Malvastrum yellow vein Baoshan virus

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus; Malvastrum yellow vein virus

Average proteome isoelectric point is 7.67

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 6 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|D5H3R7|D5H3R7_9GEMI AC4 protein OS=Malvastrum yellow vein Baoshan virus OX=642493 GN=AC4 PE=3 SV=1
MM1 pKa = 7.33PQPKK5 pKa = 9.9KK6 pKa = 10.8FLINAKK12 pKa = 10.13NYY14 pKa = 8.98FLTYY18 pKa = 7.3PHH20 pKa = 6.93CSISKK25 pKa = 10.47EE26 pKa = 4.02EE27 pKa = 4.25TLSQLQNLNTPTNKK41 pKa = 10.08KK42 pKa = 9.46YY43 pKa = 10.83IKK45 pKa = 9.66ICRR48 pKa = 11.84EE49 pKa = 3.67LHH51 pKa = 6.34EE52 pKa = 5.83DD53 pKa = 4.08GEE55 pKa = 4.49PHH57 pKa = 5.71IHH59 pKa = 6.55VLIQFEE65 pKa = 5.16GKK67 pKa = 10.07FKK69 pKa = 10.55CQNNRR74 pKa = 11.84FFDD77 pKa = 4.02LVSPTRR83 pKa = 11.84SVHH86 pKa = 5.0FHH88 pKa = 6.81PNIQGAKK95 pKa = 9.25SSSDD99 pKa = 3.11VKK101 pKa = 11.24SYY103 pKa = 10.79IDD105 pKa = 3.7KK106 pKa = 11.33DD107 pKa = 3.49GDD109 pKa = 3.67TLEE112 pKa = 4.14WGEE115 pKa = 3.84FQIDD119 pKa = 3.21GRR121 pKa = 11.84SARR124 pKa = 11.84GGQQSANDD132 pKa = 4.09AYY134 pKa = 10.74AQALNSGSKK143 pKa = 10.2SEE145 pKa = 4.03ALNVIRR151 pKa = 11.84EE152 pKa = 4.21LAPKK156 pKa = 10.52DD157 pKa = 3.64FVLQFHH163 pKa = 6.7NLNANLDD170 pKa = 4.3RR171 pKa = 11.84IFTPPLEE178 pKa = 4.45VYY180 pKa = 10.31ISPFSSSSFDD190 pKa = 3.44QVPDD194 pKa = 3.66EE195 pKa = 4.36LEE197 pKa = 3.61EE198 pKa = 4.11WACEE202 pKa = 4.06NVVDD206 pKa = 5.15AAARR210 pKa = 11.84PLRR213 pKa = 11.84PQSIVIEE220 pKa = 4.44GDD222 pKa = 3.12SRR224 pKa = 11.84TGKK227 pKa = 8.52TMWARR232 pKa = 11.84SLGPHH237 pKa = 6.71NYY239 pKa = 10.18LCGHH243 pKa = 7.38LDD245 pKa = 4.18LSPKK249 pKa = 10.15VYY251 pKa = 11.07SNDD254 pKa = 2.25AWYY257 pKa = 10.92NVIDD261 pKa = 4.79DD262 pKa = 4.33VDD264 pKa = 3.73PHH266 pKa = 6.08FLKK269 pKa = 10.67HH270 pKa = 5.9FKK272 pKa = 10.69EE273 pKa = 4.43FMGAQRR279 pKa = 11.84DD280 pKa = 3.81WQSNTKK286 pKa = 9.6YY287 pKa = 10.57GKK289 pKa = 9.12PVQIKK294 pKa = 10.41GGIPTIFLCNPGPNSSYY311 pKa = 11.34KK312 pKa = 10.62EE313 pKa = 3.85FLDD316 pKa = 3.97EE317 pKa = 4.83EE318 pKa = 4.8KK319 pKa = 10.25NTALKK324 pKa = 10.55NWALKK329 pKa = 10.24NAIFVTLEE337 pKa = 3.93GPLYY341 pKa = 10.74SGSNQSTAQGSEE353 pKa = 3.84EE354 pKa = 4.11TQQEE358 pKa = 4.32EE359 pKa = 4.54EE360 pKa = 4.33SRR362 pKa = 11.84SS363 pKa = 3.6

Molecular weight: 41.07 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|D5H3R4|D5H3R4_9GEMI Replication enhancer OS=Malvastrum yellow vein Baoshan virus OX=642493 GN=AC3 PE=3 SV=1
MM1 pKa = 7.71SKK3 pKa = 10.35RR4 pKa = 11.84PADD7 pKa = 3.52IVISTPASKK16 pKa = 10.29VRR18 pKa = 11.84RR19 pKa = 11.84RR20 pKa = 11.84LNFDD24 pKa = 3.18TPYY27 pKa = 7.99STRR30 pKa = 11.84VAVPTVRR37 pKa = 11.84VTKK40 pKa = 10.7SRR42 pKa = 11.84MWANRR47 pKa = 11.84PTNRR51 pKa = 11.84KK52 pKa = 7.45PRR54 pKa = 11.84MYY56 pKa = 10.75RR57 pKa = 11.84MYY59 pKa = 10.44RR60 pKa = 11.84SPDD63 pKa = 3.21VPRR66 pKa = 11.84GCEE69 pKa = 4.34GPCKK73 pKa = 10.01VQSFEE78 pKa = 4.02SRR80 pKa = 11.84HH81 pKa = 5.54DD82 pKa = 3.51VVHH85 pKa = 6.75IGKK88 pKa = 9.41VMCISDD94 pKa = 3.67VTRR97 pKa = 11.84GTGLTHH103 pKa = 7.09RR104 pKa = 11.84VGKK107 pKa = 9.66RR108 pKa = 11.84FCVKK112 pKa = 9.94SVYY115 pKa = 10.52VLGKK119 pKa = 9.41IWMDD123 pKa = 3.39EE124 pKa = 4.08NIKK127 pKa = 10.76SKK129 pKa = 10.6NHH131 pKa = 5.54TNNVMFFLVRR141 pKa = 11.84DD142 pKa = 3.88RR143 pKa = 11.84RR144 pKa = 11.84PTGTPQDD151 pKa = 3.8FGDD154 pKa = 3.96VFNMFDD160 pKa = 4.34NEE162 pKa = 4.11PSTATVKK169 pKa = 10.38NVHH172 pKa = 6.5RR173 pKa = 11.84DD174 pKa = 3.15RR175 pKa = 11.84YY176 pKa = 8.77QVLRR180 pKa = 11.84KK181 pKa = 9.41WYY183 pKa = 8.08ATVTGGQYY191 pKa = 9.96GAKK194 pKa = 9.62EE195 pKa = 3.57QALVKK200 pKa = 10.72KK201 pKa = 9.81FVKK204 pKa = 9.9VNNYY208 pKa = 7.85VVYY211 pKa = 10.11NQQEE215 pKa = 3.8AGKK218 pKa = 10.08YY219 pKa = 8.01EE220 pKa = 4.07NHH222 pKa = 6.29SEE224 pKa = 4.11NALMLYY230 pKa = 7.58MACTHH235 pKa = 7.06ASNPVYY241 pKa = 9.86ATLKK245 pKa = 9.47IRR247 pKa = 11.84IYY249 pKa = 10.64FYY251 pKa = 11.34DD252 pKa = 3.32SVTNN256 pKa = 3.98

Molecular weight: 29.61 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6

0

6

1114

96

363

185.7

21.21

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.399 ± 0.618

2.244 ± 0.508

4.668 ± 0.6

5.117 ± 0.952

4.309 ± 0.356

5.117 ± 0.324

3.591 ± 0.555

5.117 ± 1.152

5.745 ± 0.702

7.092 ± 1.006

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.154 ± 0.617

6.463 ± 0.29

6.194 ± 0.414

4.578 ± 0.618

6.373 ± 1.103

9.425 ± 1.606

5.925 ± 1.602

6.194 ± 1.455

1.526 ± 0.242

3.77 ± 0.618
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski