Mycobacterium montefiorense

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinomycetia; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium simiae complex

Average proteome isoelectric point is 6.06

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5384 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2R5HH93|A0A2R5HH93_9MYCO Uncharacterized protein OS=Mycobacterium montefiorense OX=154654 GN=MmonteBS_49640 PE=4 SV=1
MM1 pKa = 7.47KK2 pKa = 9.95VTVDD6 pKa = 3.5QNICASSGNCVMNAPEE22 pKa = 4.59VFDD25 pKa = 4.66QRR27 pKa = 11.84DD28 pKa = 3.24EE29 pKa = 4.83DD30 pKa = 4.48GVVEE34 pKa = 5.3LLTEE38 pKa = 4.08QPSADD43 pKa = 3.36QTDD46 pKa = 4.19GVRR49 pKa = 11.84QAAAACPAQAIYY61 pKa = 10.32IEE63 pKa = 4.43EE64 pKa = 4.1

Molecular weight: 6.84 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2R5HD44|A0A2R5HD44_9MYCO LuxR family transcriptional regulator OS=Mycobacterium montefiorense OX=154654 GN=MmonteBS_34340 PE=4 SV=1
MM1 pKa = 7.69AKK3 pKa = 10.06GKK5 pKa = 8.69RR6 pKa = 11.84TFQPNNRR13 pKa = 11.84RR14 pKa = 11.84RR15 pKa = 11.84ARR17 pKa = 11.84VHH19 pKa = 5.99GFRR22 pKa = 11.84LRR24 pKa = 11.84MRR26 pKa = 11.84TRR28 pKa = 11.84AGRR31 pKa = 11.84AIVSGRR37 pKa = 11.84RR38 pKa = 11.84RR39 pKa = 11.84KK40 pKa = 9.66GRR42 pKa = 11.84RR43 pKa = 11.84ALSAA47 pKa = 3.69

Molecular weight: 5.52 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5384

0

5384

1725077

39

4196

320.4

34.45

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

12.812 ± 0.053

0.866 ± 0.009

6.166 ± 0.027

5.137 ± 0.032

3.115 ± 0.018

8.773 ± 0.027

2.271 ± 0.014

4.489 ± 0.022

2.245 ± 0.024

9.869 ± 0.034

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.134 ± 0.015

2.401 ± 0.018

5.779 ± 0.03

3.201 ± 0.018

7.034 ± 0.028

5.651 ± 0.021

5.903 ± 0.018

8.427 ± 0.024

1.518 ± 0.013

2.199 ± 0.016
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski