Batrachochytrium salamandrivorans

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Fungi incertae sedis; Chytridiomycota; Chytridiomycota incertae sedis; Chytridiomycetes; Rhizophydiales; Rhizophydiales incertae sedis; Batrachochytrium

Average proteome isoelectric point is 6.57

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 11933 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1S8VZV9|A0A1S8VZV9_9FUNG Uncharacterized protein OS=Batrachochytrium salamandrivorans OX=1357716 GN=BSLG_02834 PE=4 SV=1
MM1 pKa = 7.67EE2 pKa = 5.37GLDD5 pKa = 5.31RR6 pKa = 11.84PDD8 pKa = 4.33LLDD11 pKa = 3.44GRR13 pKa = 11.84TDD15 pKa = 3.0IGSTEE20 pKa = 4.15GEE22 pKa = 4.35DD23 pKa = 4.21DD24 pKa = 3.67VSADD28 pKa = 3.87SEE30 pKa = 4.4LADD33 pKa = 3.78TLAQIAAIDD42 pKa = 3.88EE43 pKa = 4.42LLAVASSAQSSDD55 pKa = 2.76LTYY58 pKa = 10.72PPTEE62 pKa = 4.1PTSNTITDD70 pKa = 3.86DD71 pKa = 3.62PAGISGLEE79 pKa = 3.84EE80 pKa = 4.81LIVARR85 pKa = 11.84NQLVEE90 pKa = 4.17LADD93 pKa = 4.01LQRR96 pKa = 11.84LLLSSAEE103 pKa = 4.25SVDD106 pKa = 3.73TSSTAAQHH114 pKa = 5.16VQSDD118 pKa = 4.33VAHH121 pKa = 6.79PSCSIDD127 pKa = 3.07IGEE130 pKa = 4.76SSTDD134 pKa = 3.22NNTDD138 pKa = 3.09NNADD142 pKa = 3.41NNTYY146 pKa = 11.06NNTYY150 pKa = 10.56NNTYY154 pKa = 10.46NNTVYY159 pKa = 10.66PSRR162 pKa = 11.84PTFAVGGLCCVVFSMSSSQQSFHH185 pKa = 7.17LLATITSLDD194 pKa = 3.55QPTNAQRR201 pKa = 11.84EE202 pKa = 4.17SDD204 pKa = 4.0ANLGSDD210 pKa = 4.85DD211 pKa = 4.08SDD213 pKa = 3.43IYY215 pKa = 9.93ATVMLLTPMTLEE227 pKa = 4.12TRR229 pKa = 11.84PCLDD233 pKa = 2.84IATCSRR239 pKa = 11.84EE240 pKa = 4.2CGRR243 pKa = 11.84SS244 pKa = 3.16

Molecular weight: 25.94 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1S8VUI4|A0A1S8VUI4_9FUNG Uncharacterized protein OS=Batrachochytrium salamandrivorans OX=1357716 GN=BSLG_04310 PE=4 SV=1
RR1 pKa = 7.9LQIPRR6 pKa = 11.84MLHH9 pKa = 5.53QRR11 pKa = 11.84LHH13 pKa = 5.79DD14 pKa = 3.32QYY16 pKa = 10.81MLHH19 pKa = 6.42QRR21 pKa = 11.84LQIPRR26 pKa = 11.84MLNQHH31 pKa = 6.62MISQRR36 pKa = 11.84MLNQHH41 pKa = 6.9MISQHH46 pKa = 5.49MLNQHH51 pKa = 6.63MISQRR56 pKa = 11.84MVNQRR61 pKa = 11.84MVNQRR66 pKa = 11.84MVNQRR71 pKa = 11.84MVNQRR76 pKa = 11.84MISQRR81 pKa = 11.84MISQRR86 pKa = 11.84MISQRR91 pKa = 11.84MISQRR96 pKa = 11.84MINQRR101 pKa = 11.84MVNQRR106 pKa = 11.84MVNQRR111 pKa = 11.84MINQRR116 pKa = 11.84MVNQRR121 pKa = 11.84MISQRR126 pKa = 11.84LQIPRR131 pKa = 11.84MLHH134 pKa = 5.01QRR136 pKa = 11.84LQIPRR141 pKa = 11.84MLHH144 pKa = 5.01QRR146 pKa = 11.84LQIPRR151 pKa = 11.84MLHH154 pKa = 3.95QQ155 pKa = 4.25

Molecular weight: 19.51 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

10107

1826

11933

5546497

30

5579

464.8

51.39

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.577 ± 0.021

1.402 ± 0.008

5.765 ± 0.017

5.261 ± 0.02

3.53 ± 0.017

5.665 ± 0.021

2.839 ± 0.013

5.739 ± 0.018

4.96 ± 0.022

9.43 ± 0.025

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.452 ± 0.008

4.032 ± 0.011

5.39 ± 0.022

4.373 ± 0.022

5.217 ± 0.016

10.107 ± 0.031

6.541 ± 0.018

6.06 ± 0.017

0.994 ± 0.007

2.665 ± 0.012
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski