Sutterella megalosphaeroides

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Sutterella

Average proteome isoelectric point is 6.37

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2112 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2Z6IE84|A0A2Z6IE84_9BURK Urocanate reductase OS=Sutterella megalosphaeroides OX=2494234 GN=urdA_3 PE=3 SV=1
MM1 pKa = 7.64TEE3 pKa = 5.08LDD5 pKa = 4.85DD6 pKa = 6.35PDD8 pKa = 6.44DD9 pKa = 4.22EE10 pKa = 6.06DD11 pKa = 6.11PYY13 pKa = 11.57DD14 pKa = 4.06EE15 pKa = 4.78EE16 pKa = 5.6DD17 pKa = 4.09NRR19 pKa = 11.84TLDD22 pKa = 3.61EE23 pKa = 4.79RR24 pKa = 11.84MLDD27 pKa = 3.55AYY29 pKa = 10.3GSRR32 pKa = 11.84SEE34 pKa = 4.29WEE36 pKa = 3.38ADD38 pKa = 3.28AAGEE42 pKa = 4.25TDD44 pKa = 3.82WYY46 pKa = 10.52ADD48 pKa = 3.8PYY50 pKa = 11.28RR51 pKa = 11.84KK52 pKa = 9.42FLEE55 pKa = 4.36NGCRR59 pKa = 11.84GILTYY64 pKa = 10.89EE65 pKa = 4.26EE66 pKa = 4.17AVEE69 pKa = 3.83AHH71 pKa = 6.32KK72 pKa = 10.33WSTGIDD78 pKa = 3.64PDD80 pKa = 4.68YY81 pKa = 9.42VTSWLEE87 pKa = 3.49IDD89 pKa = 3.1WVKK92 pKa = 10.57RR93 pKa = 11.84QRR95 pKa = 11.84EE96 pKa = 4.15QIVEE100 pKa = 4.08CEE102 pKa = 3.88DD103 pKa = 4.31FIRR106 pKa = 11.84AVFGLSLDD114 pKa = 4.22EE115 pKa = 4.33YY116 pKa = 10.55CALYY120 pKa = 10.47LPYY123 pKa = 10.91EE124 pKa = 3.96PMIRR128 pKa = 11.84LAYY131 pKa = 10.09

Molecular weight: 15.51 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2Z6I7Q4|A0A2Z6I7Q4_9BURK 50S ribosomal protein L10 OS=Sutterella megalosphaeroides OX=2494234 GN=rplJ PE=3 SV=1
MM1 pKa = 6.85ATKK4 pKa = 9.51RR5 pKa = 11.84TYY7 pKa = 10.39QPSKK11 pKa = 8.92VKK13 pKa = 10.35RR14 pKa = 11.84ARR16 pKa = 11.84THH18 pKa = 5.71GFLVRR23 pKa = 11.84SRR25 pKa = 11.84TKK27 pKa = 9.76GGRR30 pKa = 11.84RR31 pKa = 11.84VLARR35 pKa = 11.84RR36 pKa = 11.84RR37 pKa = 11.84AKK39 pKa = 10.14GRR41 pKa = 11.84HH42 pKa = 4.25VLALL46 pKa = 3.77

Molecular weight: 5.33 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2112

0

2112

763480

40

4012

361.5

39.42

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

12.006 ± 0.065

1.08 ± 0.022

5.515 ± 0.044

6.961 ± 0.059

3.867 ± 0.036

8.014 ± 0.059

1.791 ± 0.023

4.364 ± 0.044

4.1 ± 0.055

9.991 ± 0.056

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.334 ± 0.027

2.789 ± 0.032

4.859 ± 0.047

2.291 ± 0.025

7.13 ± 0.073

5.576 ± 0.05

5.881 ± 0.051

7.846 ± 0.042

1.254 ± 0.019

2.35 ± 0.028
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski