 0.495
0.748ArgTyr: 0.748 ± 0.495
0.0ArgXaa: 0.0 ± 0.0
Ser
4.488SerAla: 4.488 ± 0.89
0.748SerCys: 0.748 ± 0.495
8.227SerAsp: 8.227 ± 0.793
0.748SerGlu: 0.748 ± 0.495
5.984SerPhe: 5.984 ± 1.238
5.984SerGly: 5.984 ± 0.199
4.488SerHis: 4.488 ± 0.89
5.236SerIle: 5.236 ± 0.345
5.984SerLys: 5.984 ± 0.84
8.975SerLeu: 8.975 ± 4.453
1.496SerMet: 1.496 ± 0.989
3.74SerAsn: 3.74 ± 0.644
3.74SerPro: 3.74 ± 0.644
3.74SerGln: 3.74 ± 0.395
5.236SerArg: 5.236 ± 0.693
5.984SerSer: 5.984 ± 3.315
7.479SerThr: 7.479 ± 4.404
4.488SerVal: 4.488 ± 1.188
0.748SerTrp: 0.748 ± 0.544
4.488SerTyr: 4.488 ± 0.89
0.0SerXaa: 0.0 ± 0.0
Thr
4.488ThrAla: 4.488 ± 1.188
0.748ThrCys: 0.748 ± 0.544
2.992ThrAsp: 2.992 ± 0.099
1.496ThrGlu: 1.496 ± 0.05
5.984ThrPhe: 5.984 ± 1.238
0.748ThrGly: 0.748 ± 0.495
0.748ThrHis: 0.748 ± 0.495
4.488ThrIle: 4.488 ± 0.149
2.992ThrLys: 2.992 ± 1.138
8.227ThrLeu: 8.227 ± 1.832
0.748ThrMet: 0.748 ± 0.495
5.984ThrAsn: 5.984 ± 1.238
8.227ThrPro: 8.227 ± 1.832
2.244ThrGln: 2.244 ± 0.445
5.236ThrArg: 5.236 ± 0.345
2.992ThrSer: 2.992 ± 1.138
4.488ThrThr: 4.488 ± 0.89
3.74ThrVal: 3.74 ± 0.395
3.74ThrTrp: 3.74 ± 0.644
2.244ThrTyr: 2.244 ± 0.445
0.0ThrXaa: 0.0 ± 0.0
Val
0.748ValAla: 0.748 ± 0.495
0.0ValCys: 0.0 ± 0.0
3.74ValAsp: 3.74 ± 0.395
2.244ValGlu: 2.244 ± 0.594
2.992ValPhe: 2.992 ± 0.099
1.496ValGly: 1.496 ± 0.05
0.748ValHis: 0.748 ± 0.544
2.244ValIle: 2.244 ± 0.445
1.496ValLys: 1.496 ± 0.05
3.74ValLeu: 3.74 ± 1.682
1.496ValMet: 1.496 ± 0.989
3.74ValAsn: 3.74 ± 0.395
5.236ValPro: 5.236 ± 0.693
0.748ValGln: 0.748 ± 0.544
2.244ValArg: 2.244 ± 1.484
8.227ValSer: 8.227 ± 1.832
5.236ValThr: 5.236 ± 0.693
3.74ValVal: 3.74 ± 0.395
0.748ValTrp: 0.748 ± 0.495
2.244ValTyr: 2.244 ± 1.484
0.0ValXaa: 0.0 ± 0.0
Trp
0.748TrpAla: 0.748 ± 0.495
0.0TrpCys: 0.0 ± 0.0
0.748TrpAsp: 0.748 ± 0.495
0.0TrpGlu: 0.0 ± 0.0
0.748TrpPhe: 0.748 ± 0.544
0.0TrpGly: 0.0 ± 0.0
0.748TrpHis: 0.748 ± 0.544
0.748TrpIle: 0.748 ± 0.495
0.748TrpLys: 0.748 ± 0.495
0.0TrpLeu: 0.0 ± 0.0
0.0TrpMet: 0.0 ± 0.0
0.0TrpAsn: 0.0 ± 0.0
0.0TrpPro: 0.0 ± 0.0
0.0TrpGln: 0.0 ± 0.0
0.0TrpArg: 0.0 ± 0.0
2.992TrpSer: 2.992 ± 0.939
0.748TrpThr: 0.748 ± 0.544
0.748TrpVal: 0.748 ± 0.495
0.0TrpTrp: 0.0 ± 0.0
1.496TrpTyr: 1.496 ± 0.05
0.0TrpXaa: 0.0 ± 0.0
Tyr
4.488TyrAla: 4.488 ± 0.149
0.748TyrCys: 0.748 ± 0.544
4.488TyrAsp: 4.488 ± 0.149
3.74TyrGlu: 3.74 ± 1.434
2.992TyrPhe: 2.992 ± 0.099
2.992TyrGly: 2.992 ± 0.939
2.992TyrHis: 2.992 ± 0.939
2.244TyrIle: 2.244 ± 0.594
2.244TyrLys: 2.244 ± 1.484
5.236TyrLeu: 5.236 ± 0.345
1.496TyrMet: 1.496 ± 0.05
0.0TyrAsn: 0.0 ± 0.0
2.244TyrPro: 2.244 ± 1.484
2.244TyrGln: 2.244 ± 1.484
1.496TyrArg: 1.496 ± 0.05
0.748TyrSer: 0.748 ± 0.544
3.74TyrThr: 3.74 ± 1.682
3.74TyrVal: 3.74 ± 0.395
0.0TyrTrp: 0.0 ± 0.0
2.244TyrTyr: 2.244 ± 0.445
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 2 proteins (1338 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski