Planococcus halotolerans

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Bacilli; Bacillales; Planococcaceae; Planococcus

Average proteome isoelectric point is 5.91

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3547 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A365KRL2|A0A365KRL2_9BACL Transcriptional regulator OS=Planococcus halotolerans OX=2233542 GN=DP120_13310 PE=4 SV=1
MM1 pKa = 7.42KK2 pKa = 10.13KK3 pKa = 10.15KK4 pKa = 10.68AIGVLATSALILAGCGSTGGEE25 pKa = 3.79EE26 pKa = 4.15SEE28 pKa = 4.9PIVIGGKK35 pKa = 8.9PWTEE39 pKa = 4.0QYY41 pKa = 10.81ILPHH45 pKa = 7.07ILGQYY50 pKa = 9.7IEE52 pKa = 5.03ANSDD56 pKa = 3.49YY57 pKa = 10.43TVEE60 pKa = 4.22YY61 pKa = 10.34EE62 pKa = 4.31DD63 pKa = 4.27GLGEE67 pKa = 4.39VSILTPALEE76 pKa = 4.14QGDD79 pKa = 3.22IDD81 pKa = 6.02LYY83 pKa = 11.36VEE85 pKa = 4.11YY86 pKa = 9.92TGTGLKK92 pKa = 10.37DD93 pKa = 3.33VLKK96 pKa = 10.72QEE98 pKa = 4.44SEE100 pKa = 4.16PGQSSEE106 pKa = 4.38EE107 pKa = 3.72VLQRR111 pKa = 11.84VRR113 pKa = 11.84EE114 pKa = 4.56GYY116 pKa = 10.24EE117 pKa = 3.78EE118 pKa = 4.14EE119 pKa = 5.86LNATWLEE126 pKa = 3.82PLGFEE131 pKa = 4.79NGYY134 pKa = 7.77TLAYY138 pKa = 10.14SKK140 pKa = 11.15DD141 pKa = 3.36SGYY144 pKa = 10.96DD145 pKa = 3.08AEE147 pKa = 4.91TYY149 pKa = 11.0SDD151 pKa = 3.91LAEE154 pKa = 4.29ISQTEE159 pKa = 4.27DD160 pKa = 2.94MSFGAPHH167 pKa = 7.25PFYY170 pKa = 10.73EE171 pKa = 4.37RR172 pKa = 11.84QGDD175 pKa = 4.35GYY177 pKa = 11.06DD178 pKa = 4.39DD179 pKa = 6.31LIATYY184 pKa = 9.54PFEE187 pKa = 5.16FSATDD192 pKa = 3.43SFDD195 pKa = 3.54PAIMYY200 pKa = 7.64EE201 pKa = 4.0AVNNGEE207 pKa = 4.01VDD209 pKa = 4.12VIPAFTTDD217 pKa = 2.92SRR219 pKa = 11.84IGLFDD224 pKa = 5.22LEE226 pKa = 4.5TTEE229 pKa = 5.62DD230 pKa = 3.96DD231 pKa = 4.31LSFFPKK237 pKa = 9.98YY238 pKa = 10.1DD239 pKa = 3.42AAPVVRR245 pKa = 11.84LEE247 pKa = 4.41ALEE250 pKa = 4.09QYY252 pKa = 10.55PEE254 pKa = 4.37LEE256 pKa = 4.11SLLNEE261 pKa = 4.02LAGQISEE268 pKa = 4.42EE269 pKa = 4.1EE270 pKa = 4.08MLAMNARR277 pKa = 11.84VDD279 pKa = 3.41IDD281 pKa = 3.25QDD283 pKa = 3.68QPQDD287 pKa = 3.03IARR290 pKa = 11.84DD291 pKa = 3.63FLIEE295 pKa = 4.06KK296 pKa = 10.46GLIEE300 pKa = 4.14EE301 pKa = 4.41

Molecular weight: 33.39 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A365L8K6|A0A365L8K6_9BACL DNA mismatch repair protein MutT OS=Planococcus halotolerans OX=2233542 GN=DP120_03900 PE=4 SV=1
MM1 pKa = 7.61TLRR4 pKa = 11.84TYY6 pKa = 10.57QPNKK10 pKa = 8.74RR11 pKa = 11.84KK12 pKa = 9.54HH13 pKa = 5.99SKK15 pKa = 8.91VHH17 pKa = 5.68GFRR20 pKa = 11.84ARR22 pKa = 11.84MSTKK26 pKa = 9.71NGRR29 pKa = 11.84RR30 pKa = 11.84VIAARR35 pKa = 11.84RR36 pKa = 11.84RR37 pKa = 11.84KK38 pKa = 8.8GRR40 pKa = 11.84KK41 pKa = 8.75VLSAA45 pKa = 4.05

Molecular weight: 5.31 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3547

0

3547

1025973

34

2657

289.3

32.32

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.008 ± 0.043

0.56 ± 0.011

5.395 ± 0.034

8.087 ± 0.055

4.602 ± 0.035

7.139 ± 0.039

1.971 ± 0.02

7.305 ± 0.038

6.151 ± 0.034

9.679 ± 0.044

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.936 ± 0.021

4.008 ± 0.029

3.685 ± 0.023

3.55 ± 0.025

4.204 ± 0.033

5.986 ± 0.029

5.386 ± 0.036

6.922 ± 0.03

1.05 ± 0.014

3.374 ± 0.027
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski