Achromobacter phage vB_AxyP_19-32_Axy11

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Schitoviridae; Rothmandenesvirinae; Pourcelvirus; Achromobacter virus Axy11

Average proteome isoelectric point is 6.59

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 81 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A514CUD2|A0A514CUD2_9CAUD Uncharacterized protein OS=Achromobacter phage vB_AxyP_19-32_Axy11 OX=2591042 GN=Axy11_007 PE=4 SV=1
MM1 pKa = 7.2YY2 pKa = 10.48SWLDD6 pKa = 3.62KK7 pKa = 10.76IIEE10 pKa = 4.12EE11 pKa = 3.93QAAYY15 pKa = 11.03YY16 pKa = 11.16GMTPEE21 pKa = 4.12KK22 pKa = 10.22WEE24 pKa = 3.99QLKK27 pKa = 10.01EE28 pKa = 3.61AAIQYY33 pKa = 9.58EE34 pKa = 4.39EE35 pKa = 4.56EE36 pKa = 4.23NPHH39 pKa = 5.02VV40 pKa = 3.79

Molecular weight: 4.86 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A514CUA3|A0A514CUA3_9CAUD Uncharacterized protein OS=Achromobacter phage vB_AxyP_19-32_Axy11 OX=2591042 GN=Axy11_079 PE=4 SV=1
MM1 pKa = 6.12VHH3 pKa = 6.67RR4 pKa = 11.84RR5 pKa = 11.84VKK7 pKa = 10.46KK8 pKa = 10.06KK9 pKa = 10.22IPIPVEE15 pKa = 4.46PIPEE19 pKa = 3.77WRR21 pKa = 11.84KK22 pKa = 9.76KK23 pKa = 10.06LKK25 pKa = 10.66SYY27 pKa = 7.92TAQIGSVGAVLYY39 pKa = 10.55GVFEE43 pKa = 4.23VLQQGLFAVPRR54 pKa = 11.84HH55 pKa = 5.66LLEE58 pKa = 4.72KK59 pKa = 10.12IPYY62 pKa = 8.05GSKK65 pKa = 9.65IALSIWASVMLVKK78 pKa = 10.71LFRR81 pKa = 11.84LKK83 pKa = 10.62RR84 pKa = 11.84KK85 pKa = 9.31EE86 pKa = 3.85KK87 pKa = 10.69

Molecular weight: 10.04 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

81

0

81

22662

40

3437

279.8

31.16

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.289 ± 0.701

0.728 ± 0.134

5.829 ± 0.125

6.456 ± 0.243

3.548 ± 0.165

7.025 ± 0.221

1.972 ± 0.205

5.366 ± 0.307

6.165 ± 0.242

8.23 ± 0.282

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.292 ± 0.119

4.911 ± 0.209

4.598 ± 0.217

4.713 ± 0.232

4.911 ± 0.194

5.591 ± 0.185

5.759 ± 0.229

6.862 ± 0.234

1.461 ± 0.195

3.296 ± 0.238
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski