Mungbean yellow mosaic virus

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus

Average proteome isoelectric point is 8.65

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 7 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q76WK9|Q76WK9_9GEMI 1L4 protein OS=Mungbean yellow mosaic virus OX=33726 GN=1L4 PE=4 SV=1
MM1 pKa = 7.47PRR3 pKa = 11.84LGRR6 pKa = 11.84FAINAKK12 pKa = 10.31NYY14 pKa = 8.34FLTYY18 pKa = 9.31PRR20 pKa = 11.84CPLRR24 pKa = 11.84KK25 pKa = 9.05EE26 pKa = 4.04DD27 pKa = 4.55ALEE30 pKa = 4.05EE31 pKa = 4.04LLALSTPVNKK41 pKa = 10.24KK42 pKa = 9.97FIRR45 pKa = 11.84VCRR48 pKa = 11.84EE49 pKa = 3.42LHH51 pKa = 6.59EE52 pKa = 5.63DD53 pKa = 4.09GEE55 pKa = 4.56PHH57 pKa = 6.86LHH59 pKa = 6.48VLLQFEE65 pKa = 5.68GKK67 pKa = 9.58FQTKK71 pKa = 8.6NEE73 pKa = 4.04RR74 pKa = 11.84FFDD77 pKa = 4.07LVSSTRR83 pKa = 11.84SAHH86 pKa = 4.49YY87 pKa = 10.1HH88 pKa = 6.27PNVQAAKK95 pKa = 9.85SASDD99 pKa = 3.33VKK101 pKa = 11.21SYY103 pKa = 10.0MDD105 pKa = 3.66KK106 pKa = 11.31DD107 pKa = 3.77GDD109 pKa = 4.26VVDD112 pKa = 4.63HH113 pKa = 7.31GSFQVDD119 pKa = 3.0GRR121 pKa = 11.84SARR124 pKa = 11.84GGKK127 pKa = 9.48QSANDD132 pKa = 3.73AYY134 pKa = 10.87AEE136 pKa = 4.09ALNSGSKK143 pKa = 10.17LQALNILRR151 pKa = 11.84EE152 pKa = 4.22KK153 pKa = 10.72APKK156 pKa = 10.11DD157 pKa = 3.66YY158 pKa = 10.78ILQFHH163 pKa = 6.82NLNCNLSRR171 pKa = 11.84IFSDD175 pKa = 3.71EE176 pKa = 3.88VPLYY180 pKa = 10.27VSPYY184 pKa = 9.88SLSAFDD190 pKa = 4.97KK191 pKa = 8.82VPSYY195 pKa = 10.55ISSWASEE202 pKa = 4.24NVRR205 pKa = 11.84HH206 pKa = 6.07PAAPEE211 pKa = 3.75RR212 pKa = 11.84PISIVIEE219 pKa = 4.23GDD221 pKa = 3.2SRR223 pKa = 11.84TGKK226 pKa = 8.55TMWARR231 pKa = 11.84ALGPHH236 pKa = 6.7NYY238 pKa = 10.19LCGHH242 pKa = 7.39LDD244 pKa = 4.09LNSKK248 pKa = 10.03IYY250 pKa = 11.22SNDD253 pKa = 2.14AWYY256 pKa = 10.92NVIDD260 pKa = 5.2DD261 pKa = 4.41VDD263 pKa = 3.61PHH265 pKa = 5.85YY266 pKa = 11.0LKK268 pKa = 10.7HH269 pKa = 6.2FKK271 pKa = 10.7EE272 pKa = 4.46FMGAQRR278 pKa = 11.84DD279 pKa = 3.63WQSNVKK285 pKa = 9.78YY286 pKa = 10.47GKK288 pKa = 7.21PTHH291 pKa = 6.52IKK293 pKa = 10.55GGIPTIFLCNPGPKK307 pKa = 9.27SSYY310 pKa = 10.57KK311 pKa = 10.43EE312 pKa = 4.06YY313 pKa = 10.85LDD315 pKa = 4.39EE316 pKa = 6.14ADD318 pKa = 3.59NTALKK323 pKa = 10.54LWASKK328 pKa = 10.37NAEE331 pKa = 4.13FYY333 pKa = 9.64TLKK336 pKa = 10.62EE337 pKa = 4.03PLFSSVDD344 pKa = 3.38QSATQGCQEE353 pKa = 4.6ASNSTLSNN361 pKa = 3.4

Molecular weight: 40.72 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|Q76WL1|Q76WL1_9GEMI Protein V2 OS=Mungbean yellow mosaic virus OX=33726 GN=1R2 PE=3 SV=1
MM1 pKa = 7.18SNVRR5 pKa = 11.84RR6 pKa = 11.84RR7 pKa = 11.84LIFDD11 pKa = 3.79TPLSLPATAGSVPASAKK28 pKa = 9.31RR29 pKa = 11.84RR30 pKa = 11.84RR31 pKa = 11.84WTNRR35 pKa = 11.84PMWRR39 pKa = 11.84KK40 pKa = 7.82PRR42 pKa = 11.84YY43 pKa = 7.63YY44 pKa = 10.29RR45 pKa = 11.84LYY47 pKa = 10.24RR48 pKa = 11.84SPDD51 pKa = 3.2VPRR54 pKa = 11.84GCEE57 pKa = 4.34GPCKK61 pKa = 10.07VQSFEE66 pKa = 4.11AKK68 pKa = 10.01HH69 pKa = 6.45DD70 pKa = 3.59ISHH73 pKa = 7.09LGKK76 pKa = 10.4VICVTDD82 pKa = 3.33VTRR85 pKa = 11.84GNGITHH91 pKa = 6.78RR92 pKa = 11.84VGKK95 pKa = 9.5RR96 pKa = 11.84FCVKK100 pKa = 10.5SIWVTGKK107 pKa = 9.22IWMDD111 pKa = 3.31EE112 pKa = 4.07NIKK115 pKa = 9.32TKK117 pKa = 10.61NHH119 pKa = 6.01TNTVMFKK126 pKa = 10.36LVRR129 pKa = 11.84DD130 pKa = 3.79RR131 pKa = 11.84RR132 pKa = 11.84PFGTPQDD139 pKa = 3.81FGQVFNMYY147 pKa = 10.66DD148 pKa = 3.86NEE150 pKa = 4.34PSTATVKK157 pKa = 10.81NDD159 pKa = 2.84LRR161 pKa = 11.84DD162 pKa = 3.4RR163 pKa = 11.84YY164 pKa = 9.76QVVRR168 pKa = 11.84KK169 pKa = 8.4FQATVTGGQYY179 pKa = 10.83ASKK182 pKa = 9.91EE183 pKa = 3.76QAIVSKK189 pKa = 9.71FYY191 pKa = 10.67RR192 pKa = 11.84VNNYY196 pKa = 7.79VVYY199 pKa = 10.46NHH201 pKa = 6.03QEE203 pKa = 3.42AAKK206 pKa = 10.4YY207 pKa = 9.25EE208 pKa = 4.13NHH210 pKa = 6.46TEE212 pKa = 3.99NALLLYY218 pKa = 7.29MACTHH223 pKa = 7.07ASNPVYY229 pKa = 9.86ATLKK233 pKa = 9.47IRR235 pKa = 11.84IYY237 pKa = 10.59FYY239 pKa = 11.32DD240 pKa = 4.06SISNN244 pKa = 3.66

Molecular weight: 28.33 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

7

0

7

1249

74

361

178.4

20.45

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.444 ± 0.904

1.761 ± 0.229

4.564 ± 0.708

3.843 ± 0.598

4.323 ± 0.219

5.124 ± 0.427

3.683 ± 0.463

5.685 ± 0.981

6.725 ± 0.327

9.367 ± 1.339

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.562 ± 0.623

5.925 ± 0.397

4.804 ± 0.653

3.283 ± 0.448

6.325 ± 0.822

8.487 ± 0.954

5.765 ± 1.15

6.165 ± 0.801

1.441 ± 0.125

4.724 ± 0.516
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski