Beihai partiti-like virus 2

Taxonomy: Viruses; Riboviria; unclassified Riboviria; unclassified RNA viruses ShiM-2016

Average proteome isoelectric point is 7.41

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1L3KLI2|A0A1L3KLI2_9VIRU RdRp OS=Beihai partiti-like virus 2 OX=1922504 PE=4 SV=1
MM1 pKa = 7.25SLKK4 pKa = 10.3RR5 pKa = 11.84LPPSSSFPVDD15 pKa = 3.33TRR17 pKa = 11.84PPPVDD22 pKa = 3.74QIALKK27 pKa = 10.08YY28 pKa = 8.33ARR30 pKa = 11.84KK31 pKa = 8.89WFGDD35 pKa = 3.79GPVDD39 pKa = 3.46KK40 pKa = 11.07AIGSKK45 pKa = 10.01HH46 pKa = 5.81RR47 pKa = 11.84AVASNEE53 pKa = 3.92AIMDD57 pKa = 4.64NIRR60 pKa = 11.84GFDD63 pKa = 3.02RR64 pKa = 11.84RR65 pKa = 11.84YY66 pKa = 10.31APRR69 pKa = 11.84ITDD72 pKa = 3.92PVWEE76 pKa = 4.95SILQRR81 pKa = 11.84VYY83 pKa = 11.38EE84 pKa = 4.22EE85 pKa = 4.09IKK87 pKa = 10.48PNEE90 pKa = 4.27LIIPYY95 pKa = 7.06TTGGALKK102 pKa = 10.87DD103 pKa = 3.65PDD105 pKa = 4.16FPMKK109 pKa = 10.36KK110 pKa = 10.08SPGLPWKK117 pKa = 10.83LEE119 pKa = 4.22GYY121 pKa = 7.14GTKK124 pKa = 10.55GDD126 pKa = 3.4VCAIPEE132 pKa = 4.58NINKK136 pKa = 9.46IKK138 pKa = 10.34EE139 pKa = 3.77PWYY142 pKa = 9.52KK143 pKa = 10.33VGRR146 pKa = 11.84GYY148 pKa = 8.46HH149 pKa = 5.65TSMPDD154 pKa = 2.88CMVYY158 pKa = 10.23YY159 pKa = 10.41RR160 pKa = 11.84SHH162 pKa = 6.98ICDD165 pKa = 3.24TEE167 pKa = 4.12EE168 pKa = 3.76NKK170 pKa = 9.61IRR172 pKa = 11.84AVWGYY177 pKa = 8.22PLEE180 pKa = 4.44VFTEE184 pKa = 4.46EE185 pKa = 4.26ARR187 pKa = 11.84FVYY190 pKa = 10.07PFLQHH195 pKa = 7.1LKK197 pKa = 7.55TTPEE201 pKa = 4.82DD202 pKa = 3.59YY203 pKa = 10.72PIAYY207 pKa = 8.8GLEE210 pKa = 4.19MINGGMAYY218 pKa = 10.24LEE220 pKa = 4.62EE221 pKa = 4.65AWQQTRR227 pKa = 11.84AKK229 pKa = 9.46FAIMLDD235 pKa = 3.19WSSFDD240 pKa = 3.51QSIPPWLIRR249 pKa = 11.84DD250 pKa = 3.58AFSILEE256 pKa = 3.96RR257 pKa = 11.84CFDD260 pKa = 4.16FSHH263 pKa = 6.59VLASDD268 pKa = 3.79GKK270 pKa = 10.06IFPVDD275 pKa = 3.11PDD277 pKa = 3.2KK278 pKa = 10.83THH280 pKa = 6.81RR281 pKa = 11.84RR282 pKa = 11.84WKK284 pKa = 10.38RR285 pKa = 11.84LISYY289 pKa = 8.04FINTPFRR296 pKa = 11.84MPTGEE301 pKa = 4.47RR302 pKa = 11.84FLKK305 pKa = 10.83SGGVPSGSGFTNLIDD320 pKa = 4.24SIVNILVVRR329 pKa = 11.84YY330 pKa = 8.17ITYY333 pKa = 10.43HH334 pKa = 5.96NLGEE338 pKa = 4.56LPLHH342 pKa = 7.05DD343 pKa = 4.66MALGDD348 pKa = 4.33DD349 pKa = 3.9SVVYY353 pKa = 10.17TNGHH357 pKa = 6.39PSLEE361 pKa = 4.19RR362 pKa = 11.84MSEE365 pKa = 4.11LAQEE369 pKa = 4.27WFGMTINMRR378 pKa = 11.84KK379 pKa = 9.87SYY381 pKa = 7.92VTRR384 pKa = 11.84CARR387 pKa = 11.84NIQFLGYY394 pKa = 8.45YY395 pKa = 9.37NEE397 pKa = 4.21YY398 pKa = 10.78GMPFRR403 pKa = 11.84DD404 pKa = 3.78VQFLIASWIFPEE416 pKa = 5.33RR417 pKa = 11.84FQTPDD422 pKa = 3.21PAFTAIRR429 pKa = 11.84GLGQLWSTMNSTAAVFWHH447 pKa = 6.05YY448 pKa = 10.88AVSDD452 pKa = 4.18IISDD456 pKa = 3.98YY457 pKa = 10.97NLPSNWIEE465 pKa = 4.72DD466 pKa = 3.46IRR468 pKa = 11.84EE469 pKa = 4.03KK470 pKa = 10.94YY471 pKa = 10.25PNVLKK476 pKa = 10.55FLSLYY481 pKa = 10.64GITKK485 pKa = 10.13ISLPEE490 pKa = 3.94IDD492 pKa = 4.13ARR494 pKa = 11.84ASVFEE499 pKa = 3.93VTPRR503 pKa = 11.84IKK505 pKa = 10.35PLRR508 pKa = 11.84YY509 pKa = 8.9PKK511 pKa = 10.44RR512 pKa = 11.84RR513 pKa = 11.84DD514 pKa = 2.97LDD516 pKa = 3.25IRR518 pKa = 11.84SCYY521 pKa = 9.18QRR523 pKa = 11.84GRR525 pKa = 11.84DD526 pKa = 3.74VVPLRR531 pKa = 11.84DD532 pKa = 3.28

Molecular weight: 61.51 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1L3KLI2|A0A1L3KLI2_9VIRU RdRp OS=Beihai partiti-like virus 2 OX=1922504 PE=4 SV=1
MM1 pKa = 7.57EE2 pKa = 6.22SIPEE6 pKa = 4.09NSNPAAPEE14 pKa = 4.14VPASAPRR21 pKa = 11.84GGGYY25 pKa = 9.74RR26 pKa = 11.84GRR28 pKa = 11.84GRR30 pKa = 11.84SGPRR34 pKa = 11.84GRR36 pKa = 11.84RR37 pKa = 11.84GRR39 pKa = 11.84GGGGRR44 pKa = 11.84GGQKK48 pKa = 9.79PQTPPPPPAPAGGDD62 pKa = 3.31PFAPRR67 pKa = 11.84GKK69 pKa = 9.94GGNPAIPKK77 pKa = 9.57DD78 pKa = 3.9DD79 pKa = 4.33PAADD83 pKa = 3.7SAIMIDD89 pKa = 4.38GIAGFVEE96 pKa = 4.31KK97 pKa = 10.08TKK99 pKa = 11.05NQLFQLDD106 pKa = 4.15LSQYY110 pKa = 7.81ITLVTEE116 pKa = 4.23SYY118 pKa = 10.37IAQTTCDD125 pKa = 3.11RR126 pKa = 11.84GLAKK130 pKa = 10.18FVSASAYY137 pKa = 8.71QYY139 pKa = 11.83YY140 pKa = 8.77MVILLWRR147 pKa = 11.84RR148 pKa = 11.84LFQLTSARR156 pKa = 11.84RR157 pKa = 11.84GDD159 pKa = 3.49SCFDD163 pKa = 3.48EE164 pKa = 5.24LSRR167 pKa = 11.84ALPHH171 pKa = 6.2SLPVPKK177 pKa = 10.06DD178 pKa = 2.96IKK180 pKa = 10.67IYY182 pKa = 10.66LDD184 pKa = 3.29SLGNIKK190 pKa = 10.61DD191 pKa = 3.82GEE193 pKa = 4.35GQDD196 pKa = 3.22WVFDD200 pKa = 5.07FIADD204 pKa = 4.32FSDD207 pKa = 3.19TKK209 pKa = 11.2VFGISGSYY217 pKa = 10.68GKK219 pKa = 10.26ISTEE223 pKa = 3.21NHH225 pKa = 5.15LQYY228 pKa = 10.2EE229 pKa = 4.56TVPCPVIPLLTMRR242 pKa = 11.84ADD244 pKa = 3.27ILRR247 pKa = 11.84TKK249 pKa = 10.58FAGTRR254 pKa = 11.84SWSLPTALTPADD266 pKa = 4.12VEE268 pKa = 4.45DD269 pKa = 4.59TSPGLPTLDD278 pKa = 3.32LLGYY282 pKa = 10.13QKK284 pKa = 11.22AKK286 pKa = 10.91NLTDD290 pKa = 3.36DD291 pKa = 3.88QYY293 pKa = 12.19NVLIGNGVDD302 pKa = 3.43VSGPAEE308 pKa = 4.47DD309 pKa = 3.38EE310 pKa = 4.49TFFNARR316 pKa = 11.84MVANVPVIQSLMGFLVGQFEE336 pKa = 4.66STKK339 pKa = 10.56CPMEE343 pKa = 5.55RR344 pKa = 11.84YY345 pKa = 7.72DD346 pKa = 3.46TTAITGSLAQVPFTVRR362 pKa = 11.84SSFSFSPNEE371 pKa = 4.17RR372 pKa = 11.84ISQKK376 pKa = 10.84VGITQTYY383 pKa = 7.93RR384 pKa = 11.84QSPPYY389 pKa = 8.86VACASMMFRR398 pKa = 11.84FRR400 pKa = 11.84IMRR403 pKa = 11.84AKK405 pKa = 10.45KK406 pKa = 10.38SGIQTDD412 pKa = 4.64GFCYY416 pKa = 9.9PWWNDD421 pKa = 3.0TKK423 pKa = 10.59KK424 pKa = 10.75KK425 pKa = 10.81YY426 pKa = 10.06IIPPEE431 pKa = 4.4WIANANDD438 pKa = 3.47IFNKK442 pKa = 8.54PEE444 pKa = 3.44KK445 pKa = 10.04WNISDD450 pKa = 4.2FTAGTADD457 pKa = 3.64GQALLSDD464 pKa = 4.78LARR467 pKa = 11.84KK468 pKa = 7.03TKK470 pKa = 10.21KK471 pKa = 10.05KK472 pKa = 10.59QEE474 pKa = 3.91

Molecular weight: 51.97 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

1006

474

532

503.0

56.74

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.66 ± 0.9

1.193 ± 0.048

6.461 ± 0.052

4.672 ± 0.58

4.97 ± 0.078

7.455 ± 1.072

1.193 ± 0.511

6.859 ± 0.631

5.368 ± 0.218

7.058 ± 0.203

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.485 ± 0.249

3.579 ± 0.005

8.052 ± 0.117

3.28 ± 0.762

6.66 ± 0.499

6.958 ± 0.282

5.567 ± 0.645

5.07 ± 0.284

2.087 ± 0.405

4.374 ± 0.662
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski