Mobilisporobacter senegalensis

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Clostridia; Eubacteriales; Lachnospiraceae; Mobilisporobacter

Average proteome isoelectric point is 6.1

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3612 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A3N1XQW1|A0A3N1XQW1_9FIRM Uncharacterized protein OS=Mobilisporobacter senegalensis OX=1329262 GN=EDD66_106179 PE=4 SV=1
MM1 pKa = 7.48AKK3 pKa = 9.04IDD5 pKa = 3.64KK6 pKa = 10.96SMIIADD12 pKa = 4.19ILRR15 pKa = 11.84VDD17 pKa = 3.58QGVVPILLQSGMHH30 pKa = 6.53CLGCPSSQMEE40 pKa = 4.41SLEE43 pKa = 4.26DD44 pKa = 3.1ACMVHH49 pKa = 7.48GIDD52 pKa = 4.29PDD54 pKa = 3.84EE55 pKa = 4.79LVEE58 pKa = 5.24DD59 pKa = 4.34LNNYY63 pKa = 9.71LDD65 pKa = 3.75ATNN68 pKa = 3.84

Molecular weight: 7.42 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A3N1X5V5|A0A3N1X5V5_9FIRM GntR family transcriptional regulator OS=Mobilisporobacter senegalensis OX=1329262 GN=EDD66_11652 PE=4 SV=1
MM1 pKa = 7.67KK2 pKa = 8.72MTFQPKK8 pKa = 8.86KK9 pKa = 8.2RR10 pKa = 11.84SRR12 pKa = 11.84AKK14 pKa = 9.05VHH16 pKa = 5.81GFRR19 pKa = 11.84SRR21 pKa = 11.84MSTANGRR28 pKa = 11.84KK29 pKa = 8.58VLARR33 pKa = 11.84RR34 pKa = 11.84RR35 pKa = 11.84AKK37 pKa = 10.35GRR39 pKa = 11.84NKK41 pKa = 10.44LSAA44 pKa = 3.84

Molecular weight: 5.1 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3612

0

3612

1185076

30

5699

328.1

36.94

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.168 ± 0.04

1.118 ± 0.016

5.634 ± 0.031

7.443 ± 0.053

4.148 ± 0.029

6.685 ± 0.039

1.571 ± 0.018

9.441 ± 0.048

7.786 ± 0.038

8.937 ± 0.049

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.818 ± 0.021

5.683 ± 0.035

3.016 ± 0.025

2.839 ± 0.02

3.545 ± 0.028

6.249 ± 0.037

5.503 ± 0.04

6.31 ± 0.029

0.794 ± 0.014

4.312 ± 0.027
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski