Ophiocordyceps camponoti-saundersi (nom. inval.)

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; sordariomyceta; Sordariomycetes; Hypocreomycetidae; Hypocreales; Ophiocordycipitaceae; Ophiocordyceps; unclassified Ophiocordyceps

Average proteome isoelectric point is 6.7

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 6946 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A369HK36|A0A369HK36_9HYPO Uncharacterized protein OS=Ophiocordyceps camponoti-saundersi (nom. inval.) OX=2039874 GN=CP533_5381 PE=3 SV=1
MM1 pKa = 7.7KK2 pKa = 10.28YY3 pKa = 10.22GRR5 pKa = 11.84AVVGLVLASTGLADD19 pKa = 5.07EE20 pKa = 5.24CAQKK24 pKa = 10.87CNEE27 pKa = 4.41ANASCLGNADD37 pKa = 4.24ANQSACASDD46 pKa = 3.8YY47 pKa = 10.87AACLGFDD54 pKa = 4.04PFGSDD59 pKa = 3.62GSLITPTACAGGAAPTGGPDD79 pKa = 2.96GGSYY83 pKa = 10.14IGDD86 pKa = 3.53EE87 pKa = 4.12APAAVRR93 pKa = 11.84LADD96 pKa = 4.55DD97 pKa = 4.14GFEE100 pKa = 4.08ATVAPGLPPVSPVSIPDD117 pKa = 3.43VAPLITAPLSAAACAKK133 pKa = 10.24SCEE136 pKa = 4.19QGYY139 pKa = 9.0IACGSSPDD147 pKa = 4.3SSQCDD152 pKa = 3.42ALYY155 pKa = 10.89ADD157 pKa = 4.35CLGYY161 pKa = 11.08NPVGPDD167 pKa = 3.37GSLVAPTACSIRR179 pKa = 11.84GAPTAAPPLVPAPPVVPAPPVVPAPPVVPAPPVVPAPPPVPAPPPVPAPAPVPAPAPVPAPAPVPAPPLVPAPGGAAIAPVVDD262 pKa = 5.49GIGASPIGGIVEE274 pKa = 4.63AGGSTPEE281 pKa = 3.9ACAVSCKK288 pKa = 9.78NAYY291 pKa = 9.48SGCTSNSVADD301 pKa = 3.87QSTCASDD308 pKa = 3.72YY309 pKa = 10.74AACLGYY315 pKa = 10.88DD316 pKa = 3.74PFNTDD321 pKa = 2.95GALLTPTACSPGGAAPTPGAPVPGAVLPNGNAYY354 pKa = 9.02PADD357 pKa = 3.6GSVPVVVAGSDD368 pKa = 3.42RR369 pKa = 11.84AKK371 pKa = 9.53PAAMAMLAMVLAYY384 pKa = 10.47LL385 pKa = 4.49

Molecular weight: 36.66 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A369HIH9|A0A369HIH9_9HYPO Leucyl-tRNA synthetase OS=Ophiocordyceps camponoti-saundersi (nom. inval.) OX=2039874 GN=CP533_2220 PE=3 SV=1
MM1 pKa = 7.77KK2 pKa = 10.61SPDD5 pKa = 4.19EE6 pKa = 4.36PPQPKK11 pKa = 9.65PKK13 pKa = 10.07NLPWRR18 pKa = 11.84IAADD22 pKa = 4.14TISAAAAASSVAPLIAIIDD41 pKa = 3.65RR42 pKa = 11.84SIMEE46 pKa = 4.36KK47 pKa = 10.57ASGRR51 pKa = 11.84RR52 pKa = 11.84PSLWSSVRR60 pKa = 11.84ASLSSIARR68 pKa = 11.84RR69 pKa = 11.84PHH71 pKa = 5.62TLLFSKK77 pKa = 10.5PSALIFLVYY86 pKa = 10.58GGTYY90 pKa = 8.83LTANAVDD97 pKa = 4.04TVNSAFVEE105 pKa = 4.16PRR107 pKa = 11.84LPPEE111 pKa = 4.47SVSSGPAKK119 pKa = 10.4FFASSAANVGLCLVKK134 pKa = 10.71DD135 pKa = 3.68RR136 pKa = 11.84AFVRR140 pKa = 11.84LFASSTKK147 pKa = 10.34AAVPAPVPLPCYY159 pKa = 10.7ALFTLRR165 pKa = 11.84DD166 pKa = 4.32CITIFASFNLPPRR179 pKa = 11.84LAPYY183 pKa = 10.34LDD185 pKa = 3.72ARR187 pKa = 11.84MPPALADD194 pKa = 4.05FFSGRR199 pKa = 11.84SAAQFLAPAAVQLLSTPLHH218 pKa = 6.15LLGLDD223 pKa = 3.95LYY225 pKa = 10.95ARR227 pKa = 11.84PAPTPPSLRR236 pKa = 11.84WRR238 pKa = 11.84AVCQNWLSSAAARR251 pKa = 11.84ICRR254 pKa = 11.84IVPAFGLGGVINLKK268 pKa = 10.19LRR270 pKa = 11.84RR271 pKa = 11.84HH272 pKa = 5.92LMLTLEE278 pKa = 4.51SSSLSTPSSRR288 pKa = 11.84LASSSS293 pKa = 3.12

Molecular weight: 31.26 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6872

74

6946

3813413

21

4997

549.0

60.55

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.329 ± 0.027

1.304 ± 0.012

6.185 ± 0.024

5.955 ± 0.027

3.485 ± 0.016

6.984 ± 0.034

2.412 ± 0.013

4.129 ± 0.017

4.498 ± 0.025

9.102 ± 0.036

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.232 ± 0.009

3.18 ± 0.015

6.153 ± 0.032

3.965 ± 0.021

7.032 ± 0.026

8.313 ± 0.033

5.511 ± 0.02

6.399 ± 0.022

1.387 ± 0.01

2.445 ± 0.016
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski