Torque teno Tadarida brasiliensis virus

Taxonomy: Viruses; Anelloviridae; Xitorquevirus; Torque teno chiroptera virus 1

Average proteome isoelectric point is 7.44

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A088MWS2|A0A088MWS2_9VIRU Capsid protein OS=Torque teno Tadarida brasiliensis virus OX=1543419 PE=3 SV=1
MM1 pKa = 7.88GDD3 pKa = 3.51FPVPPKK9 pKa = 10.84GLAHH13 pKa = 5.84YY14 pKa = 8.38WSSKK18 pKa = 8.51LWASGTLAAHH28 pKa = 6.99NSFCTCADD36 pKa = 3.7PAGHH40 pKa = 7.39LGAALSGTLAEE51 pKa = 4.93FFKK54 pKa = 10.81EE55 pKa = 4.11KK56 pKa = 10.58CQSTKK61 pKa = 10.98DD62 pKa = 3.56GASPEE67 pKa = 4.23GLLTTGDD74 pKa = 3.69EE75 pKa = 4.53DD76 pKa = 4.96GSGEE80 pKa = 4.16GALDD84 pKa = 3.65LLIEE88 pKa = 4.34AFEE91 pKa = 4.98GDD93 pKa = 3.38TAGDD97 pKa = 3.59TKK99 pKa = 11.36

Molecular weight: 10.15 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A088MK20|A0A088MK20_9VIRU ORF2 OS=Torque teno Tadarida brasiliensis virus OX=1543419 PE=4 SV=1
MM1 pKa = 7.07QQTQPLIQFQNHH13 pKa = 5.27IQTACNTPPEE23 pKa = 4.43PVQSYY28 pKa = 10.25SRR30 pKa = 11.84YY31 pKa = 9.67KK32 pKa = 10.74SMTRR36 pKa = 11.84VRR38 pKa = 11.84WANQSSTHH46 pKa = 5.07GTSGEE51 pKa = 3.87ASSPKK56 pKa = 10.35GLSKK60 pKa = 10.69EE61 pKa = 3.99LLEE64 pKa = 4.55EE65 pKa = 4.21LTDD68 pKa = 5.45LLLQQHH74 pKa = 6.04TDD76 pKa = 3.3QLEE79 pKa = 4.19KK80 pKa = 10.89KK81 pKa = 9.56QGKK84 pKa = 9.22SSQKK88 pKa = 10.05KK89 pKa = 8.68KK90 pKa = 10.19HH91 pKa = 5.17PQKK94 pKa = 10.36KK95 pKa = 8.76QRR97 pKa = 11.84AHH99 pKa = 4.02QTRR102 pKa = 11.84KK103 pKa = 9.29RR104 pKa = 11.84RR105 pKa = 11.84RR106 pKa = 11.84SVAAQKK112 pKa = 10.63EE113 pKa = 4.67EE114 pKa = 4.26NSSSTNWSEE123 pKa = 4.72SSASDD128 pKa = 2.9WDD130 pKa = 3.87FF131 pKa = 4.08

Molecular weight: 15.05 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3

0

3

777

99

547

259.0

29.77

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.692 ± 1.343

0.901 ± 0.483

5.148 ± 0.678

5.277 ± 0.848

3.218 ± 0.5

6.564 ± 1.538

3.346 ± 0.135

4.376 ± 1.548

6.306 ± 1.194

8.237 ± 0.585

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.544 ± 0.13

3.346 ± 0.489

5.792 ± 0.526

6.049 ± 1.981

7.465 ± 2.058

8.108 ± 2.161

7.593 ± 0.124

2.831 ± 0.553

3.604 ± 0.72

3.604 ± 1.157
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski