Daeseongdong virus 2

Taxonomy: Viruses; unclassified viruses

Average proteome isoelectric point is 7.57

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    

Protein with the lowest isoelectric point:
>tr|A0A0S2RRD5|A0A0S2RRD5_9VIRU Putative capsid protein OS=Daeseongdong virus 2 OX=1758882 PE=4 SV=1
MM1 pKa = 7.54DD2 pKa = 4.06TSNPVMSSDD11 pKa = 2.98RR12 pKa = 11.84TTVEE16 pKa = 4.19EE17 pKa = 3.87ILEE20 pKa = 4.09RR21 pKa = 11.84SAGVKK26 pKa = 10.21RR27 pKa = 11.84QDD29 pKa = 3.23LSFLGEE35 pKa = 3.9VARR38 pKa = 11.84TAKK41 pKa = 10.29RR42 pKa = 11.84EE43 pKa = 4.01HH44 pKa = 6.72LSCEE48 pKa = 3.86IVFPPLEE55 pKa = 3.85VRR57 pKa = 11.84QIVSEE62 pKa = 4.22FKK64 pKa = 10.56KK65 pKa = 10.57SIPRR69 pKa = 11.84VEE71 pKa = 4.21SEE73 pKa = 4.28RR74 pKa = 11.84SGEE77 pKa = 3.79LDD79 pKa = 3.38SEE81 pKa = 4.56VFEE84 pKa = 4.44VAMEE88 pKa = 4.0KK89 pKa = 9.98MPVCGLMDD97 pKa = 3.53EE98 pKa = 4.47QGIPLHH104 pKa = 6.31PAGKK108 pKa = 8.6NQTGGHH114 pKa = 4.71VKK116 pKa = 10.11VNRR119 pKa = 11.84VFGKK123 pKa = 10.19SAGVPLGLADD133 pKa = 3.24IVEE136 pKa = 4.41VFGPEE141 pKa = 3.62VLQRR145 pKa = 11.84KK146 pKa = 7.07MVYY149 pKa = 9.68TSGTWQGFKK158 pKa = 10.9ARR160 pKa = 11.84LKK162 pKa = 9.76QQMSRR167 pKa = 11.84KK168 pKa = 7.35TVPLYY173 pKa = 9.99KK174 pKa = 10.28TMSEE178 pKa = 3.9ARR180 pKa = 11.84GAAKK184 pKa = 9.86MGLNPALDD192 pKa = 4.56QLDD195 pKa = 3.19QWMPRR200 pKa = 11.84GPNPNWPGVKK210 pKa = 9.17TDD212 pKa = 3.79IVDD215 pKa = 3.55ALMGGIKK222 pKa = 8.7VTANSSAGAPYY233 pKa = 9.03WRR235 pKa = 11.84NKK237 pKa = 8.61GEE239 pKa = 4.25CMEE242 pKa = 4.52QILNVGLPIFVKK254 pKa = 10.33AVKK257 pKa = 9.81EE258 pKa = 4.03NKK260 pKa = 10.08LDD262 pKa = 4.05DD263 pKa = 3.96LWRR266 pKa = 11.84KK267 pKa = 9.19NPEE270 pKa = 3.76FFLCEE275 pKa = 4.22VKK277 pKa = 10.97NKK279 pKa = 7.45TDD281 pKa = 3.29RR282 pKa = 11.84YY283 pKa = 9.45KK284 pKa = 11.05VSEE287 pKa = 4.43LTSKK291 pKa = 8.47TRR293 pKa = 11.84PYY295 pKa = 10.91VSVPAHH301 pKa = 5.85IAFLVSMLSQGFQEE315 pKa = 4.27TLKK318 pKa = 10.98VFTDD322 pKa = 4.44DD323 pKa = 3.62VTSSNAYY330 pKa = 9.91GFSSTNGGLSKK341 pKa = 10.11MVAWMRR347 pKa = 11.84GADD350 pKa = 3.27KK351 pKa = 10.68RR352 pKa = 11.84GRR354 pKa = 11.84VCCYY358 pKa = 10.74GDD360 pKa = 3.59DD361 pKa = 3.67ARR363 pKa = 11.84IAVLRR368 pKa = 11.84EE369 pKa = 3.65GKK371 pKa = 9.89VWVVDD376 pKa = 3.8PDD378 pKa = 4.3FKK380 pKa = 11.66QMDD383 pKa = 3.79GSIDD387 pKa = 3.57GKK389 pKa = 10.59DD390 pKa = 3.06IEE392 pKa = 5.15LTIEE396 pKa = 4.06WILRR400 pKa = 11.84HH401 pKa = 5.51LRR403 pKa = 11.84KK404 pKa = 10.08DD405 pKa = 3.28QGVSEE410 pKa = 5.09TPAFWDD416 pKa = 5.34GIAKK420 pKa = 8.87VWKK423 pKa = 10.48RR424 pKa = 11.84MATDD428 pKa = 2.79PHH430 pKa = 6.61FVVDD434 pKa = 4.06GTQVYY439 pKa = 9.87RR440 pKa = 11.84KK441 pKa = 9.4RR442 pKa = 11.84SRR444 pKa = 11.84HH445 pKa = 4.57GLMTGIPGTTLFDD458 pKa = 3.67TVKK461 pKa = 10.8SVGVWNTYY469 pKa = 10.73LDD471 pKa = 3.87LASINGWNPLDD482 pKa = 4.05EE483 pKa = 5.79DD484 pKa = 4.07RR485 pKa = 11.84ATDD488 pKa = 4.14FMAKK492 pKa = 9.6NGLVIKK498 pKa = 10.36PGTWNPAVLPEE509 pKa = 5.68DD510 pKa = 4.63KK511 pKa = 10.63DD512 pKa = 3.75QQLLTDD518 pKa = 4.08HH519 pKa = 7.09KK520 pKa = 11.16FLGTQIRR527 pKa = 11.84CVDD530 pKa = 3.45WEE532 pKa = 4.03GHH534 pKa = 5.79MIHH537 pKa = 6.53VPTIPEE543 pKa = 3.8SDD545 pKa = 3.73ALEE548 pKa = 3.97MLVTQKK554 pKa = 11.09DD555 pKa = 3.74DD556 pKa = 3.8PFTKK560 pKa = 10.52VSDD563 pKa = 3.77TTQKK567 pKa = 8.69RR568 pKa = 11.84TLYY571 pKa = 10.19EE572 pKa = 3.99RR573 pKa = 11.84MRR575 pKa = 11.84GLYY578 pKa = 8.38ITFGFEE584 pKa = 3.7NDD586 pKa = 3.39RR587 pKa = 11.84VASAIHH593 pKa = 5.7NVVNKK598 pKa = 10.19LPAEE602 pKa = 4.63IILMQTQIANGEE614 pKa = 4.17RR615 pKa = 11.84PEE617 pKa = 5.33HH618 pKa = 6.2ITLQDD623 pKa = 3.2FNYY626 pKa = 8.93PDD628 pKa = 3.44SSGFPTRR635 pKa = 11.84EE636 pKa = 3.61FCYY639 pKa = 10.51SLYY642 pKa = 10.92SGLKK646 pKa = 7.91SEE648 pKa = 4.47RR649 pKa = 11.84YY650 pKa = 8.97GWIQIFPDD658 pKa = 4.34LEE660 pKa = 4.2GLLADD665 pKa = 4.79LKK667 pKa = 10.71SEE669 pKa = 3.87RR670 pKa = 11.84RR671 pKa = 11.84QLGRR675 pKa = 11.84KK676 pKa = 8.72LRR678 pKa = 11.84LALAEE683 pKa = 4.41RR684 pKa = 11.84SDD686 pKa = 3.49KK687 pKa = 10.89TRR689 pKa = 11.84DD690 pKa = 3.34VLYY693 pKa = 8.29TTEE696 pKa = 4.74GEE698 pKa = 4.34SPPWDD703 pKa = 3.63DD704 pKa = 3.43VLEE707 pKa = 4.23VAEE710 pKa = 4.17ARR712 pKa = 11.84EE713 pKa = 4.21VPKK716 pKa = 10.29MPVYY720 pKa = 9.47STPNVRR726 pKa = 11.84SEE728 pKa = 3.78IARR731 pKa = 11.84VVTSSNTIPAKK742 pKa = 10.22RR743 pKa = 11.84LPTRR747 pKa = 11.84SEE749 pKa = 4.25VVHH752 pKa = 6.22NALTAVGGISTVGDD766 pKa = 4.01LKK768 pKa = 10.77RR769 pKa = 11.84AAGVHH774 pKa = 4.81TASLVEE780 pKa = 4.04AAQSHH785 pKa = 6.58GIFLAGTQDD794 pKa = 3.37QDD796 pKa = 3.64LCSLYY801 pKa = 10.25PIATPTPTLQEE812 pKa = 4.01SLIQNWQKK820 pKa = 11.63SNDD823 pKa = 4.07KK824 pKa = 10.38IDD826 pKa = 3.91GGSSHH831 pKa = 6.74RR832 pKa = 11.84RR833 pKa = 11.84QALIALAQDD842 pKa = 3.28RR843 pKa = 11.84TIRR846 pKa = 11.84TAPEE850 pKa = 3.61KK851 pKa = 10.93VYY853 pKa = 10.58LANDD857 pKa = 3.47VLVAIPDD864 pKa = 3.75LLEE867 pKa = 4.55PKK869 pKa = 10.41DD870 pKa = 3.53PDD872 pKa = 3.86MIVAALNAPLTRR884 pKa = 11.84LYY886 pKa = 11.17GGMKK890 pKa = 9.62WEE892 pKa = 4.09VHH894 pKa = 5.81PPQPKK899 pKa = 9.48EE900 pKa = 3.56INPIKK905 pKa = 8.96VTLYY909 pKa = 9.99VGAKK913 pKa = 9.07EE914 pKa = 3.84RR915 pKa = 11.84LEE917 pKa = 4.13RR918 pKa = 11.84VAEE921 pKa = 4.04ARR923 pKa = 11.84SASIKK928 pKa = 9.9LAKK931 pKa = 10.21AYY933 pKa = 9.33IARR936 pKa = 11.84LIFEE940 pKa = 5.33LNGFTLEE947 pKa = 4.13EE948 pKa = 4.02TRR950 pKa = 11.84MTTTVKK956 pKa = 8.93PTKK959 pKa = 9.55NPKK962 pKa = 8.85VISWADD968 pKa = 3.32EE969 pKa = 4.21VEE971 pKa = 4.21EE972 pKa = 4.3VEE974 pKa = 4.57ALKK977 pKa = 10.91GPYY980 pKa = 9.11AAPPVEE986 pKa = 4.72PIVFEE991 pKa = 4.04QVPHH995 pKa = 6.74LEE997 pKa = 3.9AWKK1000 pKa = 10.22IEE1002 pKa = 4.17YY1003 pKa = 10.69NLVPDD1008 pKa = 4.21RR1009 pKa = 11.84LFPILWRR1016 pKa = 11.84YY1017 pKa = 9.31AVTSEE1022 pKa = 4.3EE1023 pKa = 3.83PTEE1026 pKa = 4.12AVFARR1031 pKa = 11.84LLSKK1035 pKa = 10.56KK1036 pKa = 9.02QEE1038 pKa = 4.1EE1039 pKa = 4.24EE1040 pKa = 4.24ANAQSGSGGPIYY1052 pKa = 10.08RR1053 pKa = 11.84DD1054 pKa = 3.29PPEE1057 pKa = 4.27DD1058 pKa = 3.3QRR1060 pKa = 11.84SRR1062 pKa = 11.84RR1063 pKa = 11.84SRR1065 pKa = 11.84LSVNQRR1071 pKa = 11.84QRR1073 pKa = 11.84QNRR1076 pKa = 11.84ALNRR1080 pKa = 11.84RR1081 pKa = 11.84RR1082 pKa = 11.84RR1083 pKa = 11.84GPPRR1087 pKa = 11.84TDD1089 pKa = 2.89PP1090 pKa = 3.84

Molecular weight:
122.24 kDa
Isoelectric point according different methods:






Protein with the highest isoelectric point:
>tr|A0A0S2RRD5|A0A0S2RRD5_9VIRU Putative capsid protein OS=Daeseongdong virus 2 OX=1758882 PE=4 SV=1
MM1 pKa = 8.02PSRR4 pKa = 11.84KK5 pKa = 9.65KK6 pKa = 10.42NVNSCVCPHH15 pKa = 7.27DD16 pKa = 4.49GKK18 pKa = 10.83QFSTRR23 pKa = 11.84AALQQHH29 pKa = 6.32KK30 pKa = 10.41KK31 pKa = 8.74MVHH34 pKa = 6.22ASPNEE39 pKa = 3.99TRR41 pKa = 11.84PAPQPRR47 pKa = 11.84RR48 pKa = 11.84RR49 pKa = 11.84PRR51 pKa = 11.84RR52 pKa = 11.84RR53 pKa = 11.84SGNGGGLSSDD63 pKa = 4.29LAPSRR68 pKa = 11.84VPTVRR73 pKa = 11.84NSAITTSGSDD83 pKa = 2.98KK84 pKa = 11.11VLVFTIKK91 pKa = 10.46AQQSLIKK98 pKa = 10.05SIPIHH103 pKa = 6.5PGSIPRR109 pKa = 11.84LSNLAKK115 pKa = 10.08SFQRR119 pKa = 11.84ITWRR123 pKa = 11.84SLAVHH128 pKa = 6.39VSPQVSTSINGGYY141 pKa = 9.18VAGIVTDD148 pKa = 4.45PDD150 pKa = 4.11DD151 pKa = 3.88EE152 pKa = 6.36HH153 pKa = 6.68ITASDD158 pKa = 3.82LSSTAGSQTKK168 pKa = 9.34KK169 pKa = 9.08WYY171 pKa = 8.97QDD173 pKa = 3.41AIIRR177 pKa = 11.84MPLKK181 pKa = 9.7TDD183 pKa = 3.13KK184 pKa = 10.89LYY186 pKa = 10.81TSAGEE191 pKa = 4.13EE192 pKa = 4.16PRR194 pKa = 11.84FSSPGTFWICSEE206 pKa = 4.49GNPSSDD212 pKa = 2.93LTVVVTFRR220 pKa = 11.84WTVHH224 pKa = 6.2LEE226 pKa = 3.95GSTLEE231 pKa = 4.76DD232 pKa = 3.96DD233 pKa = 3.85ATSSFVLSGSLNSIGGKK250 pKa = 10.08SIMGYY255 pKa = 8.97KK256 pKa = 10.15ACGSTTVEE264 pKa = 4.11EE265 pKa = 4.67DD266 pKa = 3.39VSGLIPAPIRR276 pKa = 11.84EE277 pKa = 4.28VPGTHH282 pKa = 6.8FFRR285 pKa = 11.84VPTYY289 pKa = 8.47TVEE292 pKa = 4.08YY293 pKa = 9.96QEE295 pKa = 5.06GVGDD299 pKa = 3.53TGTIQMHH306 pKa = 5.01FVAYY310 pKa = 8.57KK311 pKa = 8.99TDD313 pKa = 3.04TKK315 pKa = 11.03NFHH318 pKa = 6.45FSEE321 pKa = 5.22DD322 pKa = 3.6GSSVNASDD330 pKa = 3.32WQADD334 pKa = 3.02VDD336 pKa = 4.1NQVLCSDD343 pKa = 4.03GTYY346 pKa = 10.54FKK348 pKa = 10.88YY349 pKa = 9.33TGQGNACKK357 pKa = 10.09VASTVAPRR365 pKa = 11.84SSPSHH370 pKa = 6.64LKK372 pKa = 9.24RR373 pKa = 11.84HH374 pKa = 5.11SRR376 pKa = 11.84EE377 pKa = 3.72KK378 pKa = 11.07LMSLSRR384 pKa = 11.84KK385 pKa = 8.55VASLEE390 pKa = 3.75ASLKK394 pKa = 9.08KK395 pKa = 10.59FEE397 pKa = 4.76MFSQRR402 pKa = 11.84DD403 pKa = 3.69SMTSSPEE410 pKa = 4.27LIPSPEE416 pKa = 3.86NLEE419 pKa = 4.15LL420 pKa = 5.29

Molecular weight:
45.79 kDa
Isoelectric point according different methods:






Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

1510

420

1090

755.0

84.01

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.887 ± 0.445

0.993 ± 0.207

5.629 ± 0.299

6.424 ± 0.904

3.179 ± 0.187

6.623 ± 0.134

1.987 ± 0.414

4.702 ± 0.085

6.093 ± 0.18

7.881 ± 0.804

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.318 ± 0.197

3.51 ± 0.084

6.49 ± 0.029

3.841 ± 0.015

6.623 ± 0.432

8.212 ± 2.663

6.689 ± 0.556

7.881 ± 0.351

1.722 ± 0.253

2.318 ± 0.083

Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski