Dragonfly larvae associated circular virus-1

Taxonomy: Viruses; unclassified viruses; unclassified DNA viruses; unclassified ssDNA viruses

Average proteome isoelectric point is 8.06

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|W5U268|W5U268_9VIRU ATP-dependent helicase Rep OS=Dragonfly larvae associated circular virus-1 OX=1454021 PE=3 SV=1
MM1 pKa = 7.79PLSDD5 pKa = 4.51HH6 pKa = 7.2RR7 pKa = 11.84SPAPGSRR14 pKa = 11.84LSVRR18 pKa = 11.84RR19 pKa = 11.84QGIFWMLTIPHH30 pKa = 6.75HH31 pKa = 6.68CFTPYY36 pKa = 10.62LPPGCVWIRR45 pKa = 11.84GQHH48 pKa = 5.08EE49 pKa = 4.62LSLSGYY55 pKa = 6.95SHH57 pKa = 6.18WQILVAMSTKK67 pKa = 10.55SSLAQVKK74 pKa = 10.04SVFGEE79 pKa = 3.93QCHH82 pKa = 6.35AEE84 pKa = 4.15LSRR87 pKa = 11.84SEE89 pKa = 4.24SAQDD93 pKa = 3.78YY94 pKa = 8.97VWKK97 pKa = 10.35EE98 pKa = 3.95DD99 pKa = 3.43TRR101 pKa = 11.84VDD103 pKa = 3.55CSQFEE108 pKa = 4.47FGSKK112 pKa = 9.95PIRR115 pKa = 11.84RR116 pKa = 11.84NSRR119 pKa = 11.84VDD121 pKa = 3.23WEE123 pKa = 4.97SVWSAAKK130 pKa = 10.59SGDD133 pKa = 3.72LLQIPANVRR142 pKa = 11.84VVSYY146 pKa = 8.57RR147 pKa = 11.84TLRR150 pKa = 11.84AIKK153 pKa = 10.08ADD155 pKa = 3.72YY156 pKa = 9.16EE157 pKa = 4.81VPQSMEE163 pKa = 3.94RR164 pKa = 11.84TALCYY169 pKa = 9.29WGPTGTGKK177 pKa = 10.08SLRR180 pKa = 11.84SSRR183 pKa = 11.84EE184 pKa = 3.7AGIDD188 pKa = 3.46AYY190 pKa = 11.5YY191 pKa = 10.71KK192 pKa = 10.52DD193 pKa = 3.98PRR195 pKa = 11.84TKK197 pKa = 10.0FWCGYY202 pKa = 9.47RR203 pKa = 11.84GQQHH207 pKa = 6.08VIVDD211 pKa = 4.07EE212 pKa = 4.14FRR214 pKa = 11.84GAIDD218 pKa = 3.24ISHH221 pKa = 7.84LLRR224 pKa = 11.84WLDD227 pKa = 3.73RR228 pKa = 11.84YY229 pKa = 10.14PCYY232 pKa = 10.82LEE234 pKa = 4.38TKK236 pKa = 10.31GSSTSNCVTKK246 pKa = 10.42FWFTSNLHH254 pKa = 6.18PDD256 pKa = 3.67FWYY259 pKa = 10.14PDD261 pKa = 3.66LDD263 pKa = 3.77EE264 pKa = 4.57LTRR267 pKa = 11.84LALIRR272 pKa = 11.84RR273 pKa = 11.84ISVLEE278 pKa = 3.67ITEE281 pKa = 5.04LDD283 pKa = 3.57TSLLPP288 pKa = 4.48

Molecular weight: 33.14 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|W5U268|W5U268_9VIRU ATP-dependent helicase Rep OS=Dragonfly larvae associated circular virus-1 OX=1454021 PE=3 SV=1
MM1 pKa = 7.38TRR3 pKa = 11.84TFNYY7 pKa = 8.73GHH9 pKa = 7.55PLRR12 pKa = 11.84VVGTIAANQFYY23 pKa = 10.73NKK25 pKa = 10.1YY26 pKa = 8.3IAPWKK31 pKa = 9.88DD32 pKa = 3.01RR33 pKa = 11.84KK34 pKa = 10.57HH35 pKa = 6.47PDD37 pKa = 2.65WLSYY41 pKa = 10.92KK42 pKa = 10.1PIDD45 pKa = 3.47YY46 pKa = 10.91SSIYY50 pKa = 10.39KK51 pKa = 9.31PDD53 pKa = 4.14HH54 pKa = 6.17GSKK57 pKa = 10.34PLPKK61 pKa = 9.97KK62 pKa = 10.59KK63 pKa = 9.92EE64 pKa = 4.01STMGAEE70 pKa = 5.17DD71 pKa = 3.52IPIGVKK77 pKa = 10.12KK78 pKa = 10.6NVVSVHH84 pKa = 5.91TGLKK88 pKa = 9.45RR89 pKa = 11.84LKK91 pKa = 10.82GMVAGHH97 pKa = 6.17ISYY100 pKa = 10.38RR101 pKa = 11.84DD102 pKa = 3.55SYY104 pKa = 10.72PALLVCDD111 pKa = 4.12EE112 pKa = 5.08GYY114 pKa = 11.18QNVTAPVYY122 pKa = 10.55IGTTSQFLTATSNGVASNRR141 pKa = 11.84DD142 pKa = 3.59SVSYY146 pKa = 10.97ASWFALNPEE155 pKa = 3.96QGIAAGSIISANTAPACDD173 pKa = 4.11KK174 pKa = 10.9IGLQSSTTYY183 pKa = 11.33LDD185 pKa = 3.9FKK187 pKa = 11.42NDD189 pKa = 3.52TTNICYY195 pKa = 10.22YY196 pKa = 10.17KK197 pKa = 10.0VHH199 pKa = 8.01IYY201 pKa = 7.98MAKK204 pKa = 8.86TDD206 pKa = 3.74TNQTVLSEE214 pKa = 4.5FNNSTGSDD222 pKa = 2.96NLYY225 pKa = 10.69NSNFAYY231 pKa = 8.55GTGVGTVLPATSGNEE246 pKa = 3.59QTNAYY251 pKa = 8.25IASSTSQIEE260 pKa = 4.45SCNMLPYY267 pKa = 10.32TKK269 pKa = 9.69ISSKK273 pKa = 10.59RR274 pKa = 11.84LVRR277 pKa = 11.84SVWKK281 pKa = 10.03KK282 pKa = 9.87IKK284 pKa = 9.58TISHH288 pKa = 5.74VFSGGDD294 pKa = 2.94AWKK297 pKa = 10.5LIVNIKK303 pKa = 10.05HH304 pKa = 5.35NQFGLRR310 pKa = 11.84EE311 pKa = 3.99RR312 pKa = 11.84LNTLSVVFPKK322 pKa = 10.96GCVCFLFEE330 pKa = 4.2MQGGTVYY337 pKa = 9.51NTANSAFGYY346 pKa = 8.2SACQMAVNITRR357 pKa = 11.84KK358 pKa = 9.08IHH360 pKa = 6.35LSPMAIPNKK369 pKa = 9.43RR370 pKa = 11.84FEE372 pKa = 4.1SRR374 pKa = 11.84YY375 pKa = 8.87VGAGRR380 pKa = 11.84EE381 pKa = 4.11FQGALLGTEE390 pKa = 3.7KK391 pKa = 10.81DD392 pKa = 3.59LYY394 pKa = 11.26HH395 pKa = 5.62NTEE398 pKa = 3.99VGAVPAKK405 pKa = 10.29IVV407 pKa = 3.05

Molecular weight: 44.8 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

695

288

407

347.5

38.97

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.619 ± 0.868

2.158 ± 0.381

4.46 ± 0.674

4.029 ± 0.726

3.597 ± 0.077

6.763 ± 0.743

2.734 ± 0.241

5.612 ± 0.462

5.755 ± 1.191

7.482 ± 1.165

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.727 ± 0.208

4.604 ± 1.978

4.892 ± 0.408

3.309 ± 0.314

5.468 ± 1.763

9.928 ± 0.728

6.906 ± 0.831

6.619 ± 0.44

2.302 ± 0.933

5.036 ± 0.535
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski