Cordyceps confragosa (Lecanicillium lecanii)

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; sordariomyceta; Sordariomycetes; Hypocreomycetidae;

Average proteome isoelectric point is 6.5

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 8125 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A179IFA8|A0A179IFA8_CORDF DNA polymerase kappa OS=Cordyceps confragosa OX=2714763 GN=LLEC1_02068 PE=4 SV=1
MM1 pKa = 7.31EE2 pKa = 4.2QACYY6 pKa = 9.12PAIIDD11 pKa = 4.33LLLSYY16 pKa = 10.72GDD18 pKa = 4.03KK19 pKa = 10.94SILGLGDD26 pKa = 4.93DD27 pKa = 4.26SGQMALHH34 pKa = 6.48YY35 pKa = 9.4AAQMGNTNDD44 pKa = 3.36IQILTDD50 pKa = 3.34KK51 pKa = 11.15GADD54 pKa = 3.46ADD56 pKa = 5.51LIDD59 pKa = 3.58NN60 pKa = 4.91

Molecular weight: 6.4 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A179I5S8|A0A179I5S8_CORDF Uncharacterized protein OS=Cordyceps confragosa OX=2714763 GN=LLEC1_06952 PE=3 SV=1
MM1 pKa = 7.51PFSHH5 pKa = 6.98RR6 pKa = 11.84KK7 pKa = 7.5HH8 pKa = 5.89HH9 pKa = 6.2HH10 pKa = 4.76TTVAAPPKK18 pKa = 9.99RR19 pKa = 11.84RR20 pKa = 11.84GLFSRR25 pKa = 11.84RR26 pKa = 11.84AAHH29 pKa = 6.24HH30 pKa = 6.14HH31 pKa = 5.24TTTTTTTTAAPRR43 pKa = 11.84RR44 pKa = 11.84RR45 pKa = 11.84GLFSRR50 pKa = 11.84RR51 pKa = 11.84PVAQHH56 pKa = 4.68HH57 pKa = 5.91HH58 pKa = 4.66QRR60 pKa = 11.84KK61 pKa = 8.46PSLGDD66 pKa = 3.63KK67 pKa = 10.63ISGALLKK74 pKa = 10.93LRR76 pKa = 11.84GSLTNRR82 pKa = 11.84PGVKK86 pKa = 9.93AAGTRR91 pKa = 11.84RR92 pKa = 11.84MRR94 pKa = 11.84GTDD97 pKa = 2.98GRR99 pKa = 11.84GSHH102 pKa = 6.11HH103 pKa = 7.16HH104 pKa = 5.65YY105 pKa = 10.98

Molecular weight: 11.78 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

8125

0

8125

4131730

40

4965

508.5

56.02

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.405 ± 0.021

1.25 ± 0.011

5.892 ± 0.018

5.909 ± 0.026

3.712 ± 0.014

6.851 ± 0.027

2.407 ± 0.01

4.704 ± 0.016

4.807 ± 0.022

8.893 ± 0.03

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.289 ± 0.011

3.566 ± 0.013

5.76 ± 0.026

4.096 ± 0.019

6.137 ± 0.024

8.075 ± 0.031

5.833 ± 0.015

6.167 ± 0.022

1.418 ± 0.009

2.665 ± 0.013
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski