Phialophora attinorum

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; Eurotiomycetes; Chaetothyriomycetidae; Chaetothyriales; Herpotrichiellaceae; Phialophora

Average proteome isoelectric point is 6.43

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 11848 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0N1H9Y1|A0A0N1H9Y1_9EURO BTB domain-containing protein OS=Phialophora attinorum OX=1664694 GN=AB675_10658 PE=4 SV=1
MM1 pKa = 6.9KK2 pKa = 9.22TAATAIVLAIWVAAPILAQDD22 pKa = 4.14IDD24 pKa = 4.22NNDD27 pKa = 3.5IPTQCATVCSNIVAVSDD44 pKa = 3.57DD45 pKa = 3.68CDD47 pKa = 3.23RR48 pKa = 11.84AFDD51 pKa = 4.26RR52 pKa = 11.84DD53 pKa = 3.97SDD55 pKa = 4.09EE56 pKa = 4.38LACMCQAEE64 pKa = 5.0GAQQVIPICAACIAFYY80 pKa = 11.01DD81 pKa = 4.47DD82 pKa = 5.92DD83 pKa = 4.84EE84 pKa = 6.62DD85 pKa = 5.38DD86 pKa = 6.03RR87 pKa = 11.84RR88 pKa = 11.84EE89 pKa = 3.98QDD91 pKa = 3.01NDD93 pKa = 3.57AGDD96 pKa = 3.82LRR98 pKa = 11.84RR99 pKa = 11.84DD100 pKa = 3.72CNFASTTYY108 pKa = 10.6DD109 pKa = 3.38PNVTFSQAAMTAATSLTSSSRR130 pKa = 11.84GANASSAVGSAATAATSATGSAASEE155 pKa = 3.93ASSAIGSLTSAAATATATGNTAGGVSVDD183 pKa = 3.57GGRR186 pKa = 11.84GAMVAGVGLLAAAAFLL202 pKa = 4.29

Molecular weight: 20.11 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0N0NJL9|A0A0N0NJL9_9EURO Uncharacterized protein OS=Phialophora attinorum OX=1664694 GN=AB675_3606 PE=4 SV=1
MM1 pKa = 7.56LGTRR5 pKa = 11.84RR6 pKa = 11.84SPRR9 pKa = 11.84TTRR12 pKa = 11.84HH13 pKa = 4.23TTTTTKK19 pKa = 10.1PSLMSRR25 pKa = 11.84LTGGRR30 pKa = 11.84SRR32 pKa = 11.84KK33 pKa = 6.35THH35 pKa = 4.85TVSTTSGPRR44 pKa = 11.84TTHH47 pKa = 5.26SRR49 pKa = 11.84RR50 pKa = 11.84AAPVHH55 pKa = 4.61HH56 pKa = 6.18QRR58 pKa = 11.84RR59 pKa = 11.84KK60 pKa = 7.98TSIGDD65 pKa = 3.66KK66 pKa = 10.55VAGALKK72 pKa = 10.14KK73 pKa = 10.13VQGSLTHH80 pKa = 6.38NPAKK84 pKa = 10.26KK85 pKa = 9.9AAGTRR90 pKa = 11.84RR91 pKa = 11.84MHH93 pKa = 5.68GTDD96 pKa = 2.87GRR98 pKa = 11.84GSRR101 pKa = 11.84RR102 pKa = 11.84VYY104 pKa = 10.87

Molecular weight: 11.39 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

11848

0

11848

5661895

39

6066

477.9

52.74

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.125 ± 0.018

1.14 ± 0.008

5.854 ± 0.015

5.976 ± 0.022

3.604 ± 0.014

6.966 ± 0.024

2.404 ± 0.011

4.755 ± 0.017

4.75 ± 0.02

8.771 ± 0.026

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.2 ± 0.008

3.583 ± 0.012

5.985 ± 0.022

4.095 ± 0.015

6.088 ± 0.022

8.088 ± 0.03

6.175 ± 0.02

6.199 ± 0.022

1.497 ± 0.009

2.746 ± 0.013
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski