Capybara microvirus Cap1_SP_115

Taxonomy: Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; unclassified Microviridae

Average proteome isoelectric point is 6.18

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 6 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4P8W4F8|A0A4P8W4F8_9VIRU Replication initiator protein OS=Capybara microvirus Cap1_SP_115 OX=2584808 PE=4 SV=1
MM1 pKa = 7.36ATNPLQPANHH11 pKa = 7.08AEE13 pKa = 4.21TLNPEE18 pKa = 4.06AQANNPSIRR27 pKa = 11.84FRR29 pKa = 11.84SPSNTFYY36 pKa = 10.96LPKK39 pKa = 9.99RR40 pKa = 11.84HH41 pKa = 6.39YY42 pKa = 9.21DD43 pKa = 3.49TIRR46 pKa = 11.84FGEE49 pKa = 4.01YY50 pKa = 9.48RR51 pKa = 11.84PVYY54 pKa = 8.82NLEE57 pKa = 4.26MIPNGRR63 pKa = 11.84YY64 pKa = 8.25MLQDD68 pKa = 3.32ANRR71 pKa = 11.84IEE73 pKa = 4.49SFTFASRR80 pKa = 11.84FMEE83 pKa = 4.27GLSYY87 pKa = 10.61TKK89 pKa = 10.36DD90 pKa = 3.36YY91 pKa = 10.96FQVPFSAILPRR102 pKa = 11.84NWEE105 pKa = 3.94KK106 pKa = 10.57IYY108 pKa = 10.63RR109 pKa = 11.84NPAFGDD115 pKa = 3.87DD116 pKa = 3.95VPDD119 pKa = 5.19DD120 pKa = 4.32SMSLINFQKK129 pKa = 10.49LFNDD133 pKa = 3.19IASRR137 pKa = 11.84LISQPSSLQDD147 pKa = 3.36LTFMLILPYY156 pKa = 10.46LFSRR160 pKa = 11.84GSLLDD165 pKa = 3.38SLGFPVVDD173 pKa = 5.14ISFLDD178 pKa = 3.78DD179 pKa = 3.49NGEE182 pKa = 3.77YY183 pKa = 10.5DD184 pKa = 4.43IIQEE188 pKa = 4.5IIDD191 pKa = 3.81TSGSFQLKK199 pKa = 10.3SPISSIPNFFYY210 pKa = 10.61KK211 pKa = 10.73VSDD214 pKa = 3.17ASTFNILINDD224 pKa = 4.39FLLNGYY230 pKa = 9.22SIISGPSDD238 pKa = 3.53FEE240 pKa = 4.27SLRR243 pKa = 11.84PLSAQWKK250 pKa = 9.91AKK252 pKa = 9.35FQALASSLAGSEE264 pKa = 4.53LISVASLYY272 pKa = 10.56AYY274 pKa = 9.95KK275 pKa = 9.37LTCAKK280 pKa = 10.39FYY282 pKa = 10.89TNDD285 pKa = 3.85NIDD288 pKa = 4.88PIYY291 pKa = 10.14MSQLWIDD298 pKa = 3.91SVQSLLSVSDD308 pKa = 3.54DD309 pKa = 3.61TQPTFNYY316 pKa = 10.13NGSKK320 pKa = 10.4YY321 pKa = 10.5LYY323 pKa = 10.12DD324 pKa = 3.9VLSLHH329 pKa = 6.74YY330 pKa = 10.38INEE333 pKa = 4.32KK334 pKa = 10.57LFSLLDD340 pKa = 3.56SDD342 pKa = 4.2YY343 pKa = 10.77TNALIALFGPEE354 pKa = 4.4HH355 pKa = 7.48VLIQQDD361 pKa = 3.93FFLSARR367 pKa = 11.84SRR369 pKa = 11.84PLAVGNVDD377 pKa = 2.82IHH379 pKa = 7.09VNTSSQSVSAIDD391 pKa = 3.37VTKK394 pKa = 10.89NITIQRR400 pKa = 11.84YY401 pKa = 8.23LNAVNRR407 pKa = 11.84LGNKK411 pKa = 6.29ITSYY415 pKa = 10.31MEE417 pKa = 5.29GIFSTQPQEE426 pKa = 4.27CPEE429 pKa = 4.19PVLLTSLRR437 pKa = 11.84YY438 pKa = 9.53DD439 pKa = 3.06VSTNQTTNTANDD451 pKa = 3.54QGNVTSLAQSNGSKK465 pKa = 10.23YY466 pKa = 10.9AFDD469 pKa = 4.08IFCSEE474 pKa = 3.94PSILLGIAHH483 pKa = 6.64FAIPKK488 pKa = 8.85VYY490 pKa = 10.08RR491 pKa = 11.84FAMDD495 pKa = 2.97MCKK498 pKa = 10.21YY499 pKa = 9.51HH500 pKa = 7.3ANRR503 pKa = 11.84FQFFNPMLEE512 pKa = 4.28NIGDD516 pKa = 3.83DD517 pKa = 4.82GIPVQCFDD525 pKa = 4.13FRR527 pKa = 11.84MPKK530 pKa = 10.3NLDD533 pKa = 3.45KK534 pKa = 11.36PNFGYY539 pKa = 8.42ITRR542 pKa = 11.84FGEE545 pKa = 4.13YY546 pKa = 10.45KK547 pKa = 9.87LTFDD551 pKa = 3.84EE552 pKa = 4.28AHH554 pKa = 6.56GGFMTNPLQSWIYY567 pKa = 10.37QGLDD571 pKa = 3.08ALDD574 pKa = 4.16AQSVINPFVIRR585 pKa = 11.84YY586 pKa = 8.5RR587 pKa = 11.84VGSMDD592 pKa = 3.65YY593 pKa = 10.24LYY595 pKa = 11.1SAVSPYY601 pKa = 9.93GPQWYY606 pKa = 8.93YY607 pKa = 11.22HH608 pKa = 6.08FIVRR612 pKa = 11.84NEE614 pKa = 4.11TNLTANLPLSYY625 pKa = 11.0NPGILL630 pKa = 3.62

Molecular weight: 71.5 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4P8W7U3|A0A4P8W7U3_9VIRU Uncharacterized protein OS=Capybara microvirus Cap1_SP_115 OX=2584808 PE=4 SV=1
MM1 pKa = 7.48KK2 pKa = 9.93KK3 pKa = 10.08VCVFDD8 pKa = 4.83CPPGMYY14 pKa = 10.27YY15 pKa = 10.32EE16 pKa = 4.47WLPHH20 pKa = 5.74SCIKK24 pKa = 10.42YY25 pKa = 8.78VRR27 pKa = 11.84KK28 pKa = 9.97VRR30 pKa = 11.84NNSNKK35 pKa = 8.94FHH37 pKa = 7.6AIRR40 pKa = 11.84YY41 pKa = 5.74TRR43 pKa = 11.84WLDD46 pKa = 3.25GLIYY50 pKa = 9.8TEE52 pKa = 4.21KK53 pKa = 9.78TVCSLCFLVPLGVNYY68 pKa = 10.46NPYY71 pKa = 10.03KK72 pKa = 10.46QLFF75 pKa = 3.65

Molecular weight: 9.0 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6

0

6

1702

75

630

283.7

32.35

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.463 ± 1.747

1.234 ± 0.655

6.169 ± 0.404

3.995 ± 0.477

6.639 ± 0.501

4.407 ± 0.406

1.528 ± 0.319

6.169 ± 0.592

5.464 ± 1.042

9.166 ± 0.824

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.821 ± 0.181

7.873 ± 0.384

4.759 ± 0.717

4.407 ± 1.058

4.054 ± 0.501

10.106 ± 1.064

4.113 ± 0.372

4.7 ± 0.47

0.881 ± 0.233

6.052 ± 0.406
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski