Alternaria alternata virus 1

Taxonomy: Viruses; Riboviria; dsRNA viruses; unclassified dsRNA viruses

Average proteome isoelectric point is 6.11

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    

Protein with the lowest isoelectric point:
>tr|B3IXK4|B3IXK4_9VIRU Uncharacterized protein OS=Alternaria alternata virus 1 OX=483537 PE=4 SV=1
MM1 pKa = 7.64FDD3 pKa = 3.89SFCSFPAFVPFVLDD17 pKa = 3.75DD18 pKa = 3.62FSGRR22 pKa = 11.84VSAPALLTVQATGGMKK38 pKa = 10.33DD39 pKa = 3.38GRR41 pKa = 11.84QMATASIAFSGAVPSVDD58 pKa = 4.93ALDD61 pKa = 5.93DD62 pKa = 3.98DD63 pKa = 4.46TLSCGVGRR71 pKa = 11.84YY72 pKa = 6.97IHH74 pKa = 6.56HH75 pKa = 5.53VHH77 pKa = 5.82VDD79 pKa = 3.27KK80 pKa = 11.67VSFCGGAVCDD90 pKa = 5.81KK91 pKa = 7.39EE92 pKa = 5.09TCCSGCGVSSVRR104 pKa = 11.84PDD106 pKa = 3.32PEE108 pKa = 5.46GGFFSSASLGALVSAGLVEE127 pKa = 5.68AGLEE131 pKa = 4.04DD132 pKa = 3.84EE133 pKa = 4.96RR134 pKa = 11.84CTVMVSFGGLRR145 pKa = 11.84IPLDD149 pKa = 3.33ATGGVVPHH157 pKa = 6.38SRR159 pKa = 11.84ALDD162 pKa = 3.62EE163 pKa = 4.47AALGVFLPPPQTSDD177 pKa = 3.35PGDD180 pKa = 3.23VAVPNEE186 pKa = 4.2PCDD189 pKa = 4.05EE190 pKa = 4.54EE191 pKa = 4.9IKK193 pKa = 10.12TLADD197 pKa = 3.64GLLSHH202 pKa = 6.75AVEE205 pKa = 4.83LGMPEE210 pKa = 3.81QAAEE214 pKa = 4.04ASVVVPLPPPPPDD227 pKa = 4.4PEE229 pKa = 4.68DD230 pKa = 4.03LPGSAMNLGTLGGVLAAIADD250 pKa = 3.87GSLVRR255 pKa = 11.84EE256 pKa = 4.39IKK258 pKa = 9.96TYY260 pKa = 10.76DD261 pKa = 3.34PPAGGFEE268 pKa = 4.41GPRR271 pKa = 11.84SEE273 pKa = 4.18VLEE276 pKa = 5.63RR277 pKa = 11.84RR278 pKa = 11.84LQWLNALGSLSDD290 pKa = 3.24SCYY293 pKa = 11.1SVVADD298 pKa = 3.99AGWYY302 pKa = 9.88RR303 pKa = 11.84LLLPFAHH310 pKa = 6.72WQKK313 pKa = 10.92QLGLLSGRR321 pKa = 11.84EE322 pKa = 3.85MDD324 pKa = 4.67LLLGGLSRR332 pKa = 11.84VKK334 pKa = 10.57DD335 pKa = 3.33PRR337 pKa = 11.84LRR339 pKa = 11.84ADD341 pKa = 3.99RR342 pKa = 11.84YY343 pKa = 9.49LHH345 pKa = 6.35FLRR348 pKa = 11.84TVVGASAGGVGDD360 pKa = 4.34PPWAYY365 pKa = 10.41GSVANFQVGMYY376 pKa = 10.03RR377 pKa = 11.84LLWPARR383 pKa = 11.84GAKK386 pKa = 10.09VGVGTSAA393 pKa = 3.54

Molecular weight:
40.98 kDa
Isoelectric point according different methods:






Protein with the highest isoelectric point:
>tr|B3IXK2|B3IXK2_9VIRU Uncharacterized protein OS=Alternaria alternata virus 1 OX=483537 PE=4 SV=1
MM1 pKa = 7.79RR2 pKa = 11.84SDD4 pKa = 3.25KK5 pKa = 10.83TLLLLGFRR13 pKa = 11.84NAAWLRR19 pKa = 11.84AQGSHH24 pKa = 7.38PDD26 pKa = 3.54LGSIPKK32 pKa = 9.84RR33 pKa = 11.84AFVPEE38 pKa = 4.14PKK40 pKa = 10.35EE41 pKa = 4.08IDD43 pKa = 3.14ACLQGIEE50 pKa = 4.96DD51 pKa = 3.81GWGDD55 pKa = 3.67GAFWCQTVVGSGFPVFFVLSDD76 pKa = 2.89VSRR79 pKa = 11.84NVFCHH84 pKa = 6.02SFAEE88 pKa = 4.36VGGDD92 pKa = 3.35VSVVSFGLTEE102 pKa = 4.26ARR104 pKa = 11.84SQLYY108 pKa = 9.81RR109 pKa = 11.84KK110 pKa = 9.67AQVCVVPKK118 pKa = 10.43ARR120 pKa = 11.84PAVAYY125 pKa = 10.29HH126 pKa = 7.0RR127 pKa = 11.84DD128 pKa = 3.23LSAVARR134 pKa = 11.84VLRR137 pKa = 11.84FGVLNANNKK146 pKa = 9.77LCDD149 pKa = 3.58AYY151 pKa = 9.96TDD153 pKa = 4.46FVRR156 pKa = 11.84SPVARR161 pKa = 11.84TEE163 pKa = 4.25EE164 pKa = 4.04TWGLLGGYY172 pKa = 7.44PWRR175 pKa = 11.84DD176 pKa = 2.8LDD178 pKa = 4.3ALVASSTRR186 pKa = 11.84AEE188 pKa = 4.19YY189 pKa = 10.84DD190 pKa = 2.98RR191 pKa = 11.84DD192 pKa = 3.76ADD194 pKa = 3.89TKK196 pKa = 11.21LVGFLDD202 pKa = 3.87RR203 pKa = 11.84LWGKK207 pKa = 10.27KK208 pKa = 9.17RR209 pKa = 11.84GKK211 pKa = 10.58GLGRR215 pKa = 11.84QDD217 pKa = 2.77KK218 pKa = 8.97KK219 pKa = 9.6TRR221 pKa = 11.84AKK223 pKa = 10.85AAMAWGDD230 pKa = 3.44ANLWTRR236 pKa = 11.84EE237 pKa = 3.74VSFKK241 pKa = 10.38RR242 pKa = 11.84RR243 pKa = 11.84HH244 pKa = 5.69YY245 pKa = 10.67YY246 pKa = 10.68DD247 pKa = 4.23LATFLCTMDD256 pKa = 4.49EE257 pKa = 4.33VWGDD261 pKa = 3.31RR262 pKa = 11.84AVAMQGGATSKK273 pKa = 10.63EE274 pKa = 3.62ADD276 pKa = 3.77VQCLSFRR283 pKa = 11.84KK284 pKa = 9.21AVRR287 pKa = 11.84MVLSDD292 pKa = 5.16LIFGPATYY300 pKa = 10.34EE301 pKa = 3.89RR302 pKa = 11.84IYY304 pKa = 10.6LTVFWIFSTRR314 pKa = 11.84WWPSLVPVLLHH325 pKa = 6.46FGSLGMSDD333 pKa = 4.82DD334 pKa = 4.62EE335 pKa = 4.3YY336 pKa = 10.28TAVHH340 pKa = 6.64KK341 pKa = 10.87EE342 pKa = 3.63MTAVVTSTWMVPGTCRR358 pKa = 11.84QHH360 pKa = 5.91QFSANFLNAEE370 pKa = 4.57DD371 pKa = 3.7LTGWSDD377 pKa = 3.47RR378 pKa = 11.84DD379 pKa = 3.67SLKK382 pKa = 11.19GGVCAEE388 pKa = 4.17IIKK391 pKa = 10.21FALATFEE398 pKa = 4.31YY399 pKa = 10.31KK400 pKa = 10.58ADD402 pKa = 3.56VRR404 pKa = 11.84DD405 pKa = 3.86GGGEE409 pKa = 3.63AGIPIRR415 pKa = 11.84GKK417 pKa = 9.45EE418 pKa = 4.13GSPEE422 pKa = 4.05EE423 pKa = 3.83YY424 pKa = 10.18LGRR427 pKa = 11.84YY428 pKa = 7.56RR429 pKa = 11.84QAMYY433 pKa = 11.15DD434 pKa = 3.78LLRR437 pKa = 11.84PMYY440 pKa = 10.62ARR442 pKa = 11.84YY443 pKa = 9.3APNMVDD449 pKa = 4.04LQAHH453 pKa = 5.06MEE455 pKa = 4.09KK456 pKa = 10.51RR457 pKa = 11.84MAWMSGGAVGRR468 pKa = 11.84RR469 pKa = 11.84AKK471 pKa = 10.32EE472 pKa = 3.52LLGPGIAPPGSSKK485 pKa = 11.07AYY487 pKa = 8.2VAARR491 pKa = 11.84ADD493 pKa = 3.44ISQLTRR499 pKa = 11.84DD500 pKa = 3.45WGEE503 pKa = 3.46MRR505 pKa = 11.84IEE507 pKa = 3.98VGGKK511 pKa = 8.57GNEE514 pKa = 4.03RR515 pKa = 11.84GSEE518 pKa = 3.96RR519 pKa = 11.84TLLATDD525 pKa = 4.29LRR527 pKa = 11.84DD528 pKa = 3.66QVSEE532 pKa = 4.39SYY534 pKa = 10.83LLHH537 pKa = 6.56AFKK540 pKa = 10.77NRR542 pKa = 11.84YY543 pKa = 8.45GLIGVDD549 pKa = 3.33VGEE552 pKa = 4.82TPVEE556 pKa = 3.84MFKK559 pKa = 10.72RR560 pKa = 11.84HH561 pKa = 4.39VTVASATDD569 pKa = 3.55VPLVHH574 pKa = 7.01HH575 pKa = 6.63GRR577 pKa = 11.84DD578 pKa = 3.6KK579 pKa = 11.13KK580 pKa = 11.24VLAAWDD586 pKa = 3.71YY587 pKa = 11.34SKK589 pKa = 10.67WDD591 pKa = 3.49HH592 pKa = 6.43HH593 pKa = 7.34VMLAEE598 pKa = 3.87RR599 pKa = 11.84LILVEE604 pKa = 4.05VMRR607 pKa = 11.84KK608 pKa = 9.16LVLEE612 pKa = 4.64FVQRR616 pKa = 11.84PDD618 pKa = 2.94VRR620 pKa = 11.84EE621 pKa = 3.93DD622 pKa = 3.16MLRR625 pKa = 11.84EE626 pKa = 4.07LEE628 pKa = 4.24VLEE631 pKa = 4.53SSHH634 pKa = 5.59RR635 pKa = 11.84TAIYY639 pKa = 9.98RR640 pKa = 11.84SRR642 pKa = 11.84AFADD646 pKa = 3.29AKK648 pKa = 10.45YY649 pKa = 8.83TDD651 pKa = 3.93QVDD654 pKa = 3.47SLIRR658 pKa = 11.84EE659 pKa = 4.26GVAAGFKK666 pKa = 11.11GEE668 pKa = 4.05VQRR671 pKa = 11.84LSADD675 pKa = 3.18QVRR678 pKa = 11.84ITNYY682 pKa = 10.27AGQQSGRR689 pKa = 11.84RR690 pKa = 11.84STLEE694 pKa = 3.6SNTFYY699 pKa = 11.23SRR701 pKa = 11.84ARR703 pKa = 11.84LLVRR707 pKa = 11.84DD708 pKa = 4.43AEE710 pKa = 4.25LLDD713 pKa = 3.93AEE715 pKa = 4.32RR716 pKa = 11.84SIYY719 pKa = 10.45LLNRR723 pKa = 11.84ADD725 pKa = 5.03DD726 pKa = 3.46VMEE729 pKa = 4.91IYY731 pKa = 10.32RR732 pKa = 11.84AWEE735 pKa = 3.72HH736 pKa = 6.0ARR738 pKa = 11.84NAIDD742 pKa = 4.24VMLLQGHH749 pKa = 6.65KK750 pKa = 10.49ANKK753 pKa = 8.77KK754 pKa = 7.94KK755 pKa = 10.5QVVQVRR761 pKa = 11.84TGVYY765 pKa = 10.09FRR767 pKa = 11.84ILYY770 pKa = 10.65ANGSMRR776 pKa = 11.84GFPPRR781 pKa = 11.84AVYY784 pKa = 10.5ACASAGPSMAASGGFDD800 pKa = 3.15PVEE803 pKa = 4.21RR804 pKa = 11.84LSSLSGALDD813 pKa = 3.24RR814 pKa = 11.84LARR817 pKa = 11.84RR818 pKa = 11.84GSGYY822 pKa = 10.04YY823 pKa = 9.13VARR826 pKa = 11.84ALYY829 pKa = 10.21FEE831 pKa = 5.3AEE833 pKa = 4.12DD834 pKa = 4.07YY835 pKa = 11.05YY836 pKa = 11.5RR837 pKa = 11.84DD838 pKa = 3.68VRR840 pKa = 11.84VQLAAKK846 pKa = 9.07ADD848 pKa = 3.37KK849 pKa = 9.23YY850 pKa = 9.85TRR852 pKa = 11.84FTIPRR857 pKa = 11.84EE858 pKa = 4.02VLRR861 pKa = 11.84ASPDD865 pKa = 3.31LGGCGVLPPGCYY877 pKa = 10.06DD878 pKa = 3.27YY879 pKa = 11.01DD880 pKa = 3.96YY881 pKa = 10.9TIKK884 pKa = 10.55CSNIKK889 pKa = 10.29GPNEE893 pKa = 3.86QLWQAIRR900 pKa = 11.84EE901 pKa = 4.17RR902 pKa = 11.84LEE904 pKa = 3.71KK905 pKa = 9.87RR906 pKa = 11.84HH907 pKa = 5.91KK908 pKa = 10.51FRR910 pKa = 11.84GLADD914 pKa = 3.78LQGSAGRR921 pKa = 11.84AFAHH925 pKa = 6.45DD926 pKa = 4.12VPLEE930 pKa = 4.2VPDD933 pKa = 5.07KK934 pKa = 11.09AWQQWSKK941 pKa = 9.4RR942 pKa = 11.84WRR944 pKa = 11.84GDD946 pKa = 2.74RR947 pKa = 11.84AAQDD951 pKa = 3.45GRR953 pKa = 11.84GEE955 pKa = 4.13LLRR958 pKa = 11.84AKK960 pKa = 9.88MMAKK964 pKa = 9.41LWRR967 pKa = 11.84YY968 pKa = 8.01KK969 pKa = 10.53RR970 pKa = 11.84SWHH973 pKa = 6.39RR974 pKa = 11.84DD975 pKa = 3.0KK976 pKa = 11.52KK977 pKa = 10.29GDD979 pKa = 3.28TWGLEE984 pKa = 4.36GFGHH988 pKa = 7.59LLSLPVDD995 pKa = 4.39FFNIAWRR1002 pKa = 11.84MLRR1005 pKa = 11.84DD1006 pKa = 3.69CPGTGEE1012 pKa = 4.34VDD1014 pKa = 3.37RR1015 pKa = 11.84LMKK1018 pKa = 10.44GVQGPPAEE1026 pKa = 4.31GMLAKK1031 pKa = 10.37LWYY1034 pKa = 10.47GLGQDD1039 pKa = 4.1VISVLGRR1046 pKa = 11.84DD1047 pKa = 3.64VLEE1050 pKa = 4.88VIQSASAPGRR1060 pKa = 11.84EE1061 pKa = 4.98FAAEE1065 pKa = 4.12WGWLPLDD1072 pKa = 3.56VRR1074 pKa = 11.84EE1075 pKa = 4.15KK1076 pKa = 10.64FLRR1079 pKa = 11.84GHH1081 pKa = 7.52LGPAGAWMNLIPASFAPWLNQAVNFVLFQAFATGVRR1117 pKa = 11.84YY1118 pKa = 9.9RR1119 pKa = 11.84GSHH1122 pKa = 5.45WLLCVRR1128 pKa = 11.84QAITGAISRR1137 pKa = 11.84QFVNSRR1143 pKa = 11.84PWLMLHH1149 pKa = 7.02

Molecular weight:
129.34 kDa
Isoelectric point according different methods:






Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4

0

4

3145

393

1149

786.3

85.79

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

10.493 ± 0.367

1.304 ± 0.229

6.9 ± 0.328

5.024 ± 0.163

3.688 ± 0.217

10.588 ± 0.771

2.194 ± 0.112

2.13 ± 0.298

3.084 ± 0.663

9.507 ± 0.816

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.289 ± 0.135

1.653 ± 0.322

5.215 ± 0.842

2.576 ± 0.289

8.172 ± 0.628

6.709 ± 0.432

3.847 ± 0.252

9.253 ± 0.565

2.448 ± 0.275

2.925 ± 0.334

Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski