Chelatococcus asaccharovorans

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales; Chelatococcaceae; Chelatococcus

Average proteome isoelectric point is 6.77

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 6659 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2V3TT05|A0A2V3TT05_9RHIZ Uncharacterized protein OS=Chelatococcus asaccharovorans OX=28210 GN=C7450_1214 PE=4 SV=1
MM1 pKa = 7.44ATTDD5 pKa = 3.63AASSSLIPAHH15 pKa = 6.81SPFSYY20 pKa = 10.73NVGINYY26 pKa = 7.91EE27 pKa = 4.08SWDD30 pKa = 3.51GGRR33 pKa = 11.84VGRR36 pKa = 11.84VIANDD41 pKa = 3.69LDD43 pKa = 5.89AITQNFKK50 pKa = 11.09LIRR53 pKa = 11.84TYY55 pKa = 11.15HH56 pKa = 6.48DD57 pKa = 3.43AAVGTSDD64 pKa = 3.21PTAPIIEE71 pKa = 4.31PTQQEE76 pKa = 4.46VISYY80 pKa = 9.26VLAHH84 pKa = 6.99PGLEE88 pKa = 3.99LSMGTNNNALANGGYY103 pKa = 8.93GAPWSPGLMVDD114 pKa = 5.25PAYY117 pKa = 9.84TDD119 pKa = 2.85QWVAMIIEE127 pKa = 4.75AFGSTNAVEE136 pKa = 5.02EE137 pKa = 4.08NLKK140 pKa = 10.18MILLGNEE147 pKa = 3.83LDD149 pKa = 4.51ANGPPPGDD157 pKa = 3.51PLFEE161 pKa = 4.26TYY163 pKa = 10.76YY164 pKa = 10.85SVWIPTAFQNLQTSLANAGLGSIPISTTIANYY196 pKa = 8.14GTGNVVSTSISSFIEE211 pKa = 4.55TNWSASWNGGEE222 pKa = 5.26PIVLYY227 pKa = 10.51NQYY230 pKa = 9.2TPDD233 pKa = 3.72NGSSTDD239 pKa = 3.51YY240 pKa = 11.1SSVISYY246 pKa = 10.08FEE248 pKa = 4.12SLATTFDD255 pKa = 3.3GALAPFIGEE264 pKa = 4.27TGFSTLYY271 pKa = 9.71GQPGQVTVYY280 pKa = 10.68SQIFDD285 pKa = 3.76WLNSQWDD292 pKa = 4.01TGHH295 pKa = 5.92KK296 pKa = 8.56TVPLFAFDD304 pKa = 6.11AFDD307 pKa = 5.55QPAAWPDD314 pKa = 3.15VEE316 pKa = 4.85KK317 pKa = 11.17YY318 pKa = 10.45YY319 pKa = 11.14GIYY322 pKa = 9.42TDD324 pKa = 4.48SGSLKK329 pKa = 10.14PGLAAILPSWLTTATSTYY347 pKa = 10.83VEE349 pKa = 4.23GTAAAEE355 pKa = 4.06RR356 pKa = 11.84FFAKK360 pKa = 10.08PGNDD364 pKa = 2.76IVDD367 pKa = 4.18PGLGDD372 pKa = 4.38DD373 pKa = 4.05VLALGGTSARR383 pKa = 11.84YY384 pKa = 9.16SVALSGAVALVTDD397 pKa = 4.8LMTNSTDD404 pKa = 3.36VVSNVQALEE413 pKa = 4.02FADD416 pKa = 3.92GTKK419 pKa = 10.87ALFATDD425 pKa = 3.49QTHH428 pKa = 6.49IAALYY433 pKa = 9.33EE434 pKa = 4.22AMLGRR439 pKa = 11.84DD440 pKa = 3.56ADD442 pKa = 4.07SAGLAFWASQSFSGTTFDD460 pKa = 4.83AMASAFTDD468 pKa = 3.44SAEE471 pKa = 4.01YY472 pKa = 10.15AARR475 pKa = 11.84STLDD479 pKa = 3.28DD480 pKa = 4.09STWLAGLYY488 pKa = 10.62DD489 pKa = 4.13NLLHH493 pKa = 7.14RR494 pKa = 11.84AADD497 pKa = 4.06SEE499 pKa = 4.42GQAYY503 pKa = 8.54WLAQRR508 pKa = 11.84DD509 pKa = 3.77AGVARR514 pKa = 11.84HH515 pKa = 5.97EE516 pKa = 4.31IEE518 pKa = 4.03TTFILSAEE526 pKa = 4.29FTSAAHH532 pKa = 6.71DD533 pKa = 4.42LVDD536 pKa = 3.47STQWMGLVGGTLPDD550 pKa = 3.68LPAAHH555 pKa = 6.81GPSSS559 pKa = 3.26

Molecular weight: 59.35 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2V3UHC2|A0A2V3UHC2_9RHIZ Elongation factor Tu (Fragment) OS=Chelatococcus asaccharovorans OX=28210 GN=C7450_106425 PE=3 SV=1
MM1 pKa = 7.46ARR3 pKa = 11.84SQAVASGVGQPVSAQPASVLVGTAAFGAPLLVLALGHH40 pKa = 6.14MLSNMLRR47 pKa = 11.84TLPAIATDD55 pKa = 3.61VMAVDD60 pKa = 4.12IGVSAEE66 pKa = 3.95ALASLTGAYY75 pKa = 9.71HH76 pKa = 6.33FAFAAGQIPVGVALDD91 pKa = 3.83RR92 pKa = 11.84YY93 pKa = 9.13GVRR96 pKa = 11.84TVSLTLFAIVTVGAALAAVVGGAAGFFLAQIVLGVGCCGMLLCPMTLAAKK146 pKa = 10.39LLTPAKK152 pKa = 9.78FGLWSGLIQGVGNSGMLLSASPLAWLIEE180 pKa = 4.13MAGWRR185 pKa = 11.84AGYY188 pKa = 9.71GVAAIAGVVIAGLVFLLVPNTPPEE212 pKa = 4.39RR213 pKa = 11.84GAGHH217 pKa = 5.92ATLRR221 pKa = 11.84SEE223 pKa = 3.97ARR225 pKa = 11.84EE226 pKa = 3.9VVQIGLSARR235 pKa = 11.84MRR237 pKa = 11.84GIIILALVSFAVMIGIRR254 pKa = 11.84GLWGGPWLMDD264 pKa = 3.16VKK266 pKa = 10.9GLSRR270 pKa = 11.84VEE272 pKa = 3.96AGAVLMPLTIALVLGPIAFGMLDD295 pKa = 3.02RR296 pKa = 11.84RR297 pKa = 11.84IGHH300 pKa = 6.21RR301 pKa = 11.84RR302 pKa = 11.84ALIIAGHH309 pKa = 5.99AVAGAMLLLLAMGGPAGTLSRR330 pKa = 11.84LLGEE334 pKa = 4.15MSLPVTFDD342 pKa = 3.13TTVLFIFGATIAVQPLLFAMGRR364 pKa = 11.84SIFTPDD370 pKa = 3.11KK371 pKa = 10.77AGKK374 pKa = 9.72ALAAINFAFFAGAAIFQPVTGAVSAVWGTAGVIVFLGLLMLTCTLAFALMTEE426 pKa = 4.39RR427 pKa = 11.84RR428 pKa = 11.84ATGGRR433 pKa = 3.5

Molecular weight: 44.08 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6659

0

6659

2107697

28

2242

316.5

34.18

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

13.115 ± 0.042

0.807 ± 0.009

5.553 ± 0.024

5.25 ± 0.026

3.739 ± 0.02

8.672 ± 0.027

2.024 ± 0.014

5.347 ± 0.019

2.893 ± 0.024

10.327 ± 0.036

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.407 ± 0.012

2.407 ± 0.018

5.435 ± 0.023

2.911 ± 0.015

7.366 ± 0.031

5.344 ± 0.019

5.294 ± 0.017

7.652 ± 0.024

1.293 ± 0.011

2.163 ± 0.014
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski