Fowl aviadenovirus B

Taxonomy: Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Aviadenovirus

Average proteome isoelectric point is 6.4

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 36 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4Y5G377|A0A4Y5G377_9ADEN PVII OS=Fowl aviadenovirus B OX=190062 PE=4 SV=1
GG1 pKa = 6.54QSAVSTGDD9 pKa = 3.16EE10 pKa = 4.3FFGDD14 pKa = 3.76EE15 pKa = 3.81VDD17 pKa = 4.39FAARR21 pKa = 11.84VTATVLADD29 pKa = 3.45NDD31 pKa = 3.58ASADD35 pKa = 3.94CSCGLDD41 pKa = 3.24TGKK44 pKa = 9.95NVCSLLSCHH53 pKa = 6.71CVILL57 pKa = 4.29

Molecular weight: 5.8 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4Y5G379|A0A4Y5G379_9ADEN ORF57 OS=Fowl aviadenovirus B OX=190062 PE=4 SV=1
MM1 pKa = 7.59SILVSPNDD9 pKa = 3.21NRR11 pKa = 11.84GWGMRR16 pKa = 11.84RR17 pKa = 11.84RR18 pKa = 11.84SRR20 pKa = 11.84SAMRR24 pKa = 11.84GVGTRR29 pKa = 11.84RR30 pKa = 11.84RR31 pKa = 11.84PRR33 pKa = 11.84RR34 pKa = 11.84SRR36 pKa = 11.84MTLRR40 pKa = 11.84TLLGLGTASRR50 pKa = 11.84RR51 pKa = 11.84RR52 pKa = 11.84RR53 pKa = 11.84GRR55 pKa = 11.84RR56 pKa = 11.84VGRR59 pKa = 11.84RR60 pKa = 11.84SRR62 pKa = 11.84PAATSSRR69 pKa = 11.84LVVVRR74 pKa = 11.84TSRR77 pKa = 11.84RR78 pKa = 11.84SRR80 pKa = 11.84RR81 pKa = 11.84RR82 pKa = 3.11

Molecular weight: 9.59 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

35

1

36

13173

33

1297

365.9

41.11

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.88 ± 0.385

1.928 ± 0.25

5.853 ± 0.225

6.065 ± 0.524

4.001 ± 0.216

6.566 ± 0.361

2.346 ± 0.18

3.917 ± 0.206

3.621 ± 0.316

8.768 ± 0.414

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.308 ± 0.177

4.061 ± 0.436

6.604 ± 0.293

3.575 ± 0.205

7.576 ± 0.585

7.098 ± 0.405

5.982 ± 0.394

6.399 ± 0.279

1.45 ± 0.13

4.001 ± 0.31
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski