Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) (Methanogenium bourgense)

Taxonomy: cellular organisms; Archaea; Euryarchaeota; Stenosarchaea group; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus; Methanoculleus bourgensis

Average proteome isoelectric point is 5.96

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2575 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    

Protein with the lowest isoelectric point:
>tr|I7KDV4|I7KDV4_METBM Hydrogenase 1 maturation protease OS=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) OX=1201294 GN=hycI PE=4 SV=2
MM1 pKa = 7.74DD2 pKa = 5.2RR3 pKa = 11.84SRR5 pKa = 11.84VIAGAIVILLAVAVLAVPVAAEE27 pKa = 4.09EE28 pKa = 4.54YY29 pKa = 10.88VFVTKK34 pKa = 10.1WGEE37 pKa = 3.93YY38 pKa = 8.58GTGEE42 pKa = 4.23GFKK45 pKa = 10.93DD46 pKa = 3.63PFDD49 pKa = 3.8IAIDD53 pKa = 3.97TAGHH57 pKa = 6.34IYY59 pKa = 8.73ITEE62 pKa = 3.84TDD64 pKa = 3.62ANHH67 pKa = 6.18ILQRR71 pKa = 11.84ILKK74 pKa = 9.12LDD76 pKa = 3.18SSMNFITKK84 pKa = 8.8WGSYY88 pKa = 7.84GTGNGQFNGPQGIAVNAAGNVYY110 pKa = 10.43VADD113 pKa = 4.42TYY115 pKa = 9.83NHH117 pKa = 7.6RR118 pKa = 11.84IQKK121 pKa = 9.75FDD123 pKa = 3.1SSGNLLTKK131 pKa = 9.37WGSWGSGDD139 pKa = 4.14GQFSYY144 pKa = 10.58PDD146 pKa = 3.6SVAVDD151 pKa = 3.35AAGNVYY157 pKa = 10.42VSDD160 pKa = 3.96TNNGRR165 pKa = 11.84IQKK168 pKa = 9.52FDD170 pKa = 3.43SDD172 pKa = 4.0GTFLGKK178 pKa = 9.32WGSWGSGDD186 pKa = 3.38GQLRR190 pKa = 11.84FSQDD194 pKa = 3.26LVVDD198 pKa = 4.21AAGNIYY204 pKa = 9.32VAEE207 pKa = 4.22YY208 pKa = 10.46GNHH211 pKa = 7.16RR212 pKa = 11.84IQKK215 pKa = 9.55FDD217 pKa = 3.87SNGNFLWKK225 pKa = 10.09KK226 pKa = 9.5GSSGSGDD233 pKa = 3.57GQFLSPYY240 pKa = 9.73GITVDD245 pKa = 3.28AAGNVYY251 pKa = 10.41VADD254 pKa = 3.82TWNHH258 pKa = 7.0RR259 pKa = 11.84IQKK262 pKa = 9.56FDD264 pKa = 3.09SSGNFLTKK272 pKa = 9.65WGSRR276 pKa = 11.84GSGNGQFSEE285 pKa = 4.43PFGVAVDD292 pKa = 3.82SAGNVYY298 pKa = 8.42VTEE301 pKa = 4.42RR302 pKa = 11.84GNDD305 pKa = 3.32RR306 pKa = 11.84VQMFAPASALTVTGIVPASGLNTGSVSITDD336 pKa = 3.72LSGTGFANGATVNLTRR352 pKa = 11.84TGEE355 pKa = 4.26TNIVATDD362 pKa = 3.41VSVLSSTQITCTLDD376 pKa = 3.07LTGAVAGSWNVVVTNPDD393 pKa = 3.13NQFATLTDD401 pKa = 3.69GFTVNAEE408 pKa = 3.46NRR410 pKa = 11.84APVAEE415 pKa = 5.2DD416 pKa = 3.09DD417 pKa = 4.41TYY419 pKa = 9.7TTDD422 pKa = 3.77EE423 pKa = 4.57DD424 pKa = 4.22TLLTISAPGVLANDD438 pKa = 3.76NDD440 pKa = 4.41PDD442 pKa = 4.47GDD444 pKa = 4.02ALTAVLVDD452 pKa = 3.99DD453 pKa = 4.8VSNGTLTLNADD464 pKa = 3.48GSFTYY469 pKa = 10.58LPNTGFSDD477 pKa = 3.2IDD479 pKa = 3.77TFTYY483 pKa = 8.55TANDD487 pKa = 3.9GTQSSNVATVSINVNPASAVLTSIVVTPVQPILEE521 pKa = 4.34IGGTQQFTATGYY533 pKa = 10.12DD534 pKa = 3.35QYY536 pKa = 11.15GTPLPTGEE544 pKa = 4.62IVWSSTNTTVGTIDD558 pKa = 3.17ATGLFTATAEE568 pKa = 4.3GSTTVTATAGEE579 pKa = 4.26VSGTAEE585 pKa = 4.1VTVNPALTVTGIVPASGPNTGNVSITNLSGTGFVDD620 pKa = 4.44GATVNLTRR628 pKa = 11.84TGEE631 pKa = 4.26TNIVATDD638 pKa = 3.41VSVLSSTQITCTLDD652 pKa = 3.24LTGAAAGSWNVVVTNPDD669 pKa = 2.55GRR671 pKa = 11.84YY672 pKa = 10.25DD673 pKa = 3.45ILSDD677 pKa = 3.65GFAVVAASEE686 pKa = 4.23IVTFNDD692 pKa = 3.24PNLEE696 pKa = 4.03ATVRR700 pKa = 11.84GALGKK705 pKa = 9.62PVGDD709 pKa = 3.48ITADD713 pKa = 3.44DD714 pKa = 3.87MATFITLGADD724 pKa = 2.75WRR726 pKa = 11.84GIRR729 pKa = 11.84DD730 pKa = 3.66LSGLEE735 pKa = 3.91YY736 pKa = 10.66AVNLQHH742 pKa = 7.68LYY744 pKa = 10.25LQQNRR749 pKa = 11.84QISDD753 pKa = 4.05LGPLAGLTDD762 pKa = 4.68LQTLDD767 pKa = 3.55LWNNQISDD775 pKa = 4.32LSPLAGLTNLSVLLLGSNQISDD797 pKa = 3.61IGPLAGLTDD806 pKa = 4.23LQRR809 pKa = 11.84LHH811 pKa = 7.56LYY813 pKa = 10.46DD814 pKa = 3.53NQIRR818 pKa = 11.84DD819 pKa = 3.63IGPLAGLTNLWEE831 pKa = 3.94LRR833 pKa = 11.84LYY835 pKa = 10.85NNQIRR840 pKa = 11.84DD841 pKa = 3.57IGPLVANSGLGSGDD855 pKa = 3.48EE856 pKa = 4.86VYY858 pKa = 10.8LQYY861 pKa = 11.34NYY863 pKa = 11.17LDD865 pKa = 4.18LTPGSADD872 pKa = 3.31MNDD875 pKa = 2.83IQTLQSRR882 pKa = 11.84GVYY885 pKa = 8.77VAYY888 pKa = 9.89EE889 pKa = 4.02PQNPVPTYY897 pKa = 10.22TLDD900 pKa = 3.64LAVNPEE906 pKa = 3.93GGGTVTGAGTYY917 pKa = 9.84KK918 pKa = 10.78AGDD921 pKa = 3.91TVPITATPNEE931 pKa = 3.83GWEE934 pKa = 4.21FVNWTNEE941 pKa = 3.44TGATVSSEE949 pKa = 4.17PNFDD953 pKa = 3.5YY954 pKa = 10.84PMPEE958 pKa = 3.72GDD960 pKa = 3.79VALTANFEE968 pKa = 4.47GEE970 pKa = 4.52AITYY974 pKa = 7.91TLGLAVNPAGSGTVTGAGTYY994 pKa = 10.21AAGDD998 pKa = 4.11TVSVTATPNDD1008 pKa = 3.93GYY1010 pKa = 9.63TFVNWTDD1017 pKa = 3.45EE1018 pKa = 4.19TDD1020 pKa = 3.76VTVSTAASFDD1030 pKa = 3.5YY1031 pKa = 10.74TMPDD1035 pKa = 2.86GDD1037 pKa = 3.87VTLTANFAAITYY1049 pKa = 8.43TLDD1052 pKa = 3.49LAVNPEE1058 pKa = 3.99GSGTATGAGTYY1069 pKa = 10.09AAGATVPITATPNEE1083 pKa = 4.08GWEE1086 pKa = 4.05FANWTDD1092 pKa = 3.56GTGATVSSEE1101 pKa = 3.8ATFDD1105 pKa = 3.54YY1106 pKa = 10.86TMPAQEE1112 pKa = 4.32TALTANFEE1120 pKa = 4.16PAPPVLARR1128 pKa = 11.84IEE1130 pKa = 4.1VSPAEE1135 pKa = 4.01ATLEE1139 pKa = 4.14VGATRR1144 pKa = 11.84QFTATGYY1151 pKa = 10.08DD1152 pKa = 3.37QYY1154 pKa = 11.8GNPLSVGEE1162 pKa = 4.53IVWSSTNEE1170 pKa = 3.67AVGTIDD1176 pKa = 3.56ASGMFTALAAGSTEE1190 pKa = 4.47LVAEE1194 pKa = 4.35ANGISGKK1201 pKa = 10.84ANVTVTPAAPVLTSIAVTPEE1221 pKa = 3.85SPALEE1226 pKa = 4.43IGTTQQFTATCYY1238 pKa = 10.15DD1239 pKa = 3.23QYY1241 pKa = 10.97GQTMPDD1247 pKa = 3.31MAVSWSSSNTSVGTIEE1263 pKa = 4.28SNGMFTALTAGSTTVTASAAGVSGQTVATVNPAAPVVTRR1302 pKa = 11.84IAVSPPSVTLDD1313 pKa = 3.29IGDD1316 pKa = 3.81TQAFVATCYY1325 pKa = 10.42DD1326 pKa = 3.23QYY1328 pKa = 10.97EE1329 pKa = 4.3NEE1331 pKa = 4.23MPGTSVSWASDD1342 pKa = 3.09STTVGTIDD1350 pKa = 3.17ATGLFTATAEE1360 pKa = 4.3GSTTVTATAGDD1371 pKa = 3.63VSGTAEE1377 pKa = 4.03VRR1379 pKa = 11.84VNPALTVTGIVPASGPNTGPVSITDD1404 pKa = 3.71LSGTGFADD1412 pKa = 4.16GATVKK1417 pKa = 9.63LTRR1420 pKa = 11.84DD1421 pKa = 3.34GEE1423 pKa = 4.18ADD1425 pKa = 3.15IVATDD1430 pKa = 3.64VAVLSPTQITCTLDD1444 pKa = 3.16LTGAAVGTWNVVVTNPDD1461 pKa = 2.99EE1462 pKa = 4.45QYY1464 pKa = 11.29DD1465 pKa = 3.73ILSDD1469 pKa = 3.81GFAVVAASEE1478 pKa = 4.52VVTFNDD1484 pKa = 3.69PNLEE1488 pKa = 3.85AAVRR1492 pKa = 11.84QEE1494 pKa = 3.65LSKK1497 pKa = 11.07PKK1499 pKa = 10.75GDD1501 pKa = 3.28ITADD1505 pKa = 3.42DD1506 pKa = 4.1MATLTRR1512 pKa = 11.84LSAAGRR1518 pKa = 11.84GIRR1521 pKa = 11.84DD1522 pKa = 3.53LSGLEE1527 pKa = 4.0YY1528 pKa = 10.64AVNLQTLYY1536 pKa = 10.51ISNNQISDD1544 pKa = 4.09LSPLAGLTNLQTLWLQDD1561 pKa = 3.53NQVSDD1566 pKa = 4.43LSPLAGLTNLQRR1578 pKa = 11.84LWLNQNQIRR1587 pKa = 11.84DD1588 pKa = 3.78VSPLAGLTNLRR1599 pKa = 11.84EE1600 pKa = 4.02LLLAVNQISDD1610 pKa = 4.26LSPLAGLTNLGYY1622 pKa = 10.21VQLYY1626 pKa = 9.85RR1627 pKa = 11.84NQISDD1632 pKa = 4.26LSPLAGLTNLGYY1644 pKa = 10.21VQLYY1648 pKa = 9.85RR1649 pKa = 11.84NQISDD1654 pKa = 4.26LSPLAGLTNLYY1665 pKa = 10.49FLDD1668 pKa = 3.21ISYY1671 pKa = 10.43NQISDD1676 pKa = 4.26LSPLASLTNLYY1687 pKa = 10.55FLDD1690 pKa = 3.21ISYY1693 pKa = 10.4NQISDD1698 pKa = 3.68ISPLAGLTRR1707 pKa = 11.84LSRR1710 pKa = 11.84LSLDD1714 pKa = 3.46NNQISDD1720 pKa = 3.8ISPLAGLINLYY1731 pKa = 10.12VLNLNYY1737 pKa = 10.58NQIRR1741 pKa = 11.84DD1742 pKa = 3.76ISPLVANSGLAGDD1755 pKa = 5.2DD1756 pKa = 3.85VYY1758 pKa = 11.61LQYY1761 pKa = 11.36NYY1763 pKa = 11.1LDD1765 pKa = 4.08LTPGSAAMNDD1775 pKa = 3.04IQTLQSRR1782 pKa = 11.84GVYY1785 pKa = 9.2VVYY1788 pKa = 10.25EE1789 pKa = 4.13PQHH1792 pKa = 6.07EE1793 pKa = 4.56VTKK1796 pKa = 9.79YY1797 pKa = 9.42TLDD1800 pKa = 3.59LAVNPEE1806 pKa = 3.77GSGTVTGAGTYY1817 pKa = 9.49AAGYY1821 pKa = 6.28TVSITATPNEE1831 pKa = 4.02GWEE1834 pKa = 4.05FANWTDD1840 pKa = 3.56GTGATVSSEE1849 pKa = 3.95ATFDD1853 pKa = 3.65YY1854 pKa = 10.73PMPARR1859 pKa = 11.84DD1860 pKa = 3.27TALIANFEE1868 pKa = 4.18PAPPVLTRR1876 pKa = 11.84IDD1878 pKa = 3.7VSPVEE1883 pKa = 4.06AALEE1887 pKa = 4.14VGEE1890 pKa = 4.41TRR1892 pKa = 11.84QFTATGYY1899 pKa = 10.0DD1900 pKa = 3.26QYY1902 pKa = 11.71GNTIPTGEE1910 pKa = 4.37IVWSSTNEE1918 pKa = 3.67AVGTIDD1924 pKa = 3.56ASGMFTALAAGSTEE1938 pKa = 4.47LVAEE1942 pKa = 4.35ANGISGKK1949 pKa = 10.84ANVTVTPAAPVLTSIAVTPEE1969 pKa = 3.84SPALEE1974 pKa = 4.25VGTTQQFTATCYY1986 pKa = 10.15DD1987 pKa = 3.23QYY1989 pKa = 10.7GQTMPEE1995 pKa = 4.14VTVSWSSSNTSVGTIEE2011 pKa = 4.28SNGMFTALTAGSTTVTASAAGISGQTVATVNPAAPAVTRR2050 pKa = 11.84IAVSPLSVTLDD2061 pKa = 3.15IGDD2064 pKa = 3.81TQAFVATCYY2073 pKa = 10.42DD2074 pKa = 3.23QYY2076 pKa = 10.97EE2077 pKa = 4.3NEE2079 pKa = 4.23MPGTSVSWASDD2090 pKa = 3.09STTVGTIDD2098 pKa = 3.17ATGLFTATAEE2108 pKa = 4.42GSATVTATAGDD2119 pKa = 3.37ISGTAEE2125 pKa = 4.01VAVNPAPPVLTSISVSPAAPTIDD2148 pKa = 5.02AGDD2151 pKa = 3.89TQQFTATCYY2160 pKa = 10.15DD2161 pKa = 3.23QYY2163 pKa = 10.7GQTMPEE2169 pKa = 4.14VTVSWSSSNISVGTIEE2185 pKa = 4.36SNGMFTALTAGSTTVTASAEE2205 pKa = 4.63GISGQAVATVNLAAPVITRR2224 pKa = 11.84IAVSPPSVTLDD2235 pKa = 2.95IGDD2238 pKa = 3.74MQTFVATCYY2247 pKa = 10.33DD2248 pKa = 3.28QYY2250 pKa = 10.97EE2251 pKa = 4.31NEE2253 pKa = 4.27MPGTDD2258 pKa = 3.87VSWSSDD2264 pKa = 3.28DD2265 pKa = 3.77TTVGTIDD2272 pKa = 3.19ATGLFTATAEE2282 pKa = 4.42GSATVTATAGEE2293 pKa = 4.26VSGTAEE2299 pKa = 4.15VTVNPAPPVLTSISVSPAAPTIDD2322 pKa = 3.49VGEE2325 pKa = 4.38TQQFTAICYY2334 pKa = 8.49DD2335 pKa = 3.36QYY2337 pKa = 11.41GAPISDD2343 pKa = 3.7VSVIWSSEE2351 pKa = 3.71NEE2353 pKa = 4.28TVGTIDD2359 pKa = 3.19TSGLFTAIEE2368 pKa = 4.17EE2369 pKa = 4.53GATTITASANGISGTATVTVTPAPRR2394 pKa = 11.84VLTTVDD2400 pKa = 3.55VSPATADD2407 pKa = 3.11IAVGEE2412 pKa = 4.54TEE2414 pKa = 4.87QFTATCYY2421 pKa = 10.0DD2422 pKa = 3.37QNGEE2426 pKa = 4.19VMPDD2430 pKa = 3.41VSVTWSSSNEE2440 pKa = 3.82AVGTMTAGGIFTAHH2454 pKa = 6.46SEE2456 pKa = 4.19GATTVTASAEE2466 pKa = 4.32GVSGSASVTVRR2477 pKa = 11.84RR2478 pKa = 11.84VNTAPIAVDD2487 pKa = 4.08DD2488 pKa = 4.83AFTTNIRR2495 pKa = 11.84TQLTVPAPGVLEE2507 pKa = 4.61NDD2509 pKa = 3.41TDD2511 pKa = 4.0SDD2513 pKa = 4.47GDD2515 pKa = 3.91VLTAALVSKK2524 pKa = 10.05PSNGVLTLNTDD2535 pKa = 3.15GSFTYY2540 pKa = 10.01IPKK2543 pKa = 10.72GNFIGTDD2550 pKa = 3.01TFTYY2554 pKa = 9.75KK2555 pKa = 11.02ANDD2558 pKa = 3.53GSLNSSVATVTITVLATNHH2577 pKa = 6.07APIAADD2583 pKa = 3.49DD2584 pKa = 4.3TVTMTQDD2591 pKa = 2.8TTYY2594 pKa = 10.82AAPAPGVLEE2603 pKa = 4.45NDD2605 pKa = 3.26QDD2607 pKa = 4.2PDD2609 pKa = 3.78GDD2611 pKa = 4.1TVTAKK2616 pKa = 10.52LVSKK2620 pKa = 8.85VTYY2623 pKa = 10.57GSLKK2627 pKa = 10.14LKK2629 pKa = 10.46KK2630 pKa = 9.86DD2631 pKa = 3.31GSFTYY2636 pKa = 10.0IPKK2639 pKa = 10.16PGFTGEE2645 pKa = 5.22DD2646 pKa = 3.27SFTYY2650 pKa = 8.69QTSDD2654 pKa = 2.99GKK2656 pKa = 10.94LSSDD2660 pKa = 2.8IATVRR2665 pKa = 11.84ITVEE2669 pKa = 3.93PTAVIPPVADD2679 pKa = 5.57FSASPLGGKK2688 pKa = 10.08APVFVQFTDD2697 pKa = 3.42TSTGTINSWTWTFGDD2712 pKa = 4.18GGTSTEE2718 pKa = 3.93QNPQYY2723 pKa = 10.96KK2724 pKa = 7.94YY2725 pKa = 9.13TRR2727 pKa = 11.84PGTYY2731 pKa = 8.8TVSLTVTGPGGSDD2744 pKa = 2.72TKK2746 pKa = 10.81TVTDD2750 pKa = 4.3YY2751 pKa = 11.3IQVTGKK2757 pKa = 10.39KK2758 pKa = 9.75AA2759 pKa = 2.93

Molecular weight:
285.87 kDa
Isoelectric point according different methods:






Protein with the highest isoelectric point:
>tr|W6PQI5|W6PQI5_METBM Uncharacterized protein OS=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) OX=1201294 GN=BN140_3046 PE=4 SV=1
MM1 pKa = 7.38PTTVHH6 pKa = 6.52CYY8 pKa = 10.18VGEE11 pKa = 4.34TEE13 pKa = 4.73NGPDD17 pKa = 3.95PAPGFAIPDD26 pKa = 4.18FKK28 pKa = 11.3QLMRR32 pKa = 11.84FQQRR36 pKa = 11.84LNLTGIYY43 pKa = 9.77PGIQCIPGHH52 pKa = 5.37VRR54 pKa = 11.84ANGGIPSLPDD64 pKa = 3.13RR65 pKa = 11.84WCPPGSGGRR74 pKa = 11.84TPMHH78 pKa = 6.74AGFGATRR85 pKa = 11.84YY86 pKa = 9.63KK87 pKa = 10.41PRR89 pKa = 11.84RR90 pKa = 11.84QCGGRR95 pKa = 11.84DD96 pKa = 3.49SNRR99 pKa = 11.84KK100 pKa = 8.65FPRR103 pKa = 11.84PRR105 pKa = 11.84APKK108 pKa = 10.46SLDD111 pKa = 3.03IPSRR115 pKa = 3.63

Molecular weight:
12.64 kDa
Isoelectric point according different methods:






Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2575

0

2575

768769

31

2759

298.6

32.76

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.902 ± 0.065

1.314 ± 0.024

5.765 ± 0.035

6.935 ± 0.055

3.542 ± 0.028

8.469 ± 0.046

1.967 ± 0.024

6.335 ± 0.042

3.352 ± 0.041

9.402 ± 0.053

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.408 ± 0.023

2.738 ± 0.036

5.089 ± 0.035

2.508 ± 0.023

7.109 ± 0.071

5.21 ± 0.04

5.679 ± 0.066

8.182 ± 0.045

1.047 ± 0.02

3.048 ± 0.025

Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski