Sclerotinia nivalis victorivirus 1

Taxonomy: Viruses; Riboviria; Orthornavirae; Duplornaviricota; Chrymotiviricetes; Ghabrivirales; Totiviridae; Victorivirus; unclassified Victorivirus

Average proteome isoelectric point is 6.97

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A192ABA0|A0A192ABA0_9VIRU Coat protein OS=Sclerotinia nivalis victorivirus 1 OX=1859161 PE=4 SV=1
MM1 pKa = 6.39TTVIRR6 pKa = 11.84NSFLASVLASPRR18 pKa = 11.84GGYY21 pKa = 9.18IEE23 pKa = 5.12NDD25 pKa = 2.75NTYY28 pKa = 10.67RR29 pKa = 11.84RR30 pKa = 11.84YY31 pKa = 10.13KK32 pKa = 10.61SNVRR36 pKa = 11.84TSSTIGGNEE45 pKa = 4.15DD46 pKa = 3.19SRR48 pKa = 11.84LVQILYY54 pKa = 10.31EE55 pKa = 4.16VGRR58 pKa = 11.84SKK60 pKa = 11.0NSKK63 pKa = 9.32GRR65 pKa = 11.84ALARR69 pKa = 11.84PGEE72 pKa = 4.51DD73 pKa = 4.0DD74 pKa = 3.94PLIEE78 pKa = 5.42AGYY81 pKa = 7.58PTANALAEE89 pKa = 4.31DD90 pKa = 4.43FVGLSKK96 pKa = 11.09KK97 pKa = 8.47FTNFSATFEE106 pKa = 4.39FSSHH110 pKa = 4.97AAIVEE115 pKa = 3.99RR116 pKa = 11.84LARR119 pKa = 11.84GLAASSIFDD128 pKa = 4.45DD129 pKa = 4.23VDD131 pKa = 4.17SSDD134 pKa = 3.61LRR136 pKa = 11.84AGRR139 pKa = 11.84TLVINALGTYY149 pKa = 9.44DD150 pKa = 4.16GPVNSLTSSVFIPRR164 pKa = 11.84LVNSAITGDD173 pKa = 3.97VFSVLANAAAGEE185 pKa = 4.22GAEE188 pKa = 4.13IATDD192 pKa = 4.16IIEE195 pKa = 4.7LDD197 pKa = 3.3ALTRR201 pKa = 11.84QPIVPEE207 pKa = 4.2VEE209 pKa = 3.75ATALSRR215 pKa = 11.84AIVDD219 pKa = 3.5ALRR222 pKa = 11.84ILGANMIACDD232 pKa = 3.89QGPLFALALTRR243 pKa = 11.84GLHH246 pKa = 5.82KK247 pKa = 10.54VLTVVGHH254 pKa = 5.34TDD256 pKa = 2.95EE257 pKa = 5.08GAVSRR262 pKa = 11.84DD263 pKa = 3.37LLRR266 pKa = 11.84CGSFSVPFGDD276 pKa = 2.61IHH278 pKa = 7.98YY279 pKa = 10.37GLEE282 pKa = 4.29PYY284 pKa = 10.67AGIPALSTNSSYY296 pKa = 11.14GRR298 pKa = 11.84AAYY301 pKa = 10.14VDD303 pKa = 3.91SLALSTAALVAHH315 pKa = 7.18CDD317 pKa = 3.1PGQIYY322 pKa = 10.24DD323 pKa = 4.17GRR325 pKa = 11.84WLPTFFSGSSSTDD338 pKa = 2.77TDD340 pKa = 3.31GRR342 pKa = 11.84PGDD345 pKa = 4.06SLDD348 pKa = 3.64PTDD351 pKa = 5.98AMTLRR356 pKa = 11.84NRR358 pKa = 11.84AQLLSDD364 pKa = 4.16LPKK367 pKa = 10.6FSLSYY372 pKa = 10.61IPALAKK378 pKa = 10.65LFAAEE383 pKa = 4.38GNPAIAIAAFNGASSQLSRR402 pKa = 11.84TTRR405 pKa = 11.84HH406 pKa = 5.84LKK408 pKa = 9.56FASVSPWFWIEE419 pKa = 3.71PTSLIPHH426 pKa = 6.98DD427 pKa = 4.16FVGSVAEE434 pKa = 4.21HH435 pKa = 6.68EE436 pKa = 4.87GFASYY441 pKa = 10.7GGRR444 pKa = 11.84DD445 pKa = 3.52STRR448 pKa = 11.84SRR450 pKa = 11.84HH451 pKa = 4.49AWEE454 pKa = 5.9DD455 pKa = 3.34IQASGVNDD463 pKa = 3.74TAFSAYY469 pKa = 9.58HH470 pKa = 5.77ALFRR474 pKa = 11.84GARR477 pKa = 11.84ACWFFLHH484 pKa = 6.71WLGNPANGLGSISVRR499 pKa = 11.84QLDD502 pKa = 4.15PNAIIHH508 pKa = 6.61PGPCTAHH515 pKa = 4.78QQVRR519 pKa = 11.84DD520 pKa = 3.62RR521 pKa = 11.84VEE523 pKa = 5.12ASLPWTDD530 pKa = 3.99YY531 pKa = 11.03LWTRR535 pKa = 11.84GQSPFPAPGEE545 pKa = 3.88MLNISGTVGFFVKK558 pKa = 10.2HH559 pKa = 4.56YY560 pKa = 9.25TFDD563 pKa = 4.77DD564 pKa = 3.78EE565 pKa = 4.83GLPTVEE571 pKa = 4.98HH572 pKa = 6.43VPASHH577 pKa = 6.75EE578 pKa = 4.13FLDD581 pKa = 4.13TTVTLHH587 pKa = 5.32VGRR590 pKa = 11.84PIGLSIGASNTPASDD605 pKa = 2.87ARR607 pKa = 11.84RR608 pKa = 11.84ARR610 pKa = 11.84TRR612 pKa = 11.84ATRR615 pKa = 11.84EE616 pKa = 3.46LAAASARR623 pKa = 11.84AAVFGRR629 pKa = 11.84PDD631 pKa = 3.39VSEE634 pKa = 4.32MPTLTTAPVLRR645 pKa = 11.84SRR647 pKa = 11.84NPTLPTHH654 pKa = 6.11ITPNDD659 pKa = 3.78TPGGTDD665 pKa = 2.98VTHH668 pKa = 7.51RR669 pKa = 11.84SRR671 pKa = 11.84HH672 pKa = 4.79QGVGGADD679 pKa = 3.05ASDD682 pKa = 3.77RR683 pKa = 11.84LPAGEE688 pKa = 4.26PRR690 pKa = 11.84IPVPQHH696 pKa = 4.65QPVRR700 pKa = 11.84YY701 pKa = 7.85PQVPRR706 pKa = 11.84PAGNQPGGGGPGIPPAPPGPGGPNGDD732 pKa = 5.15DD733 pKa = 5.05DD734 pKa = 6.67DD735 pKa = 5.44NDD737 pKa = 3.58PPAPVNPPEE746 pKa = 4.98GGPPTPPAGAAPPNGPAPII765 pKa = 4.49

Molecular weight: 80.91 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A192ABA0|A0A192ABA0_9VIRU Coat protein OS=Sclerotinia nivalis victorivirus 1 OX=1859161 PE=4 SV=1
MM1 pKa = 7.15SAFVEE6 pKa = 4.35RR7 pKa = 11.84ASAYY11 pKa = 10.24GVVGDD16 pKa = 4.29YY17 pKa = 11.1LLSLRR22 pKa = 11.84SYY24 pKa = 10.91FPDD27 pKa = 3.16SFKK30 pKa = 11.13GYY32 pKa = 10.17GQTTFVNDD40 pKa = 3.72LVRR43 pKa = 11.84LQSSTPTLKK52 pKa = 9.83TKK54 pKa = 10.43HH55 pKa = 6.39ALLPAAVSLLALPFPLQVPLTLSDD79 pKa = 3.39ILVLAKK85 pKa = 10.12RR86 pKa = 11.84ASGVPFDD93 pKa = 4.48YY94 pKa = 10.81VHH96 pKa = 6.46SARR99 pKa = 11.84WSDD102 pKa = 3.61SPLISSEE109 pKa = 3.76YY110 pKa = 9.68RR111 pKa = 11.84GRR113 pKa = 11.84DD114 pKa = 3.53YY115 pKa = 11.03MVLCTNALFLRR126 pKa = 11.84NCFPVKK132 pKa = 9.93KK133 pKa = 9.65HH134 pKa = 5.64ASAYY138 pKa = 9.65SKK140 pKa = 11.42VNVSLPDD147 pKa = 3.74LAVSLCKK154 pKa = 10.32LGHH157 pKa = 5.15TRR159 pKa = 11.84SLIGMIFRR167 pKa = 11.84CAGLLHH173 pKa = 7.17EE174 pKa = 5.06DD175 pKa = 3.36AFMNALIYY183 pKa = 10.36GYY185 pKa = 10.45ALSYY189 pKa = 10.99HH190 pKa = 6.63FGASGWDD197 pKa = 3.52IACHH201 pKa = 6.59FILNPKK207 pKa = 8.26IAKK210 pKa = 9.28NVSVSLKK217 pKa = 10.77ALGANTTRR225 pKa = 11.84EE226 pKa = 3.87GALLVEE232 pKa = 5.02ADD234 pKa = 3.82TLQGRR239 pKa = 11.84LAAPVDD245 pKa = 3.22IDD247 pKa = 3.21AQARR251 pKa = 11.84YY252 pKa = 9.47RR253 pKa = 11.84CDD255 pKa = 3.09PVAVAKK261 pKa = 10.55SVIPYY266 pKa = 9.63SDD268 pKa = 3.81EE269 pKa = 3.79LRR271 pKa = 11.84THH273 pKa = 6.16IRR275 pKa = 11.84AILLDD280 pKa = 3.52EE281 pKa = 4.41TRR283 pKa = 11.84DD284 pKa = 3.91RR285 pKa = 11.84EE286 pKa = 4.41CVLPNLHH293 pKa = 6.38SWWSARR299 pKa = 11.84WLWCVNGSQTTKK311 pKa = 10.36SSKK314 pKa = 11.29DD315 pKa = 3.11MGLDD319 pKa = 3.4PKK321 pKa = 11.11ANRR324 pKa = 11.84ATHH327 pKa = 6.41DD328 pKa = 3.17QDD330 pKa = 3.5FRR332 pKa = 11.84RR333 pKa = 11.84MASEE337 pKa = 3.9ALKK340 pKa = 10.74SEE342 pKa = 4.87PLTTWDD348 pKa = 3.29GTTSVSKK355 pKa = 10.59SIKK358 pKa = 10.22LEE360 pKa = 4.04NGKK363 pKa = 9.26EE364 pKa = 3.79RR365 pKa = 11.84AIFACDD371 pKa = 3.22TNSYY375 pKa = 10.54FAFSWLLSSAEE386 pKa = 4.08KK387 pKa = 9.61VWRR390 pKa = 11.84GKK392 pKa = 10.39RR393 pKa = 11.84VILDD397 pKa = 3.66PGVGGHH403 pKa = 7.04LGIAKK408 pKa = 9.74RR409 pKa = 11.84VQGAQRR415 pKa = 11.84GGGVNLMLDD424 pKa = 3.48YY425 pKa = 11.52DD426 pKa = 4.57DD427 pKa = 6.33FNSQHH432 pKa = 6.18ATPVMQCVIDD442 pKa = 3.92EE443 pKa = 4.39LCNIFSCPDD452 pKa = 3.05WYY454 pKa = 10.95RR455 pKa = 11.84EE456 pKa = 3.89LLINSLDD463 pKa = 3.52KK464 pKa = 11.0MFINIDD470 pKa = 3.45GAPQRR475 pKa = 11.84VVGTLMSGHH484 pKa = 7.12RR485 pKa = 11.84GTTFFNSVLNAAYY498 pKa = 9.5IRR500 pKa = 11.84LAVGASAFDD509 pKa = 3.79SLISLHH515 pKa = 6.98AGDD518 pKa = 5.56DD519 pKa = 3.74VYY521 pKa = 11.1IRR523 pKa = 11.84CNTLSDD529 pKa = 4.29CDD531 pKa = 4.37SILNNTRR538 pKa = 11.84RR539 pKa = 11.84VGCRR543 pKa = 11.84MNPSKK548 pKa = 10.84QSIGFVGAEE557 pKa = 4.07FLRR560 pKa = 11.84VGIGTNAAYY569 pKa = 9.93GYY571 pKa = 9.27LARR574 pKa = 11.84GIAGFVSGNWVTQDD588 pKa = 3.17ILAPDD593 pKa = 4.3DD594 pKa = 4.43ALVSSISACRR604 pKa = 11.84TLINRR609 pKa = 11.84SGCASLALLLSRR621 pKa = 11.84SLRR624 pKa = 11.84YY625 pKa = 8.31TSGFSHH631 pKa = 6.75RR632 pKa = 11.84VLRR635 pKa = 11.84SLFSGEE641 pKa = 4.13SALEE645 pKa = 3.82GSPVYY650 pKa = 10.73NVDD653 pKa = 3.38YY654 pKa = 10.79QIRR657 pKa = 11.84NYY659 pKa = 10.64KK660 pKa = 8.16MNRR663 pKa = 11.84VTPDD667 pKa = 3.88SIPVPSNWARR677 pKa = 11.84HH678 pKa = 4.78ASIDD682 pKa = 3.78YY683 pKa = 7.64LTSHH687 pKa = 7.05LSEE690 pKa = 5.19IEE692 pKa = 3.92VTAINMVGVDD702 pKa = 4.06ALNLLVTSSYY712 pKa = 11.7SKK714 pKa = 10.65GLNMKK719 pKa = 9.46YY720 pKa = 9.67RR721 pKa = 11.84AALTRR726 pKa = 11.84PTISRR731 pKa = 11.84MTVRR735 pKa = 11.84LARR738 pKa = 11.84GFVSAATLLDD748 pKa = 3.17KK749 pKa = 10.83RR750 pKa = 11.84LEE752 pKa = 4.38RR753 pKa = 11.84GCLSQYY759 pKa = 9.98PVVRR763 pKa = 11.84LFEE766 pKa = 4.15NRR768 pKa = 11.84LDD770 pKa = 3.94HH771 pKa = 7.2NSLRR775 pKa = 11.84EE776 pKa = 4.23LITLAGGNPAARR788 pKa = 11.84DD789 pKa = 3.55LRR791 pKa = 11.84EE792 pKa = 3.83EE793 pKa = 4.1AFGRR797 pKa = 11.84TSLSKK802 pKa = 10.99NIIGYY807 pKa = 9.82LPFGDD812 pKa = 3.9AASLSKK818 pKa = 10.19RR819 pKa = 11.84TTAGNIFTLYY829 pKa = 10.56NVYY832 pKa = 8.82TT833 pKa = 3.96

Molecular weight: 91.66 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

1598

765

833

799.0

86.28

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

10.513 ± 0.856

1.439 ± 0.537

5.945 ± 0.225

3.379 ± 0.282

3.942 ± 0.075

8.073 ± 0.916

2.441 ± 0.208

4.819 ± 0.077

2.503 ± 0.818

10.013 ± 1.305

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.252 ± 0.409

4.38 ± 0.314

6.32 ± 1.936

2.003 ± 0.061

7.009 ± 0.145

9.199 ± 0.48

6.07 ± 0.497

6.446 ± 0.296

1.252 ± 0.141

3.004 ± 0.535
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski