Arcticibacterium luteifluviistationis

Taxonomy: cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Arcticibacterium

Average proteome isoelectric point is 6.26

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4329 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2Z4GB05|A0A2Z4GB05_9BACT Dehydrogenase OS=Arcticibacterium luteifluviistationis OX=1784714 GN=DJ013_09470 PE=4 SV=1
MM1 pKa = 7.12STLKK5 pKa = 10.19EE6 pKa = 4.1KK7 pKa = 11.06NMSNTLNKK15 pKa = 10.29LLLLAFTLFAFIHH28 pKa = 6.12EE29 pKa = 5.3GYY31 pKa = 9.25SQNNADD37 pKa = 4.12PGIGILMSPSIVIQGSTGILSATVGNYY64 pKa = 9.93GNEE67 pKa = 4.21TIVEE71 pKa = 3.92NSLRR75 pKa = 11.84VTITVGSNAEE85 pKa = 4.23IIGIAPGSDD94 pKa = 3.51SRR96 pKa = 11.84WSQLSLTTGSANSIKK111 pKa = 9.91LTNTVGGFNSFDD123 pKa = 3.37VGDD126 pKa = 3.6ILLTVRR132 pKa = 11.84GNLVSAPEE140 pKa = 4.73LILGNIVYY148 pKa = 8.49ITAEE152 pKa = 4.15NPLLCDD158 pKa = 4.19GCPSPPYY165 pKa = 10.26NVSQGNASSLNDD177 pKa = 3.37NSQTSLATSAPVIDD191 pKa = 4.29AVVDD195 pKa = 3.65ATAAVSGLTGGITSALTSNDD215 pKa = 3.39SLNGIVVVIGIDD227 pKa = 3.42SGNVTLTGLNVPAGLTLNADD247 pKa = 3.5GTVTVDD253 pKa = 3.18SNTPAGNYY261 pKa = 7.98NVEE264 pKa = 4.13YY265 pKa = 10.38KK266 pKa = 10.11ICEE269 pKa = 4.15VNNPTNCDD277 pKa = 3.32SVISMIVVSAPIIAAVVDD295 pKa = 3.84TTAAVSGLTGGITSALTSNDD315 pKa = 3.39SLNGIVVVIGIDD327 pKa = 3.24SGNVMLTGLTVPAGLTLNADD347 pKa = 3.5GTVTVDD353 pKa = 3.18SNTPAGNYY361 pKa = 7.98NVEE364 pKa = 4.13YY365 pKa = 10.38KK366 pKa = 10.11ICEE369 pKa = 4.15VNNPTNCDD377 pKa = 3.32SVISMIVVSAPIIAAVVDD395 pKa = 3.84TTAAVSGLTGGITSALTSNDD415 pKa = 3.39SLNGIVVVIGIDD427 pKa = 3.42SGNVTLTGLNVPAGLTLNADD447 pKa = 3.5GTVTVDD453 pKa = 3.18SNTPAGNYY461 pKa = 7.98NVEE464 pKa = 4.13YY465 pKa = 10.38KK466 pKa = 10.11ICEE469 pKa = 4.15VNNPTNCDD477 pKa = 3.32SVISMIVVSAPIIAAVVDD495 pKa = 3.84TTAAVSGLTGGITSALTSNDD515 pKa = 3.39SLNGIVVVIGIDD527 pKa = 3.24SGNVMLTGLTVPAGLTLNADD547 pKa = 3.5GTVTVDD553 pKa = 3.18SNTPAGNYY561 pKa = 7.98NVEE564 pKa = 4.13YY565 pKa = 10.38KK566 pKa = 10.11ICEE569 pKa = 4.15VNNPTNCDD577 pKa = 3.32SVISMIVVSAPIIAAVVDD595 pKa = 3.84TTAAVSGLTGGITSALTSNDD615 pKa = 3.39SLNGIVVVIGIDD627 pKa = 3.42SGNVTLTGLNVPAGLTLNADD647 pKa = 3.5GTVTVDD653 pKa = 3.18SNTPAGNYY661 pKa = 7.98NVEE664 pKa = 4.13YY665 pKa = 10.38KK666 pKa = 10.11ICEE669 pKa = 4.15VNNPTNCDD677 pKa = 3.3SVISMIEE684 pKa = 4.01VYY686 pKa = 10.36RR687 pKa = 11.84EE688 pKa = 4.03LPDD691 pKa = 3.88LSPTIDD697 pKa = 2.97IDD699 pKa = 4.03ALVFPIAGSAKK710 pKa = 10.29DD711 pKa = 3.52FVVNIGDD718 pKa = 3.8VKK720 pKa = 10.9GVEE723 pKa = 4.04SDD725 pKa = 3.52GQVVVKK731 pKa = 10.09VSKK734 pKa = 10.98GNAFFISYY742 pKa = 10.84ADD744 pKa = 3.45STSNSNANGGSVPVNNSAWIITEE767 pKa = 3.72NASFITITLKK777 pKa = 10.79PGVQISANTFSAIGFTITRR796 pKa = 11.84KK797 pKa = 10.31AGVPTQTSQPITVTIVNGTGLDD819 pKa = 3.75SQNSNNAYY827 pKa = 8.58STIVTAQQ834 pKa = 2.84

Molecular weight: 84.3 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2Z4GBV0|A0A2Z4GBV0_9BACT Glycosyltransferase family 2 protein OS=Arcticibacterium luteifluviistationis OX=1784714 GN=DJ013_10660 PE=4 SV=1
MM1 pKa = 7.47AVKK4 pKa = 10.11KK5 pKa = 10.09LKK7 pKa = 9.13PTTPGQRR14 pKa = 11.84QRR16 pKa = 11.84VAPDD20 pKa = 3.76FSDD23 pKa = 2.84ITTNKK28 pKa = 9.57PEE30 pKa = 3.92RR31 pKa = 11.84SLIGVVKK38 pKa = 9.62KK39 pKa = 9.32TGGRR43 pKa = 11.84NNEE46 pKa = 3.75GHH48 pKa = 5.56RR49 pKa = 11.84TSRR52 pKa = 11.84YY53 pKa = 8.83IGGGHH58 pKa = 5.9KK59 pKa = 9.68RR60 pKa = 11.84RR61 pKa = 11.84YY62 pKa = 9.75RR63 pKa = 11.84IIDD66 pKa = 3.74FKK68 pKa = 10.85RR69 pKa = 11.84DD70 pKa = 3.24KK71 pKa = 10.69RR72 pKa = 11.84DD73 pKa = 3.21MVAEE77 pKa = 4.23VATIEE82 pKa = 3.99YY83 pKa = 10.37DD84 pKa = 3.44PNRR87 pKa = 11.84SARR90 pKa = 11.84IALVKK95 pKa = 11.01YY96 pKa = 9.7EE97 pKa = 4.73DD98 pKa = 3.68GEE100 pKa = 4.03KK101 pKa = 10.23RR102 pKa = 11.84YY103 pKa = 10.2IIAPQGLQVGQKK115 pKa = 9.38IEE117 pKa = 4.6AGDD120 pKa = 3.89SVAPEE125 pKa = 3.88VGNCLRR131 pKa = 11.84VGNMPLGTIIHH142 pKa = 6.6NIEE145 pKa = 3.96LTPGKK150 pKa = 10.16GGQLSRR156 pKa = 11.84SAGTYY161 pKa = 9.86AQLLAKK167 pKa = 10.1DD168 pKa = 3.99GKK170 pKa = 10.57YY171 pKa = 8.43VTLKK175 pKa = 9.96MPSGEE180 pKa = 3.99MRR182 pKa = 11.84LVLSTCVATVGSVSNPDD199 pKa = 3.27HH200 pKa = 6.53MNVNLGKK207 pKa = 10.39AGRR210 pKa = 11.84NRR212 pKa = 11.84WLGRR216 pKa = 11.84RR217 pKa = 11.84PRR219 pKa = 11.84VRR221 pKa = 11.84GVAMNPVDD229 pKa = 3.68HH230 pKa = 7.13PMGGGEE236 pKa = 3.89GRR238 pKa = 11.84ASGGHH243 pKa = 5.11PRR245 pKa = 11.84SRR247 pKa = 11.84NGVMAKK253 pKa = 10.11GKK255 pKa = 8.35KK256 pKa = 7.69TRR258 pKa = 11.84SKK260 pKa = 10.76NKK262 pKa = 9.01YY263 pKa = 7.5SNRR266 pKa = 11.84LIISKK271 pKa = 10.21RR272 pKa = 11.84SKK274 pKa = 10.67

Molecular weight: 30.0 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4329

0

4329

1600995

38

7596

369.8

41.38

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.742 ± 0.04

0.808 ± 0.018

5.545 ± 0.031

6.59 ± 0.043

5.146 ± 0.039

7.099 ± 0.041

1.651 ± 0.017

7.31 ± 0.035

7.227 ± 0.055

9.372 ± 0.049

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.218 ± 0.021

5.934 ± 0.047

3.594 ± 0.022

3.15 ± 0.023

3.391 ± 0.03

7.193 ± 0.056

5.756 ± 0.082

6.188 ± 0.029

1.178 ± 0.015

3.909 ± 0.024
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski