Urechidicola croceus

Taxonomy: cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Urechidicola

Average proteome isoelectric point is 6.6

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2946 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    

Protein with the lowest isoelectric point:
>tr|A0A1D8P9D9|A0A1D8P9D9_9FLAO Acyl-CoA thioesterase OS=Urechidicola croceus OX=1850246 GN=LPB138_11090 PE=3 SV=1
MM1 pKa = 6.91VFSVGFSQTVIYY13 pKa = 10.95SEE15 pKa = 4.92DD16 pKa = 3.57FEE18 pKa = 6.27SNIGTWTQDD27 pKa = 3.09TADD30 pKa = 3.74TLDD33 pKa = 2.92WSRR36 pKa = 11.84NSGGTGSGGTGPNNSSDD53 pKa = 3.12GSFYY57 pKa = 10.3MYY59 pKa = 10.59TEE61 pKa = 4.29ASSNYY66 pKa = 7.75NTTANFISEE75 pKa = 4.41PFNLSGISSPIFTFHH90 pKa = 5.98YY91 pKa = 10.82HH92 pKa = 5.16MFGSNMGTLNVNISTDD108 pKa = 3.24GGSTFGAPIWTQNGQHH124 pKa = 5.86QGSNSAAWQQVDD136 pKa = 3.81IDD138 pKa = 4.0LSTYY142 pKa = 10.17IGQTINIQFNGQVGSSYY159 pKa = 10.81RR160 pKa = 11.84SDD162 pKa = 3.0IAIDD166 pKa = 4.36EE167 pKa = 4.38ISLTVTSSPDD177 pKa = 3.28PEE179 pKa = 4.39IDD181 pKa = 3.39VTGNSLPIIGDD192 pKa = 3.48GTNAPSINDD201 pKa = 3.26NTDD204 pKa = 3.13FGTVQVGSEE213 pKa = 4.21TSIKK217 pKa = 10.06TYY219 pKa = 10.37TITNNGSLDD228 pKa = 3.8LVLGTSTISGSSDD241 pKa = 3.2FVISTFPGTTITPGNSEE258 pKa = 4.04IIEE261 pKa = 4.02ISFNTLSLGIQTAQLSIVNNDD282 pKa = 3.54PDD284 pKa = 4.02EE285 pKa = 4.43NPYY288 pKa = 10.63LINLSAEE295 pKa = 4.27GTQAFYY301 pKa = 11.09DD302 pKa = 3.71SDD304 pKa = 4.18GDD306 pKa = 4.43GVFDD310 pKa = 6.2DD311 pKa = 5.63VDD313 pKa = 3.9IDD315 pKa = 4.48DD316 pKa = 5.6DD317 pKa = 4.34NDD319 pKa = 4.71GIIDD323 pKa = 3.77SLEE326 pKa = 3.9EE327 pKa = 4.53SNCSGSIITNSVNYY341 pKa = 10.05KK342 pKa = 10.08FLNEE346 pKa = 4.05TFGTGGRR353 pKa = 11.84TTINTSYY360 pKa = 11.18NATTTYY366 pKa = 10.31CYY368 pKa = 10.68EE369 pKa = 5.06DD370 pKa = 3.7GTAGTDD376 pKa = 3.36TTGCPTLSDD385 pKa = 3.31TSLNDD390 pKa = 3.36GEE392 pKa = 4.5YY393 pKa = 9.72TVYY396 pKa = 10.99SRR398 pKa = 11.84ITNNDD403 pKa = 3.07DD404 pKa = 3.16VADD407 pKa = 5.25GINVDD412 pKa = 3.33IASWAEE418 pKa = 3.85DD419 pKa = 3.37FWYY422 pKa = 10.09EE423 pKa = 5.07GEE425 pKa = 4.24DD426 pKa = 3.67HH427 pKa = 6.82TPGDD431 pKa = 3.32IDD433 pKa = 3.35GRR435 pKa = 11.84MAIFNASYY443 pKa = 10.97DD444 pKa = 3.4PGVFYY449 pKa = 9.85TASITGALPNVPITYY464 pKa = 10.05DD465 pKa = 3.51FWVLNIDD472 pKa = 3.77RR473 pKa = 11.84TDD475 pKa = 3.58APCVDD480 pKa = 4.39GGSTCTGPGVDD491 pKa = 4.4GSRR494 pKa = 11.84LRR496 pKa = 11.84PNVLVEE502 pKa = 4.46FRR504 pKa = 11.84DD505 pKa = 3.58LTGNVLASITTGDD518 pKa = 3.65IDD520 pKa = 3.9PTPVGDD526 pKa = 4.42TAGNWMNFRR535 pKa = 11.84ADD537 pKa = 3.26LVLNVSQFEE546 pKa = 4.46VVFINNEE553 pKa = 4.0TGGLGNDD560 pKa = 4.49LALDD564 pKa = 4.65DD565 pKa = 4.68IKK567 pKa = 10.81IEE569 pKa = 4.02QTLCDD574 pKa = 3.73VDD576 pKa = 3.56NDD578 pKa = 4.68GIADD582 pKa = 3.95VFDD585 pKa = 5.64LDD587 pKa = 4.56SDD589 pKa = 4.03DD590 pKa = 5.9DD591 pKa = 5.29GIVDD595 pKa = 5.61LIEE598 pKa = 4.47VGLGALNNGNGVIDD612 pKa = 4.34PVVGWVDD619 pKa = 3.44VNGDD623 pKa = 4.0GLHH626 pKa = 7.0DD627 pKa = 3.87AAAGNVIPDD636 pKa = 3.71TDD638 pKa = 4.01GDD640 pKa = 4.08GTPDD644 pKa = 3.88YY645 pKa = 11.4LDD647 pKa = 5.04LDD649 pKa = 4.21SDD651 pKa = 3.77NDD653 pKa = 4.41SIFDD657 pKa = 3.62VDD659 pKa = 4.19EE660 pKa = 4.84SGATNSSMPGFINEE674 pKa = 4.85DD675 pKa = 3.05GDD677 pKa = 4.03INGDD681 pKa = 3.34GTGNNTEE688 pKa = 4.07TEE690 pKa = 4.07AFRR693 pKa = 11.84EE694 pKa = 4.03KK695 pKa = 10.6DD696 pKa = 3.09TDD698 pKa = 3.66GDD700 pKa = 4.13GTSEE704 pKa = 4.48YY705 pKa = 10.59YY706 pKa = 10.93GDD708 pKa = 5.26GILDD712 pKa = 3.71IYY714 pKa = 9.83EE715 pKa = 4.59HH716 pKa = 7.35SSGLYY721 pKa = 10.7GNANQTNPIDD731 pKa = 4.08SDD733 pKa = 3.76GDD735 pKa = 4.03TIPDD739 pKa = 3.68YY740 pKa = 11.45LDD742 pKa = 3.47PTTNTTHH749 pKa = 7.73DD750 pKa = 3.37ISTTLYY756 pKa = 11.16ASLDD760 pKa = 3.78ANNDD764 pKa = 3.88GIIDD768 pKa = 3.91DD769 pKa = 5.11TIDD772 pKa = 3.34TDD774 pKa = 4.09GDD776 pKa = 4.47GILDD780 pKa = 4.93LYY782 pKa = 10.66DD783 pKa = 3.79TDD785 pKa = 5.71DD786 pKa = 3.96MLFGSPRR793 pKa = 11.84DD794 pKa = 3.63LDD796 pKa = 3.43RR797 pKa = 11.84SLYY800 pKa = 10.18IDD802 pKa = 3.54FDD804 pKa = 3.56GRR806 pKa = 11.84NDD808 pKa = 3.65YY809 pKa = 11.26AQDD812 pKa = 3.37TSLLGGLTDD821 pKa = 3.65ATIMAWINIDD831 pKa = 4.93DD832 pKa = 4.42LFSNQGFIVGQNNFNLKK849 pKa = 9.91INNSRR854 pKa = 11.84NLIATANGTTLSNSTVLNTSQWIHH878 pKa = 4.8VAAVYY883 pKa = 10.75SSGTNTFNLYY893 pKa = 10.89VNGEE897 pKa = 4.28EE898 pKa = 4.82VNTTTAASALNVDD911 pKa = 4.01SSLLTLAKK919 pKa = 10.58NPSTDD924 pKa = 2.93TEE926 pKa = 4.48YY927 pKa = 11.05FNGGIEE933 pKa = 3.99EE934 pKa = 4.16VKK936 pKa = 10.54IFGIALTEE944 pKa = 4.0LQLQKK949 pKa = 10.18MVYY952 pKa = 10.13QKK954 pKa = 10.39IEE956 pKa = 4.38DD957 pKa = 3.55NGQILGEE964 pKa = 4.83IIPIDD969 pKa = 4.13IDD971 pKa = 4.26VAWLDD976 pKa = 3.31LLRR979 pKa = 11.84YY980 pKa = 9.76YY981 pKa = 11.2RR982 pKa = 11.84MDD984 pKa = 4.14AYY986 pKa = 11.04QDD988 pKa = 3.96DD989 pKa = 4.44VVDD992 pKa = 4.71NYY994 pKa = 7.81TTSIIDD1000 pKa = 3.37QYY1002 pKa = 10.53PGTFARR1008 pKa = 11.84CYY1010 pKa = 8.62NVKK1013 pKa = 10.29NIKK1016 pKa = 10.23VEE1018 pKa = 4.04TAPMPFVTQAVPSNYY1033 pKa = 10.01DD1034 pKa = 2.58IGVAVSQNNDD1044 pKa = 2.64VRR1046 pKa = 11.84GDD1048 pKa = 3.74DD1049 pKa = 3.59VKK1051 pKa = 11.36DD1052 pKa = 3.67YY1053 pKa = 10.8DD1054 pKa = 3.64WSITHH1059 pKa = 6.52IRR1061 pKa = 11.84HH1062 pKa = 7.18DD1063 pKa = 3.56INLDD1067 pKa = 3.65DD1068 pKa = 4.04FHH1070 pKa = 9.09SDD1072 pKa = 3.2LGLMIDD1078 pKa = 3.62TGVLVNLNNDD1088 pKa = 3.4TALQNNWYY1096 pKa = 9.98LNLDD1100 pKa = 3.53GVVDD1104 pKa = 5.07LNGEE1108 pKa = 4.2SQLVQTSEE1116 pKa = 4.57SILDD1120 pKa = 3.64IDD1122 pKa = 3.79SEE1124 pKa = 5.15GYY1126 pKa = 9.68IEE1128 pKa = 5.92RR1129 pKa = 11.84DD1130 pKa = 3.3QQGTANSFTYY1140 pKa = 10.21NYY1142 pKa = 8.07WSSPVSVIGAGVNNTPFSISDD1163 pKa = 3.5VLRR1166 pKa = 11.84DD1167 pKa = 3.77GTTSSTPINLDD1178 pKa = 2.81FDD1180 pKa = 4.23TATTLSTADD1189 pKa = 3.94PYY1191 pKa = 11.73YY1192 pKa = 11.13SDD1194 pKa = 4.61GALTNPRR1201 pKa = 11.84KK1202 pKa = 9.51IASYY1206 pKa = 9.31WLWKK1210 pKa = 10.05FVNQTNDD1217 pKa = 3.05YY1218 pKa = 11.16ANWEE1222 pKa = 4.0WFGAYY1227 pKa = 10.43NNINVADD1234 pKa = 4.32GFSMKK1239 pKa = 10.22GVSSTSSVTDD1249 pKa = 3.11SQNYY1253 pKa = 8.07VFVGKK1258 pKa = 9.53PNNAPNVTGEE1268 pKa = 4.2IVHH1271 pKa = 5.36TTFPGGTSIEE1281 pKa = 4.53GYY1283 pKa = 8.84TYY1285 pKa = 11.38NSLTGNPFPSAMDD1298 pKa = 3.8ADD1300 pKa = 4.48QFILDD1305 pKa = 4.87NISSTTGTIYY1315 pKa = 10.31FWEE1318 pKa = 4.16HH1319 pKa = 5.36WGGGNHH1325 pKa = 5.69NWEE1328 pKa = 5.03DD1329 pKa = 3.56YY1330 pKa = 9.9RR1331 pKa = 11.84AGYY1334 pKa = 10.61SMYY1337 pKa = 10.08TMSGGLPGVSHH1348 pKa = 7.88PDD1350 pKa = 3.26GANVGGGTKK1359 pKa = 9.69TPGQYY1364 pKa = 9.96IPVGQGFYY1372 pKa = 10.19IVSSNAGGDD1381 pKa = 3.64VVFKK1385 pKa = 10.66NSQRR1389 pKa = 11.84IFKK1392 pKa = 10.34IEE1394 pKa = 4.46LDD1396 pKa = 3.85DD1397 pKa = 4.68DD1398 pKa = 4.37TNSDD1402 pKa = 2.99HH1403 pKa = 7.99SIFTRR1408 pKa = 11.84AASKK1412 pKa = 11.28NNINEE1417 pKa = 4.0ASTEE1421 pKa = 4.13RR1422 pKa = 11.84NNNTTNEE1429 pKa = 4.03KK1430 pKa = 9.88QRR1432 pKa = 11.84IRR1434 pKa = 11.84LGFEE1438 pKa = 3.92SPDD1441 pKa = 3.41GYY1443 pKa = 10.86HH1444 pKa = 6.08RR1445 pKa = 11.84QVLMAFLEE1453 pKa = 4.76GATDD1457 pKa = 5.43AIDD1460 pKa = 3.72PGYY1463 pKa = 10.76DD1464 pKa = 3.46GEE1466 pKa = 6.08AGDD1469 pKa = 4.62YY1470 pKa = 10.71LPNDD1474 pKa = 3.61GFFIQDD1480 pKa = 3.39DD1481 pKa = 3.96KK1482 pKa = 11.59YY1483 pKa = 10.6YY1484 pKa = 10.92AIIAFGEE1491 pKa = 3.95FDD1493 pKa = 4.0EE1494 pKa = 4.51EE1495 pKa = 4.8RR1496 pKa = 11.84EE1497 pKa = 4.15VPISIFIDD1505 pKa = 3.56EE1506 pKa = 5.06ANDD1509 pKa = 3.67GGNQKK1514 pKa = 10.3FMVDD1518 pKa = 3.87RR1519 pKa = 11.84IEE1521 pKa = 4.63NMPEE1525 pKa = 3.85TISIYY1530 pKa = 10.5IKK1532 pKa = 10.83DD1533 pKa = 3.87NEE1535 pKa = 4.38TGILHH1540 pKa = 7.36DD1541 pKa = 3.42IKK1543 pKa = 11.56NNVFEE1548 pKa = 4.56VALSTGEE1555 pKa = 3.93HH1556 pKa = 5.29KK1557 pKa = 9.66TRR1559 pKa = 11.84FSVVFQDD1566 pKa = 5.16RR1567 pKa = 11.84VLSLNAEE1574 pKa = 4.19LAEE1577 pKa = 4.45SNDD1580 pKa = 3.15LKK1582 pKa = 11.57VFMNNSNSEE1591 pKa = 3.71IQIINNKK1598 pKa = 8.63NLEE1601 pKa = 4.24LNEE1604 pKa = 3.69ISLYY1608 pKa = 10.96NSIGQTINSWNHH1620 pKa = 6.03LGNDD1624 pKa = 3.59MMISLPLNNISSGVYY1639 pKa = 9.33IVTIKK1644 pKa = 6.46TTKK1647 pKa = 10.42GVVSQKK1653 pKa = 10.63IIIKK1657 pKa = 10.26

Molecular weight:
179.9 kDa
Isoelectric point according different methods:






Protein with the highest isoelectric point:
>tr|A0A1D8PBP7|A0A1D8PBP7_9FLAO PDZ domain-containing protein OS=Urechidicola croceus OX=1850246 GN=LPB138_04700 PE=4 SV=1
MM1 pKa = 7.63KK2 pKa = 10.41KK3 pKa = 10.58GILFIAAMLLLVSVSEE19 pKa = 4.27ANNNGRR25 pKa = 11.84INSRR29 pKa = 11.84MGYY32 pKa = 7.83TNVYY36 pKa = 9.37DD37 pKa = 3.85AQPIQFKK44 pKa = 10.64EE45 pKa = 3.99KK46 pKa = 10.38GIQFYY51 pKa = 11.33VFLDD55 pKa = 3.93GQFDD59 pKa = 4.51FSTRR63 pKa = 11.84PNRR66 pKa = 11.84NFNNQYY72 pKa = 10.98KK73 pKa = 10.15NLNSRR78 pKa = 11.84RR79 pKa = 11.84NLRR82 pKa = 11.84IINNRR87 pKa = 11.84GLRR90 pKa = 11.84IEE92 pKa = 3.89RR93 pKa = 11.84DD94 pKa = 3.13YY95 pKa = 11.07RR96 pKa = 11.84GRR98 pKa = 11.84IRR100 pKa = 11.84RR101 pKa = 11.84VGNVPINYY109 pKa = 8.73NRR111 pKa = 11.84LGKK114 pKa = 7.85VTRR117 pKa = 11.84IGSVFIGYY125 pKa = 8.87DD126 pKa = 3.47FRR128 pKa = 11.84QVSQVGGLNVLYY140 pKa = 9.99NHH142 pKa = 7.27WGDD145 pKa = 3.14ARR147 pKa = 11.84YY148 pKa = 9.69IGQVKK153 pKa = 9.72YY154 pKa = 10.94NNHH157 pKa = 6.0RR158 pKa = 11.84FNGNFSVYY166 pKa = 9.03NTWNTWEE173 pKa = 4.04YY174 pKa = 11.52DD175 pKa = 3.54FNNDD179 pKa = 3.01FFLRR183 pKa = 11.84SNFRR187 pKa = 11.84NDD189 pKa = 3.0FEE191 pKa = 5.62SFHH194 pKa = 7.07EE195 pKa = 4.65DD196 pKa = 3.94DD197 pKa = 3.58NYY199 pKa = 11.38LYY201 pKa = 10.77YY202 pKa = 10.39RR203 pKa = 11.84SKK205 pKa = 10.98GVKK208 pKa = 9.27KK209 pKa = 10.32GKK211 pKa = 9.39KK212 pKa = 9.34GNVIKK217 pKa = 10.67RR218 pKa = 11.84KK219 pKa = 9.54KK220 pKa = 9.87NKK222 pKa = 9.89QKK224 pKa = 10.45VFPNKK229 pKa = 7.86NTRR232 pKa = 11.84RR233 pKa = 3.75

Molecular weight:
27.8 kDa
Isoelectric point according different methods:






Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2946

0

2946

1027031

49

6637

348.6

39.45

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.46 ± 0.047

0.716 ± 0.015

5.856 ± 0.091

6.735 ± 0.044

5.265 ± 0.033

6.241 ± 0.047

1.676 ± 0.022

8.741 ± 0.042

8.196 ± 0.088

9.059 ± 0.059

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.071 ± 0.027

6.798 ± 0.05

3.209 ± 0.025

3.154 ± 0.028

3.113 ± 0.036

6.721 ± 0.041

5.856 ± 0.09

6.045 ± 0.036

1.011 ± 0.016

4.077 ± 0.032

Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski