Psychromonas sp. B3M02

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Psychromonadaceae; Psychromonas; unclassified Psychromonas

Average proteome isoelectric point is 6.11

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3376 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    

Protein with the lowest isoelectric point:
>tr|A0A366WD60|A0A366WD60_9GAMM Exodeoxyribonuclease III OS=Psychromonas sp. B3M02 OX=2267226 GN=DS885_00805 PE=3 SV=1
MM1 pKa = 7.45LLIAGYY7 pKa = 9.87LLPIAVNASNLDD19 pKa = 3.83LATKK23 pKa = 9.96PLYY26 pKa = 10.16TGTSEE31 pKa = 4.52APMMMLTMGRR41 pKa = 11.84DD42 pKa = 2.96HH43 pKa = 6.59TLFYY47 pKa = 10.59EE48 pKa = 4.94AYY50 pKa = 10.01NDD52 pKa = 4.77ASDD55 pKa = 4.66LDD57 pKa = 4.27GDD59 pKa = 4.63GEE61 pKa = 5.12LDD63 pKa = 3.48TTFKK67 pKa = 10.67PDD69 pKa = 3.32YY70 pKa = 9.25TYY72 pKa = 11.23EE73 pKa = 4.5GYY75 pKa = 10.56FDD77 pKa = 3.64STACYY82 pKa = 9.92KK83 pKa = 10.46YY84 pKa = 10.33RR85 pKa = 11.84SNKK88 pKa = 9.68SRR90 pKa = 11.84FKK92 pKa = 10.44PKK94 pKa = 9.95TIEE97 pKa = 4.31TVCSNNNHH105 pKa = 5.99WSGNFLNYY113 pKa = 9.65LTMTRR118 pKa = 11.84MDD120 pKa = 3.85VLRR123 pKa = 11.84KK124 pKa = 9.6VLYY127 pKa = 10.55GGTRR131 pKa = 11.84STDD134 pKa = 3.59DD135 pKa = 3.43EE136 pKa = 5.34DD137 pKa = 3.57EE138 pKa = 4.8TILEE142 pKa = 4.32RR143 pKa = 11.84VFIPQDD149 pKa = 2.91AHH151 pKa = 6.55SWAKK155 pKa = 10.39AYY157 pKa = 9.72TSVEE161 pKa = 3.54VDD163 pKa = 3.86GYY165 pKa = 11.09DD166 pKa = 3.12ISDD169 pKa = 3.66YY170 pKa = 10.97TPYY173 pKa = 11.04SLPDD177 pKa = 3.02SGKK180 pKa = 7.96QHH182 pKa = 6.61FFGTVTYY189 pKa = 10.33SGLGEE194 pKa = 4.27DD195 pKa = 3.92PILRR199 pKa = 11.84VRR201 pKa = 11.84EE202 pKa = 4.14NISYY206 pKa = 10.89SSDD209 pKa = 3.22DD210 pKa = 3.18WGVWSWASTEE220 pKa = 4.27RR221 pKa = 11.84PVLDD225 pKa = 4.32ASGDD229 pKa = 3.79DD230 pKa = 3.35YY231 pKa = 11.61VVRR234 pKa = 11.84VEE236 pKa = 4.02ACVDD240 pKa = 3.56GFTDD244 pKa = 5.16GNNCDD249 pKa = 4.87LYY251 pKa = 10.7PSGNYY256 pKa = 9.47KK257 pKa = 8.81PTGLLHH263 pKa = 7.69DD264 pKa = 4.59YY265 pKa = 11.58GEE267 pKa = 4.38TDD269 pKa = 3.12QMLFGLLTGSYY280 pKa = 10.35NKK282 pKa = 9.97NLSGGVLRR290 pKa = 11.84RR291 pKa = 11.84AISEE295 pKa = 3.89FSEE298 pKa = 4.57EE299 pKa = 4.05VDD301 pKa = 3.11SDD303 pKa = 3.64TGQFTSTEE311 pKa = 4.07DD312 pKa = 4.05GIVATIDD319 pKa = 3.08KK320 pKa = 10.69LRR322 pKa = 11.84IHH324 pKa = 7.1GFNYY328 pKa = 10.2SNKK331 pKa = 9.49TYY333 pKa = 9.63ATNCGWVVNGAISDD347 pKa = 4.11GQCASWGNPAGEE359 pKa = 4.16MLYY362 pKa = 10.76EE363 pKa = 4.12AMRR366 pKa = 11.84YY367 pKa = 8.7YY368 pKa = 10.84SGVEE372 pKa = 4.05SASPSYY378 pKa = 9.71ATSGSYY384 pKa = 10.16DD385 pKa = 3.57AEE387 pKa = 4.44VGLTSPDD394 pKa = 2.98WDD396 pKa = 4.68DD397 pKa = 3.81PFEE400 pKa = 5.48DD401 pKa = 4.88RR402 pKa = 11.84GTCANPNVLLISDD415 pKa = 4.59ISPSYY420 pKa = 11.17DD421 pKa = 3.22SDD423 pKa = 3.68QLPGVYY429 pKa = 9.94SEE431 pKa = 4.58FTKK434 pKa = 10.82SANNDD439 pKa = 2.9EE440 pKa = 5.37AYY442 pKa = 10.44DD443 pKa = 3.89GTTLPGFSVSEE454 pKa = 3.9LLEE457 pKa = 4.51TISTSEE463 pKa = 4.34GKK465 pKa = 8.93TSGQFFIGQSGTDD478 pKa = 3.24NDD480 pKa = 4.48GAPTAKK486 pKa = 10.43DD487 pKa = 3.04ITGLEE492 pKa = 4.4SVRR495 pKa = 11.84GLAPAEE501 pKa = 3.98PTKK504 pKa = 10.68KK505 pKa = 10.45GSYY508 pKa = 9.86SSAAVAYY515 pKa = 9.07YY516 pKa = 8.81GHH518 pKa = 7.27RR519 pKa = 11.84NDD521 pKa = 3.03IHH523 pKa = 5.61LTKK526 pKa = 10.95DD527 pKa = 2.61EE528 pKa = 4.5DD529 pKa = 4.0QNVTTMVVALASTLPEE545 pKa = 4.17IEE547 pKa = 3.98VDD549 pKa = 3.29VDD551 pKa = 3.84GEE553 pKa = 4.44VIKK556 pKa = 10.51IVPFAKK562 pKa = 10.2SVGWGNKK569 pKa = 8.22ISADD573 pKa = 3.49EE574 pKa = 4.98GDD576 pKa = 4.08FQPTNSIIDD585 pKa = 3.56WYY587 pKa = 10.26IEE589 pKa = 4.34SITDD593 pKa = 3.27TKK595 pKa = 11.23GVFRR599 pKa = 11.84INYY602 pKa = 8.76EE603 pKa = 4.03DD604 pKa = 3.82VEE606 pKa = 4.42QGADD610 pKa = 3.14HH611 pKa = 7.22DD612 pKa = 3.7MDD614 pKa = 4.61MIVKK618 pKa = 8.05YY619 pKa = 9.03TYY621 pKa = 9.01EE622 pKa = 4.08VKK624 pKa = 10.66EE625 pKa = 4.49GLCKK629 pKa = 10.18TYY631 pKa = 10.9DD632 pKa = 3.43SDD634 pKa = 4.76GDD636 pKa = 3.91CTEE639 pKa = 3.95TAKK642 pKa = 10.84GVEE645 pKa = 4.0ITLDD649 pKa = 3.23STYY652 pKa = 11.27AAGGVDD658 pKa = 3.06QHH660 pKa = 7.59AGYY663 pKa = 9.94IISGTTNDD671 pKa = 3.45GMYY674 pKa = 10.77LEE676 pKa = 4.83VKK678 pKa = 10.06DD679 pKa = 4.47VSGANIKK686 pKa = 10.67YY687 pKa = 10.64YY688 pKa = 10.87LDD690 pKa = 4.02TPDD693 pKa = 3.09STVYY697 pKa = 10.87DD698 pKa = 3.56NRR700 pKa = 11.84DD701 pKa = 3.03ISGSTSNLGLYY712 pKa = 7.44ATRR715 pKa = 11.84NFFPSDD721 pKa = 2.95EE722 pKa = 4.33SAADD726 pKa = 3.89FLPSPLWYY734 pKa = 9.32AAKK737 pKa = 9.96WGGFTDD743 pKa = 3.53SDD745 pKa = 4.4GDD747 pKa = 3.82GTPNLDD753 pKa = 4.55SEE755 pKa = 4.7WDD757 pKa = 3.39TSGADD762 pKa = 4.07DD763 pKa = 4.97GGADD767 pKa = 4.45GDD769 pKa = 4.06PDD771 pKa = 3.65NYY773 pKa = 10.67FPVTNAGEE781 pKa = 4.66LKK783 pKa = 10.51DD784 pKa = 3.73QLAAAFDD791 pKa = 3.92LAYY794 pKa = 10.72DD795 pKa = 4.05GLLTGASATYY805 pKa = 10.45SSNLLSSGSLAYY817 pKa = 10.15QSSFEE822 pKa = 4.1EE823 pKa = 4.54EE824 pKa = 3.99TWNGDD829 pKa = 3.07VNAYY833 pKa = 9.03QVSSDD838 pKa = 3.73GEE840 pKa = 4.41YY841 pKa = 10.95ASNATWSAATQLDD854 pKa = 4.29AMDD857 pKa = 5.26PDD859 pKa = 3.43NRR861 pKa = 11.84HH862 pKa = 5.95IYY864 pKa = 8.58TRR866 pKa = 11.84SNEE869 pKa = 3.9SSLLGSQGAVFEE881 pKa = 4.61FTTSAISTTLLSSLTDD897 pKa = 3.28SLTSVSTSTLTDD909 pKa = 3.36SFSEE913 pKa = 4.22SQLFSLLGDD922 pKa = 3.63VTGSTTEE929 pKa = 3.69KK930 pKa = 10.43LAYY933 pKa = 7.68LTNVVGYY940 pKa = 10.31IRR942 pKa = 11.84GDD944 pKa = 3.25RR945 pKa = 11.84DD946 pKa = 3.58NEE948 pKa = 4.06VTTVVDD954 pKa = 4.14GFRR957 pKa = 11.84EE958 pKa = 4.03RR959 pKa = 11.84SSVLGDD965 pKa = 3.34IVNASPYY972 pKa = 9.22YY973 pKa = 9.54VSSAKK978 pKa = 10.52DD979 pKa = 3.11HH980 pKa = 5.72TVATEE985 pKa = 4.14VVAFAANDD993 pKa = 3.77GMVHH997 pKa = 6.77IVDD1000 pKa = 4.21ADD1002 pKa = 3.86DD1003 pKa = 4.34GKK1005 pKa = 11.18EE1006 pKa = 3.59LAAYY1010 pKa = 8.88IPSGVYY1016 pKa = 9.81DD1017 pKa = 3.68ALGNLVDD1024 pKa = 3.36SAYY1027 pKa = 9.35IHH1029 pKa = 6.86EE1030 pKa = 4.28YY1031 pKa = 10.74SVDD1034 pKa = 3.5GGLNAYY1040 pKa = 10.3SDD1042 pKa = 4.44EE1043 pKa = 4.3NDD1045 pKa = 5.32LIDD1048 pKa = 3.6VDD1050 pKa = 4.03INGVSTEE1057 pKa = 4.05VARR1060 pKa = 11.84TTLVGRR1066 pKa = 11.84LGLGVKK1072 pKa = 9.81GLYY1075 pKa = 10.61AIDD1078 pKa = 3.87VSDD1081 pKa = 3.92ISNPTTDD1088 pKa = 2.88MMRR1091 pKa = 11.84WEE1093 pKa = 4.47ITTDD1097 pKa = 2.9TDD1099 pKa = 3.44GFEE1102 pKa = 4.36GLGLSVSEE1110 pKa = 4.02PTIVEE1115 pKa = 4.2LANGKK1120 pKa = 10.33ASVVFANGYY1129 pKa = 10.34NSTDD1133 pKa = 3.61DD1134 pKa = 3.44EE1135 pKa = 4.55GAIYY1139 pKa = 10.2IADD1142 pKa = 4.0LTDD1145 pKa = 3.4GSLIKK1150 pKa = 10.53RR1151 pKa = 11.84LTVGVQTDD1159 pKa = 3.59PTGEE1163 pKa = 3.99DD1164 pKa = 3.31RR1165 pKa = 11.84PNALAQPLLVDD1176 pKa = 4.01NNSDD1180 pKa = 3.93GIADD1184 pKa = 3.69YY1185 pKa = 10.9LYY1187 pKa = 11.04AGDD1190 pKa = 4.98LFGNMWAFDD1199 pKa = 3.74ISSEE1203 pKa = 4.74DD1204 pKa = 3.54PSEE1207 pKa = 3.82WGIKK1211 pKa = 8.01KK1212 pKa = 7.94TAGAPLFTALSPTLDD1227 pKa = 3.43NQEE1230 pKa = 4.47YY1231 pKa = 8.23MSQPITSRR1239 pKa = 11.84PSVVRR1244 pKa = 11.84HH1245 pKa = 5.99PDD1247 pKa = 3.33GEE1249 pKa = 4.55GVLIAFGTGKK1259 pKa = 10.38YY1260 pKa = 9.73VEE1262 pKa = 4.92SDD1264 pKa = 3.3DD1265 pKa = 5.14TSADD1269 pKa = 3.68DD1270 pKa = 3.85QATQSFYY1277 pKa = 11.39VVEE1280 pKa = 4.95DD1281 pKa = 3.71NLGSAVVTAVRR1292 pKa = 11.84SSSGFSNLQKK1302 pKa = 10.8QSITKK1307 pKa = 9.63EE1308 pKa = 3.87SSTNRR1313 pKa = 11.84LLSSNSLNWDD1323 pKa = 4.05EE1324 pKa = 5.27ISGFYY1329 pKa = 9.83IDD1331 pKa = 5.78LVNTEE1336 pKa = 5.06DD1337 pKa = 4.87GNTNNYY1343 pKa = 9.89GEE1345 pKa = 4.32RR1346 pKa = 11.84QVVASTVLGTKK1357 pKa = 10.06VSFVTLIPGTDD1368 pKa = 3.2PCVAGGTGWYY1378 pKa = 8.87MEE1380 pKa = 4.58LNLYY1384 pKa = 8.27TGQTWDD1390 pKa = 3.05TGTEE1394 pKa = 4.1VEE1396 pKa = 5.18DD1397 pKa = 4.92DD1398 pKa = 3.72PSTTVDD1404 pKa = 3.41EE1405 pKa = 4.7SEE1407 pKa = 5.04EE1408 pKa = 4.13IPTDD1412 pKa = 3.42SSNQFLDD1419 pKa = 4.34GVATGLSSVASVTTSTEE1436 pKa = 4.02TITNEE1441 pKa = 3.98DD1442 pKa = 3.6GTTEE1446 pKa = 3.97EE1447 pKa = 4.26VTVFEE1452 pKa = 4.4SAEE1455 pKa = 3.97GLTCITLSTNKK1466 pKa = 7.78QTCFEE1471 pKa = 5.31DD1472 pKa = 3.79DD1473 pKa = 4.11LNITGPVSWRR1483 pKa = 11.84QLYY1486 pKa = 9.99

Molecular weight:
160.43 kDa
Isoelectric point according different methods:






Protein with the highest isoelectric point:
>tr|A0A366W235|A0A366W235_9GAMM DUF1488 domain-containing protein OS=Psychromonas sp. B3M02 OX=2267226 GN=DS885_11835 PE=4 SV=1
MM1 pKa = 7.45KK2 pKa = 9.61RR3 pKa = 11.84TFQPSNTKK11 pKa = 10.0RR12 pKa = 11.84KK13 pKa = 8.73RR14 pKa = 11.84SHH16 pKa = 6.16GFRR19 pKa = 11.84TRR21 pKa = 11.84MATKK25 pKa = 10.18NGRR28 pKa = 11.84AVLARR33 pKa = 11.84RR34 pKa = 11.84RR35 pKa = 11.84AKK37 pKa = 10.5GRR39 pKa = 11.84ASLSAA44 pKa = 3.83

Molecular weight:
5.04 kDa
Isoelectric point according different methods:






Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3376

0

3376

1096779

31

2425

324.9

36.1

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.36 ± 0.043

1.041 ± 0.014

5.554 ± 0.039

6.112 ± 0.043

4.293 ± 0.031

6.418 ± 0.044

2.136 ± 0.022

7.102 ± 0.031

5.751 ± 0.038

10.638 ± 0.054

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.446 ± 0.018

4.592 ± 0.033

3.646 ± 0.028

4.773 ± 0.039

3.747 ± 0.026

6.813 ± 0.034

5.597 ± 0.033

6.744 ± 0.036

1.117 ± 0.016

3.122 ± 0.027

Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski