Kwoniella pini CBS 10737

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Kwoniella; Kwoniella pini

Average proteome isoelectric point is 6.5

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 7827 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1B9ICF3|A0A1B9ICF3_9TREE Prephenate dehydrogenase [NADP(+)] OS=Kwoniella pini CBS 10737 OX=1296096 GN=I206_00415 PE=3 SV=1
MM1 pKa = 7.27FSKK4 pKa = 10.84ALFLLPLLPLLSAAPLPYY22 pKa = 9.47PLLGAGPISDD32 pKa = 4.74LDD34 pKa = 3.94SVINPLTQDD43 pKa = 3.75DD44 pKa = 4.88NLPGLPVTPGDD55 pKa = 3.96PSPTLSNTGDD65 pKa = 3.27GSLINGLLDD74 pKa = 3.49TVEE77 pKa = 4.76TITGPLNVSIGANVDD92 pKa = 3.68LLGINTTVGLNVDD105 pKa = 4.14LDD107 pKa = 4.19DD108 pKa = 5.52DD109 pKa = 4.35EE110 pKa = 6.09EE111 pKa = 4.62MICGPVNGYY120 pKa = 8.61WSNQQYY126 pKa = 10.87NIPCACWSDD135 pKa = 3.38SRR137 pKa = 11.84GLVISAQLEE146 pKa = 4.01ADD148 pKa = 3.67LGLDD152 pKa = 3.35QVEE155 pKa = 4.41GLDD158 pKa = 3.79TFLQAQIEE166 pKa = 4.45FGGEE170 pKa = 3.62RR171 pKa = 11.84FTYY174 pKa = 9.36PAYY177 pKa = 11.21SMPTCDD183 pKa = 4.14GDD185 pKa = 4.7GGFNCPGGRR194 pKa = 11.84SSNGKK199 pKa = 9.43CSKK202 pKa = 10.37FLAAKK207 pKa = 8.78PRR209 pKa = 11.84PKK211 pKa = 10.72VLIQSTSASPASVPTANSVPTATDD235 pKa = 3.17AVINEE240 pKa = 4.3VPPTTLNSIPTSTIAGFDD258 pKa = 3.44NVQPTVTPITTVSSPDD274 pKa = 2.99QTQPVAEE281 pKa = 4.21SQEE284 pKa = 3.91VDD286 pKa = 4.0DD287 pKa = 5.34EE288 pKa = 5.12SISADD293 pKa = 3.19NVVLTTSTSTSTVILPATVFVEE315 pKa = 4.55MVTTTQPTTIWATEE329 pKa = 4.23TQTQTQTQTQTQTQTITSTSVQTQWATQTQWATTTLSNCAANDD372 pKa = 3.26EE373 pKa = 4.67EE374 pKa = 5.2INVNSVSQSVQEE386 pKa = 4.24AGYY389 pKa = 8.35TPTPTSTYY397 pKa = 8.27TSSSISSTISSSSSISTSSSTVSQVLPTPSINNSVPTQTSNNTGDD442 pKa = 3.98EE443 pKa = 4.17DD444 pKa = 5.92DD445 pKa = 5.39EE446 pKa = 6.05EE447 pKa = 6.71DD448 pKa = 4.57DD449 pKa = 3.58QFKK452 pKa = 10.59PGGVIKK458 pKa = 10.73LSHH461 pKa = 7.21PPLKK465 pKa = 10.8SQLKK469 pKa = 9.25CSNGEE474 pKa = 3.91EE475 pKa = 4.75FKK477 pKa = 8.72TTMCCRR483 pKa = 11.84VDD485 pKa = 3.71QIEE488 pKa = 4.41LNGEE492 pKa = 4.43CKK494 pKa = 10.0CSKK497 pKa = 10.54GFEE500 pKa = 4.15NVLNLNLCLSICLGNRR516 pKa = 11.84LPSGEE521 pKa = 4.72CSLLDD526 pKa = 4.52LNTNLDD532 pKa = 4.0LGLSDD537 pKa = 4.55ILSPLL542 pKa = 3.49

Molecular weight: 57.04 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1B9I632|A0A1B9I632_9TREE YbgI/family dinuclear metal center protein OS=Kwoniella pini CBS 10737 OX=1296096 GN=I206_03045 PE=3 SV=1
MM1 pKa = 7.82PSLHH5 pKa = 6.17QLCPDD10 pKa = 3.97CGLPRR15 pKa = 11.84ASPPPPLDD23 pKa = 3.27TMFEE27 pKa = 4.18EE28 pKa = 4.77DD29 pKa = 4.18FEE31 pKa = 5.16RR32 pKa = 11.84CFICEE37 pKa = 4.09KK38 pKa = 10.24ACKK41 pKa = 9.98GLYY44 pKa = 9.87CSSEE48 pKa = 3.78CRR50 pKa = 11.84LRR52 pKa = 11.84DD53 pKa = 3.24QGTPSPAIRR62 pKa = 11.84ANRR65 pKa = 11.84GPVKK69 pKa = 9.73ITSQLPAALSPQVRR83 pKa = 11.84ATQNIGRR90 pKa = 11.84SPRR93 pKa = 11.84VQPQNRR99 pKa = 11.84GSSSISSGSSVSSSPLQSPQTNPSEE124 pKa = 4.16ADD126 pKa = 3.22SPKK129 pKa = 10.18RR130 pKa = 11.84DD131 pKa = 3.86NFDD134 pKa = 4.39LPPPAYY140 pKa = 7.12PTKK143 pKa = 10.75CFGILPASVPMKK155 pKa = 10.46IPALTARR162 pKa = 11.84ASPLVAPSQTPGSHH176 pKa = 6.53GSTVYY181 pKa = 10.26PAGASIDD188 pKa = 3.52TLRR191 pKa = 11.84FGRR194 pKa = 11.84KK195 pKa = 7.94PSAVNTVLSPNALIPRR211 pKa = 11.84CACGKK216 pKa = 8.99PANHH220 pKa = 7.31RR221 pKa = 11.84NRR223 pKa = 11.84GSSKK227 pKa = 10.71DD228 pKa = 3.5RR229 pKa = 11.84AEE231 pKa = 4.23LADD234 pKa = 3.68SGFSRR239 pKa = 11.84LSLGPSVISAPHH251 pKa = 5.78AQEE254 pKa = 4.16EE255 pKa = 4.43PNPRR259 pKa = 11.84SVRR262 pKa = 11.84IVSEE266 pKa = 4.0SSLPGRR272 pKa = 11.84PYY274 pKa = 10.88QNGLGTPGRR283 pKa = 11.84TALPLGIPSSPQVTASTSFLSRR305 pKa = 11.84SRR307 pKa = 11.84SDD309 pKa = 4.62PIPSSLMAQRR319 pKa = 11.84KK320 pKa = 8.89AIPAAPAPAPLITNVITPSHH340 pKa = 6.85RR341 pKa = 11.84EE342 pKa = 3.75LSEE345 pKa = 4.21MPLSPIVPALGRR357 pKa = 11.84PSRR360 pKa = 11.84SKK362 pKa = 10.22IALDD366 pKa = 3.32VDD368 pKa = 4.2VNSPRR373 pKa = 11.84RR374 pKa = 11.84GRR376 pKa = 11.84SRR378 pKa = 11.84EE379 pKa = 3.92RR380 pKa = 11.84QEE382 pKa = 3.92HH383 pKa = 6.26HH384 pKa = 6.37VGQMTSNFGGPADD397 pKa = 4.34RR398 pKa = 11.84EE399 pKa = 4.26QAPSRR404 pKa = 11.84SRR406 pKa = 11.84TRR408 pKa = 11.84RR409 pKa = 11.84EE410 pKa = 3.29SRR412 pKa = 11.84RR413 pKa = 11.84RR414 pKa = 11.84SDD416 pKa = 2.83SRR418 pKa = 11.84NKK420 pKa = 9.0EE421 pKa = 3.64RR422 pKa = 11.84SRR424 pKa = 11.84GGSGRR429 pKa = 11.84PSRR432 pKa = 11.84EE433 pKa = 3.39RR434 pKa = 11.84PIEE437 pKa = 4.27EE438 pKa = 4.2IEE440 pKa = 4.12RR441 pKa = 11.84TGQRR445 pKa = 11.84SPIQQQLNSPQILPSWSRR463 pKa = 11.84RR464 pKa = 11.84ASEE467 pKa = 3.73ATADD471 pKa = 3.72RR472 pKa = 11.84RR473 pKa = 11.84RR474 pKa = 11.84VLGEE478 pKa = 3.5AAPAMRR484 pKa = 11.84RR485 pKa = 11.84TASGGKK491 pKa = 9.5KK492 pKa = 10.23SPICEE497 pKa = 3.89RR498 pKa = 11.84GRR500 pKa = 11.84EE501 pKa = 3.85RR502 pKa = 11.84DD503 pKa = 3.28KK504 pKa = 11.55DD505 pKa = 3.37PEE507 pKa = 4.03EE508 pKa = 4.11RR509 pKa = 11.84KK510 pKa = 9.85KK511 pKa = 11.3EE512 pKa = 4.01EE513 pKa = 4.18LDD515 pKa = 3.47RR516 pKa = 11.84TSKK519 pKa = 10.6QLSQVFGVAAVV530 pKa = 3.23

Molecular weight: 57.19 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

7827

0

7827

4033902

49

5028

515.4

57.06

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.009 ± 0.027

0.957 ± 0.01

5.488 ± 0.019

6.519 ± 0.029

3.456 ± 0.016

6.708 ± 0.027

2.195 ± 0.011

5.915 ± 0.023

5.788 ± 0.029

8.868 ± 0.03

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.964 ± 0.009

4.68 ± 0.021

6.232 ± 0.03

3.983 ± 0.02

5.378 ± 0.02

9.676 ± 0.041

5.961 ± 0.019

5.271 ± 0.021

1.323 ± 0.009

2.627 ± 0.014
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski