Moraxella lincolnii

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Moraxella

Average proteome isoelectric point is 6.48

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1751 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1T0CF43|A0A1T0CF43_9GAMM Osmotically inducible protein OsmC OS=Moraxella lincolnii OX=90241 GN=B0682_05245 PE=3 SV=1
MM1 pKa = 7.52KK2 pKa = 9.8LKK4 pKa = 10.76SSIVFAMLTLLSLTACDD21 pKa = 4.66NSNKK25 pKa = 10.22SNADD29 pKa = 3.32QSSTTQQATHH39 pKa = 6.69EE40 pKa = 4.36EE41 pKa = 4.4ASTQAVEE48 pKa = 4.26QPIIDD53 pKa = 3.97STDD56 pKa = 3.3DD57 pKa = 3.51AVADD61 pKa = 5.17PIDD64 pKa = 5.47DD65 pKa = 4.19GQQPEE70 pKa = 4.41VTVTDD75 pKa = 4.28GVGVLPQSAYY85 pKa = 11.09SGVLPCADD93 pKa = 3.58CSGIQTDD100 pKa = 4.04LTLNADD106 pKa = 3.55GTFVMEE112 pKa = 4.33QEE114 pKa = 4.43YY115 pKa = 10.68LGKK118 pKa = 9.45PDD120 pKa = 3.76GQITTKK126 pKa = 9.35GTYY129 pKa = 9.81DD130 pKa = 3.29INGLDD135 pKa = 3.23SRR137 pKa = 11.84YY138 pKa = 10.49VLLHH142 pKa = 6.99PEE144 pKa = 4.53DD145 pKa = 4.08QSDD148 pKa = 3.55IPPYY152 pKa = 10.03LIYY155 pKa = 9.65MDD157 pKa = 4.29KK158 pKa = 11.16DD159 pKa = 3.62SVQFRR164 pKa = 11.84DD165 pKa = 3.32IEE167 pKa = 4.37NGEE170 pKa = 4.32EE171 pKa = 3.98PSPDD175 pKa = 2.93HH176 pKa = 6.13TLNLVSS182 pKa = 4.37

Molecular weight: 19.65 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1T0CJP7|A0A1T0CJP7_9GAMM Phospho-N-acetylmuramoyl-pentapeptide-transferase OS=Moraxella lincolnii OX=90241 GN=mraY PE=3 SV=1
MM1 pKa = 7.45KK2 pKa = 9.53RR3 pKa = 11.84TFQPSIIKK11 pKa = 10.36RR12 pKa = 11.84KK13 pKa = 7.45RR14 pKa = 11.84THH16 pKa = 5.93GFRR19 pKa = 11.84ARR21 pKa = 11.84MATKK25 pKa = 10.32KK26 pKa = 10.31GRR28 pKa = 11.84QVLARR33 pKa = 11.84RR34 pKa = 11.84RR35 pKa = 11.84AKK37 pKa = 10.03GRR39 pKa = 11.84HH40 pKa = 5.34RR41 pKa = 11.84LTVV44 pKa = 3.07

Molecular weight: 5.29 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1751

0

1751

579145

26

2452

330.8

36.78

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.466 ± 0.063

0.921 ± 0.019

6.181 ± 0.054

4.656 ± 0.056

3.685 ± 0.038

6.541 ± 0.058

2.914 ± 0.037

6.499 ± 0.042

5.541 ± 0.051

10.179 ± 0.075

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.85 ± 0.031

5.017 ± 0.053

3.962 ± 0.034

5.607 ± 0.067

4.168 ± 0.045

6.054 ± 0.04

5.944 ± 0.039

6.672 ± 0.052

1.158 ± 0.025

2.986 ± 0.036
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski