Amino acid dipepetide frequency for Hubei myriapoda virus 9

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
6.956AlaAla: 6.956 ± 2.556
1.605AlaCys: 1.605 ± 0.328
1.605AlaAsp: 1.605 ± 1.458
2.675AlaGlu: 2.675 ± 0.855
0.0AlaPhe: 0.0 ± 0.0
4.28AlaGly: 4.28 ± 2.213
0.535AlaHis: 0.535 ± 0.388
4.815AlaIle: 4.815 ± 0.984
1.605AlaLys: 1.605 ± 0.909
6.421AlaLeu: 6.421 ± 2.289
2.675AlaMet: 2.675 ± 0.929
1.605AlaAsn: 1.605 ± 0.952
4.28AlaPro: 4.28 ± 1.747
4.28AlaGln: 4.28 ± 1.34
3.745AlaArg: 3.745 ± 2.431
5.886AlaSer: 5.886 ± 1.42
3.21AlaThr: 3.21 ± 1.818
6.421AlaVal: 6.421 ± 1.736
2.14AlaTrp: 2.14 ± 0.44
0.0AlaTyr: 0.0 ± 0.0
0.0AlaXaa: 0.0 ± 0.0
Cys
0.535CysAla: 0.535 ± 0.552
0.535CysCys: 0.535 ± 0.486
1.605CysAsp: 1.605 ± 1.123
1.07CysGlu: 1.07 ± 0.473
0.535CysPhe: 0.535 ± 0.388
3.745CysGly: 3.745 ± 1.185
0.0CysHis: 0.0 ± 0.0
1.07CysIle: 1.07 ± 1.105
1.07CysLys: 1.07 ± 0.714
3.745CysLeu: 3.745 ± 0.989
0.535CysMet: 0.535 ± 0.608
2.14CysAsn: 2.14 ± 1.137
1.07CysPro: 1.07 ± 0.503
2.14CysGln: 2.14 ± 1.005
1.07CysArg: 1.07 ± 0.473
3.21CysSer: 3.21 ± 2.573
1.605CysThr: 1.605 ± 1.01
1.605CysVal: 1.605 ± 1.165
0.0CysTrp: 0.0 ± 0.0
0.535CysTyr: 0.535 ± 0.552
0.0CysXaa: 0.0 ± 0.0
Asp
2.675AspAla: 2.675 ± 0.762
1.605AspCys: 1.605 ± 0.571
2.14AspAsp: 2.14 ± 0.959
0.535AspGlu: 0.535 ± 0.608
1.07AspPhe: 1.07 ± 0.72
2.14AspGly: 2.14 ± 0.352
1.605AspHis: 1.605 ± 1.193
3.745AspIle: 3.745 ± 1.028
2.14AspLys: 2.14 ± 0.959
5.35AspLeu: 5.35 ± 1.329
1.07AspMet: 1.07 ± 0.503
0.535AspAsn: 0.535 ± 0.486
3.745AspPro: 3.745 ± 1.028
1.605AspGln: 1.605 ± 0.666
3.21AspArg: 3.21 ± 3.314
6.421AspSer: 6.421 ± 1.643
1.07AspThr: 1.07 ± 0.72
4.815AspVal: 4.815 ± 2.728
2.675AspTrp: 2.675 ± 1.324
1.605AspTyr: 1.605 ± 0.666
0.0AspXaa: 0.0 ± 0.0
Glu
2.675GluAla: 2.675 ± 0.762
1.605GluCys: 1.605 ± 0.666
3.21GluAsp: 3.21 ± 0.871
1.07GluGlu: 1.07 ± 0.503
3.21GluPhe: 3.21 ± 2.161
2.14GluGly: 2.14 ± 1.08
1.07GluHis: 1.07 ± 0.473
1.605GluIle: 1.605 ± 0.666
2.14GluLys: 2.14 ± 1.162
3.21GluLeu: 3.21 ± 0.871
1.07GluMet: 1.07 ± 0.473
1.07GluAsn: 1.07 ± 0.473
2.14GluPro: 2.14 ± 1.191
2.675GluGln: 2.675 ± 0.327
2.675GluArg: 2.675 ± 2.143
5.35GluSer: 5.35 ± 2.652
1.605GluThr: 1.605 ± 0.952
3.745GluVal: 3.745 ± 1.509
1.07GluTrp: 1.07 ± 0.972
1.605GluTyr: 1.605 ± 0.952
0.0GluXaa: 0.0 ± 0.0
Phe
1.07PheAla: 1.07 ± 0.776
2.675PheCys: 2.675 ± 1.284
1.07PheAsp: 1.07 ± 0.569
0.535PheGlu: 0.535 ± 0.552
0.535PhePhe: 0.535 ± 0.608
3.745PheGly: 3.745 ± 1.185
2.14PheHis: 2.14 ± 0.352
1.07PheIle: 1.07 ± 1.215
0.0PheLys: 0.0 ± 0.0
4.815PheLeu: 4.815 ± 0.947
0.535PheMet: 0.535 ± 0.608
2.675PheAsn: 2.675 ± 1.734
2.675PhePro: 2.675 ± 1.842
1.605PheGln: 1.605 ± 1.068
3.21PheArg: 3.21 ± 0.817
3.745PheSer: 3.745 ± 1.082
0.535PheThr: 0.535 ± 0.486
2.675PheVal: 2.675 ± 1.371
0.535PheTrp: 0.535 ± 0.552
2.14PheTyr: 2.14 ± 1.779
0.0PheXaa: 0.0 ± 0.0
Gly
3.21GlyAla: 3.21 ± 1.126
2.675GlyCys: 2.675 ± 2.143
2.675GlyAsp: 2.675 ± 1.001
2.675GlyGlu: 2.675 ± 1.001
5.35GlyPhe: 5.35 ± 1.535
8.026GlyGly: 8.026 ± 2.33
0.0GlyHis: 0.0 ± 0.0
5.35GlyIle: 5.35 ± 1.36
4.815GlyLys: 4.815 ± 1.798
6.421GlyLeu: 6.421 ± 0.885
2.675GlyMet: 2.675 ± 1.176
2.675GlyAsn: 2.675 ± 1.21
4.28GlyPro: 4.28 ± 0.891
3.21GlyGln: 3.21 ± 1.332
4.815GlyArg: 4.815 ± 2.011
5.35GlySer: 5.35 ± 1.343
5.886GlyThr: 5.886 ± 2.563
4.28GlyVal: 4.28 ± 0.745
1.07GlyTrp: 1.07 ± 0.646
2.14GlyTyr: 2.14 ± 1.292
0.0GlyXaa: 0.0 ± 0.0
His
0.0HisAla: 0.0 ± 0.0
1.605HisCys: 1.605 ± 0.666
1.07HisAsp: 1.07 ± 0.503
0.535HisGlu: 0.535 ± 0.608
2.14HisPhe: 2.14 ± 1.139
2.675HisGly: 2.675 ± 1.291
0.535HisHis: 0.535 ± 0.388
0.535HisIle: 0.535 ± 0.608
0.0HisLys: 0.0 ± 0.0
2.14HisLeu: 2.14 ± 0.919
0.535HisMet: 0.535 ± 0.515
0.0HisAsn: 0.0 ± 0.0
1.605HisPro: 1.605 ± 0.755
0.0HisGln: 0.0 ± 0.0
2.14HisArg: 2.14 ± 0.987
1.605HisSer: 1.605 ± 1.01
2.14HisThr: 2.14 ± 0.757
1.605HisVal: 1.605 ± 0.755
0.535HisTrp: 0.535 ± 0.608
0.535HisTyr: 0.535 ± 0.552
0.0HisXaa: 0.0 ± 0.0
Ile
4.815IleAla: 4.815 ± 1.346
1.07IleCys: 1.07 ± 1.105
2.675IleAsp: 2.675 ± 0.327
2.675IleGlu: 2.675 ± 1.54
0.0IlePhe: 0.0 ± 0.0
3.21IleGly: 3.21 ± 1.156
1.07IleHis: 1.07 ± 0.473
0.535IleIle: 0.535 ± 0.552
2.14IleLys: 2.14 ± 1.44
3.745IleLeu: 3.745 ± 3.121
0.535IleMet: 0.535 ± 0.608
0.535IleAsn: 0.535 ± 0.486
3.21IlePro: 3.21 ± 0.419
5.35IleGln: 5.35 ± 0.957
3.21IleArg: 3.21 ± 0.626
3.21IleSer: 3.21 ± 1.177
1.07IleThr: 1.07 ± 0.503
2.675IleVal: 2.675 ± 0.762
1.605IleTrp: 1.605 ± 0.952
3.21IleTyr: 3.21 ± 1.053
0.0IleXaa: 0.0 ± 0.0
Lys
2.675LysAla: 2.675 ± 1.001
2.675LysCys: 2.675 ± 0.929
0.535LysAsp: 0.535 ± 0.388
1.605LysGlu: 1.605 ± 1.123
1.605LysPhe: 1.605 ± 0.658
2.14LysGly: 2.14 ± 0.681
1.07LysHis: 1.07 ± 1.215
2.675LysIle: 2.675 ± 1.453
5.35LysLys: 5.35 ± 2.586
4.28LysLeu: 4.28 ± 2.01
0.535LysMet: 0.535 ± 0.388
1.07LysAsn: 1.07 ± 0.646
3.21LysPro: 3.21 ± 1.224
0.535LysGln: 0.535 ± 0.388
4.28LysArg: 4.28 ± 0.108
4.815LysSer: 4.815 ± 1.75
0.535LysThr: 0.535 ± 0.486
3.21LysVal: 3.21 ± 1.276
0.0LysTrp: 0.0 ± 0.0
1.605LysTyr: 1.605 ± 0.328
0.0LysXaa: 0.0 ± 0.0
Leu
6.956LeuAla: 6.956 ± 1.56
1.07LeuCys: 1.07 ± 0.569
5.886LeuAsp: 5.886 ± 1.478
3.21LeuGlu: 3.21 ± 1.03
5.886LeuPhe: 5.886 ± 1.346
4.815LeuGly: 4.815 ± 0.89
3.21LeuHis: 3.21 ± 1.76
2.675LeuIle: 2.675 ± 0.627
2.675LeuLys: 2.675 ± 1.079
9.096LeuLeu: 9.096 ± 4.099
1.605LeuMet: 1.605 ± 1.127
2.675LeuAsn: 2.675 ± 0.627
7.491LeuPro: 7.491 ± 2.701
3.21LeuGln: 3.21 ± 1.408
5.886LeuArg: 5.886 ± 1.757
10.166LeuSer: 10.166 ± 1.032
4.28LeuThr: 4.28 ± 0.108
3.745LeuVal: 3.745 ± 1.258
2.675LeuTrp: 2.675 ± 1.284
2.14LeuTyr: 2.14 ± 1.08
0.0LeuXaa: 0.0 ± 0.0
Met
2.675MetAla: 2.675 ± 1.371
0.0MetCys: 0.0 ± 0.0
2.14MetAsp: 2.14 ± 1.091
0.535MetGlu: 0.535 ± 0.486
0.535MetPhe: 0.535 ± 0.608
1.07MetGly: 1.07 ± 0.72
1.07MetHis: 1.07 ± 0.776
0.0MetIle: 0.0 ± 0.0
1.07MetLys: 1.07 ± 0.776
2.675MetLeu: 2.675 ± 0.937
0.0MetMet: 0.0 ± 0.0
0.535MetAsn: 0.535 ± 0.486
1.07MetPro: 1.07 ± 1.105
1.07MetGln: 1.07 ± 0.714
1.605MetArg: 1.605 ± 0.328
1.07MetSer: 1.07 ± 1.105
1.605MetThr: 1.605 ± 0.755
1.07MetVal: 1.07 ± 0.72
0.535MetTrp: 0.535 ± 0.608
0.0MetTyr: 0.0 ± 0.0
0.0MetXaa: 0.0 ± 0.0
Asn
1.07AsnAla: 1.07 ± 0.503
0.535AsnCys: 0.535 ± 0.552
1.605AsnAsp: 1.605 ± 1.657
1.07AsnGlu: 1.07 ± 0.473
1.07AsnPhe: 1.07 ± 0.72
3.21AsnGly: 3.21 ± 0.492
1.07AsnHis: 1.07 ± 0.72
0.535AsnIle: 0.535 ± 0.388
0.0AsnLys: 0.0 ± 0.0
2.675AsnLeu: 2.675 ± 0.627
0.0AsnMet: 0.0 ± 0.0
0.535AsnAsn: 0.535 ± 0.486
4.28AsnPro: 4.28 ± 1.389
1.605AsnGln: 1.605 ± 0.665
1.605AsnArg: 1.605 ± 0.902
0.535AsnSer: 0.535 ± 0.608
1.605AsnThr: 1.605 ± 1.01
2.14AsnVal: 2.14 ± 1.005
0.0AsnTrp: 0.0 ± 0.0
1.605AsnTyr: 1.605 ± 0.571
0.0AsnXaa: 0.0 ± 0.0
Pro
6.421ProAla: 6.421 ± 2.853
2.14ProCys: 2.14 ± 1.005
2.14ProAsp: 2.14 ± 0.352
6.956ProGlu: 6.956 ± 2.382
2.675ProPhe: 2.675 ± 0.652
4.815ProGly: 4.815 ± 0.517
1.07ProHis: 1.07 ± 0.569
3.745ProIle: 3.745 ± 0.306
3.21ProLys: 3.21 ± 1.258
5.35ProLeu: 5.35 ± 1.274
1.605ProMet: 1.605 ± 0.909
1.605ProAsn: 1.605 ± 0.902
1.605ProPro: 1.605 ± 0.666
0.0ProGln: 0.0 ± 0.0
2.675ProArg: 2.675 ± 0.653
7.491ProSer: 7.491 ± 2.211
4.28ProThr: 4.28 ± 0.931
2.14ProVal: 2.14 ± 0.352
1.605ProTrp: 1.605 ± 0.328
2.14ProTyr: 2.14 ± 0.681
0.0ProXaa: 0.0 ± 0.0
Gln
2.675GlnAla: 2.675 ± 0.644
1.605GlnCys: 1.605 ± 0.658
1.07GlnAsp: 1.07 ± 1.105
0.0GlnGlu: 0.0 ± 0.0
1.07GlnPhe: 1.07 ± 0.473
3.745GlnGly: 3.745 ± 1.105
1.07GlnHis: 1.07 ± 1.105
2.675GlnIle: 2.675 ± 1.399
3.21GlnLys: 3.21 ± 1.904
5.35GlnLeu: 5.35 ± 2.885
1.07GlnMet: 1.07 ± 0.569
0.535GlnAsn: 0.535 ± 0.486
4.815GlnPro: 4.815 ± 0.517
3.21GlnGln: 3.21 ± 1.371
3.745GlnArg: 3.745 ± 1.028
4.815GlnSer: 4.815 ± 2.063
1.07GlnThr: 1.07 ± 0.473
2.675GlnVal: 2.675 ± 1.001
0.0GlnTrp: 0.0 ± 0.0
1.07GlnTyr: 1.07 ± 0.503
0.0GlnXaa: 0.0 ± 0.0
Arg
1.605ArgAla: 1.605 ± 0.755
1.605ArgCys: 1.605 ± 0.952
3.21ArgAsp: 3.21 ± 3.314
3.21ArgGlu: 3.21 ± 1.826
2.675ArgPhe: 2.675 ± 1.291
5.886ArgGly: 5.886 ± 1.255
2.675ArgHis: 2.675 ± 2.061
2.675ArgIle: 2.675 ± 1.284
3.745ArgLys: 3.745 ± 1.77
5.886ArgLeu: 5.886 ± 3.826
0.0ArgMet: 0.0 ± 0.0
0.535ArgAsn: 0.535 ± 0.486
3.21ArgPro: 3.21 ± 2.021
2.675ArgGln: 2.675 ± 0.327
6.956ArgArg: 6.956 ± 3.102
5.35ArgSer: 5.35 ± 2.009
4.28ArgThr: 4.28 ± 1.682
3.745ArgVal: 3.745 ± 1.092
1.605ArgTrp: 1.605 ± 0.571
3.21ArgTyr: 3.21 ± 1.126
0.0ArgXaa: 0.0 ± 0.0
Ser
6.956SerAla: 6.956 ± 3.265
1.07SerCys: 1.07 ± 1.105
9.096SerAsp: 9.096 ± 1.424
5.886SerGlu: 5.886 ± 1.42
3.21SerPhe: 3.21 ± 1.253
5.886SerGly: 5.886 ± 1.216
2.14SerHis: 2.14 ± 1.091
5.886SerIle: 5.886 ± 1.255
4.815SerLys: 4.815 ± 0.517
4.28SerLeu: 4.28 ± 1.464
1.605SerMet: 1.605 ± 0.328
3.21SerAsn: 3.21 ± 0.958
3.745SerPro: 3.745 ± 1.71
3.21SerGln: 3.21 ± 0.626
3.745SerArg: 3.745 ± 1.401
11.236SerSer: 11.236 ± 2.14
8.026SerThr: 8.026 ± 2.539
5.35SerVal: 5.35 ± 1.815
4.28SerTrp: 4.28 ± 1.085
2.675SerTyr: 2.675 ± 0.855
0.0SerXaa: 0.0 ± 0.0
Thr
4.815ThrAla: 4.815 ± 1.527
0.535ThrCys: 0.535 ± 0.486
1.605ThrAsp: 1.605 ± 0.755
3.21ThrGlu: 3.21 ± 0.817
2.14ThrPhe: 2.14 ± 0.44
5.35ThrGly: 5.35 ± 1.649
0.535ThrHis: 0.535 ± 0.486
1.605ThrIle: 1.605 ± 0.328
2.14ThrLys: 2.14 ± 0.757
3.745ThrLeu: 3.745 ± 1.105
0.535ThrMet: 0.535 ± 0.486
2.675ThrAsn: 2.675 ± 1.544
5.35ThrPro: 5.35 ± 2.445
1.605ThrGln: 1.605 ± 0.902
1.605ThrArg: 1.605 ± 0.952
4.815ThrSer: 4.815 ± 1.268
2.675ThrThr: 2.675 ± 1.337
3.21ThrVal: 3.21 ± 1.352
2.675ThrTrp: 2.675 ± 1.087
2.14ThrTyr: 2.14 ± 0.959
0.0ThrXaa: 0.0 ± 0.0
Val
3.745ValAla: 3.745 ± 1.028
1.07ValCys: 1.07 ± 0.776
3.21ValAsp: 3.21 ± 1.126
3.21ValGlu: 3.21 ± 0.492
2.14ValPhe: 2.14 ± 1.005
5.886ValGly: 5.886 ± 1.575
0.535ValHis: 0.535 ± 0.552
1.605ValIle: 1.605 ± 1.165
1.605ValLys: 1.605 ± 0.909
3.745ValLeu: 3.745 ± 1.877
2.675ValMet: 2.675 ± 1.277
0.535ValAsn: 0.535 ± 0.552
4.28ValPro: 4.28 ± 1.493
3.21ValGln: 3.21 ± 1.15
4.815ValArg: 4.815 ± 2.255
5.886ValSer: 5.886 ± 1.366
4.28ValThr: 4.28 ± 1.61
7.491ValVal: 7.491 ± 0.683
1.605ValTrp: 1.605 ± 0.902
2.675ValTyr: 2.675 ± 0.762
0.0ValXaa: 0.0 ± 0.0
Trp
1.07TrpAla: 1.07 ± 1.105
0.0TrpCys: 0.0 ± 0.0
1.07TrpAsp: 1.07 ± 0.72
3.21TrpGlu: 3.21 ± 1.823
0.535TrpPhe: 0.535 ± 0.486
2.14TrpGly: 2.14 ± 0.946
0.535TrpHis: 0.535 ± 0.486
2.14TrpIle: 2.14 ± 0.92
1.07TrpLys: 1.07 ± 0.646
2.675TrpLeu: 2.675 ± 1.455
0.0TrpMet: 0.0 ± 0.0
0.0TrpAsn: 0.0 ± 0.0
1.07TrpPro: 1.07 ± 0.776
1.605TrpGln: 1.605 ± 0.952
2.675TrpArg: 2.675 ± 1.405
2.14TrpSer: 2.14 ± 0.44
1.07TrpThr: 1.07 ± 0.646
0.0TrpVal: 0.0 ± 0.0
2.14TrpTrp: 2.14 ± 0.946
1.605TrpTyr: 1.605 ± 0.658
0.0TrpXaa: 0.0 ± 0.0
Tyr
2.14TyrAla: 2.14 ± 1.526
2.14TyrCys: 2.14 ± 0.666
2.14TyrAsp: 2.14 ± 0.959
1.07TyrGlu: 1.07 ± 0.503
1.605TyrPhe: 1.605 ± 0.666
2.675TyrGly: 2.675 ± 0.653
0.535TyrHis: 0.535 ± 0.486
1.605TyrIle: 1.605 ± 1.193
1.605TyrLys: 1.605 ± 0.658
3.745TyrLeu: 3.745 ± 1.178
0.535TyrMet: 0.535 ± 0.388
1.605TyrAsn: 1.605 ± 0.909
0.535TyrPro: 0.535 ± 0.552
2.675TyrGln: 2.675 ± 1.21
1.07TyrArg: 1.07 ± 0.473
3.21TyrSer: 3.21 ± 1.258
2.14TyrThr: 2.14 ± 0.352
1.605TyrVal: 1.605 ± 0.328
0.0TyrTrp: 0.0 ± 0.0
1.07TyrTyr: 1.07 ± 0.569
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 4 proteins (1870 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski