Arthrobotrys flagrans

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; Orbiliomycetes; Orbiliales; Orbiliaceae; Arthrobotrys

Average proteome isoelectric point is 6.56

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 10325 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A437A4J4|A0A437A4J4_9PEZI Uncharacterized protein OS=Arthrobotrys flagrans OX=97331 GN=DFL_004315 PE=4 SV=1
MM1 pKa = 7.75RR2 pKa = 11.84FSTLAFAAIAVLPSAISAFSLYY24 pKa = 10.49DD25 pKa = 3.29ISSDD29 pKa = 4.89LGDD32 pKa = 5.19ANDD35 pKa = 4.09KK36 pKa = 10.77CASQYY41 pKa = 10.89SIPLMSCGFLPGKK54 pKa = 10.49CSDD57 pKa = 3.46ACQEE61 pKa = 4.04QLQSLEE67 pKa = 4.05TTLQGVCKK75 pKa = 10.27DD76 pKa = 3.44SKK78 pKa = 11.06KK79 pKa = 10.29PQNLLLAALNDD90 pKa = 3.86GLVPALCVNAASSGSSSSSGSDD112 pKa = 3.32DD113 pKa = 3.82TPSATPTFMSGPGKK127 pKa = 8.92TPSSSAAQLTFSGVVEE143 pKa = 4.2ATSATEE149 pKa = 4.11DD150 pKa = 3.42QSEE153 pKa = 4.31PTGLVIDD160 pKa = 4.08TSVPEE165 pKa = 4.13TTATQTVAYY174 pKa = 8.89PEE176 pKa = 3.96NTYY179 pKa = 11.33APTTLQTSNSPASTTSSSSEE199 pKa = 3.65GSGNGGSNGSPFSSQDD215 pKa = 3.39DD216 pKa = 4.12NPNSGAAVRR225 pKa = 11.84VSAFGVAIGVFALIANIAA243 pKa = 3.37

Molecular weight: 24.37 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A436ZY54|A0A436ZY54_9PEZI Uncharacterized protein OS=Arthrobotrys flagrans OX=97331 GN=DFL_005670 PE=4 SV=1
MM1 pKa = 7.29TVLTLLRR8 pKa = 11.84RR9 pKa = 11.84PAVSCLRR16 pKa = 11.84SSSSLLSSTSRR27 pKa = 11.84RR28 pKa = 11.84TFTSLLRR35 pKa = 11.84TPTALATLQTRR46 pKa = 11.84PTPSTPTPLLPQTISPLLPSASTSLQGLVQTRR78 pKa = 11.84GHH80 pKa = 6.2RR81 pKa = 11.84RR82 pKa = 11.84KK83 pKa = 8.38TYY85 pKa = 8.98NPSHH89 pKa = 7.03IVRR92 pKa = 11.84KK93 pKa = 9.74RR94 pKa = 11.84RR95 pKa = 11.84FGFLARR101 pKa = 11.84LRR103 pKa = 11.84SKK105 pKa = 9.3TGKK108 pKa = 10.27NILKK112 pKa = 9.96RR113 pKa = 11.84RR114 pKa = 11.84KK115 pKa = 9.1AKK117 pKa = 8.97GRR119 pKa = 11.84KK120 pKa = 8.03MLTHH124 pKa = 7.27

Molecular weight: 13.87 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

9880

445

10325

5006540

66

12066

484.9

53.76

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.793 ± 0.022

1.157 ± 0.01

5.594 ± 0.016

6.648 ± 0.03

3.679 ± 0.015

6.864 ± 0.023

2.2 ± 0.011

5.275 ± 0.016

5.602 ± 0.025

8.489 ± 0.024

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.039 ± 0.009

3.979 ± 0.012

6.282 ± 0.035

3.789 ± 0.02

5.866 ± 0.022

8.247 ± 0.027

6.329 ± 0.02

5.979 ± 0.019

1.321 ± 0.009

2.868 ± 0.014
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski