Microlunatus sp. Gsoil 973
Average proteome isoelectric point is 6.37
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 4311 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|A0A6I5VNC4|A0A6I5VNC4_9ACTN DUF4097 family beta strand repeat protein OS=Microlunatus sp. Gsoil 973 OX=2672569 GN=GJV80_19935 PE=4 SV=1
MM1 pKa = 7.53 EE2 pKa = 5.73 SIATASFTPPPRR14 pKa = 11.84 AGSYY18 pKa = 7.11 YY19 pKa = 9.62 WRR21 pKa = 11.84 VSYY24 pKa = 11.04 SGDD27 pKa = 3.57 DD28 pKa = 3.51 NYY30 pKa = 11.28 TALPQSPCGEE40 pKa = 4.25 AGEE43 pKa = 4.61 TSTVTPAVPTIATQATTATLPNASVSDD70 pKa = 3.79 TATVTGIPDD79 pKa = 3.43 APIPTGTVTFRR90 pKa = 11.84 LYY92 pKa = 10.59 GASGTPVCTGDD103 pKa = 3.71 PAFGPATVPLTDD115 pKa = 3.72 GTATSPEE122 pKa = 4.11 FSPTVAGDD130 pKa = 3.61 YY131 pKa = 10.26 FWLVDD136 pKa = 3.37 YY137 pKa = 11.41 SGDD140 pKa = 3.55 ANYY143 pKa = 10.71 EE144 pKa = 4.27 PVTSTCDD151 pKa = 3.44 DD152 pKa = 4.12 PNEE155 pKa = 4.0 KK156 pKa = 10.55 SRR158 pKa = 11.84 ITKK161 pKa = 10.25 SAVLLTSSAADD172 pKa = 3.16 ARR174 pKa = 11.84 FGDD177 pKa = 4.58 EE178 pKa = 4.66 ISDD181 pKa = 3.5 TGLLVGVGDD190 pKa = 3.95 VAPTGTVTFTAYY202 pKa = 10.47 GPTDD206 pKa = 3.31 SDD208 pKa = 3.69 EE209 pKa = 4.4 PVCEE213 pKa = 4.24 DD214 pKa = 3.89 VAFAQAGTDD223 pKa = 3.66 LQTTSPGTATADD235 pKa = 3.34 ASFTPSDD242 pKa = 3.36 PGRR245 pKa = 11.84 YY246 pKa = 7.42 FWRR249 pKa = 11.84 ISYY252 pKa = 10.53 SGDD255 pKa = 3.1 SNYY258 pKa = 9.99 VDD260 pKa = 3.54 TVSDD264 pKa = 3.88 CGALDD269 pKa = 3.45 EE270 pKa = 4.58 EE271 pKa = 4.99 SRR273 pKa = 11.84 VTVPSIDD280 pKa = 3.27 IAKK283 pKa = 8.47 TATPDD288 pKa = 3.32 SFGSADD294 pKa = 3.93 SPITYY299 pKa = 10.13 NYY301 pKa = 10.44 RR302 pKa = 11.84 VTNTGDD308 pKa = 3.15 ATLDD312 pKa = 3.49 NVRR315 pKa = 11.84 VTDD318 pKa = 3.63 PHH320 pKa = 7.25 DD321 pKa = 4.1 GLSEE325 pKa = 4.03 LACAPAQGSSLDD337 pKa = 3.84 PGDD340 pKa = 4.64 VMTCTAVYY348 pKa = 8.28 ATTQADD354 pKa = 4.11 LNAGSITNTATVTGTPPTGADD375 pKa = 3.35 VTDD378 pKa = 3.47 TDD380 pKa = 3.98 QAVVTANQGPDD391 pKa = 2.83 IQIAKK396 pKa = 9.15 NASPGSFGAAGTPITYY412 pKa = 10.05 SYY414 pKa = 11.32 QVTNTGNVTLDD425 pKa = 3.7 DD426 pKa = 3.87 VRR428 pKa = 11.84 VTDD431 pKa = 3.47 PHH433 pKa = 7.47 VGLSAVSCAPAQGSSLDD450 pKa = 3.84 PGDD453 pKa = 4.64 VMTCTAVYY461 pKa = 7.42 TTTQADD467 pKa = 4.07 LNAGSITNTATVTGTPPTGADD488 pKa = 3.35 VTDD491 pKa = 3.47 TDD493 pKa = 3.98 QAVVTANQGPDD504 pKa = 2.83 IQIAKK509 pKa = 9.15 NASPGSFGAAGTPITYY525 pKa = 10.05 SYY527 pKa = 11.32 QVTNTGNVTLNNVRR541 pKa = 11.84 VTDD544 pKa = 3.82 PHH546 pKa = 7.44 DD547 pKa = 4.11 GLSDD551 pKa = 3.93 LACAPNQGTSLDD563 pKa = 4.05 PGDD566 pKa = 4.83 VMTCTAVYY574 pKa = 7.57 TTTQDD579 pKa = 3.54 DD580 pKa = 4.43 LNAGSITDD588 pKa = 3.61 TATATGVSVAGDD600 pKa = 3.46 NVLDD604 pKa = 3.85 SDD606 pKa = 4.28 EE607 pKa = 4.9 ALVTASTAPAIDD619 pKa = 3.48 IQKK622 pKa = 8.59 TADD625 pKa = 3.34 PTEE628 pKa = 4.56 FGTAGTPITYY638 pKa = 8.82 TYY640 pKa = 11.11 QVTNTGNVTLDD651 pKa = 3.7 DD652 pKa = 3.87 VRR654 pKa = 11.84 VTDD657 pKa = 3.47 PHH659 pKa = 7.47 VGLSAVSCAPAQGATLEE676 pKa = 5.19 PGDD679 pKa = 4.98 QMDD682 pKa = 3.92 CTAVYY687 pKa = 7.57 TTTQGDD693 pKa = 4.24 LNSGSVTDD701 pKa = 3.6 TATVVGSPPTGSNVTDD717 pKa = 3.41 TDD719 pKa = 3.48 QALITANQGPAIQIAKK735 pKa = 8.37 TVAPDD740 pKa = 3.21 TFGAVGTPITYY751 pKa = 10.15 SYY753 pKa = 11.32 QVTNTGNVTLNDD765 pKa = 3.66 VQVTDD770 pKa = 3.84 PHH772 pKa = 7.18 DD773 pKa = 4.1 GLSTISCSPSQGSSLDD789 pKa = 3.42 PGSAMSCTASYY800 pKa = 11.11 SATQADD806 pKa = 4.77 LNIGSITDD814 pKa = 3.4 TATVVGSPPTGPNVTDD830 pKa = 3.23 SDD832 pKa = 4.04 QALVTATTAPAIDD845 pKa = 3.64 IQKK848 pKa = 10.04 SAEE851 pKa = 3.94 PTEE854 pKa = 4.63 FSAAGTPIAYY864 pKa = 8.41 TFVVTNTGNVTLDD877 pKa = 3.53 NVDD880 pKa = 3.24 VTDD883 pKa = 4.87 PLDD886 pKa = 3.79 GLTPIACDD894 pKa = 3.28 PAQGVSLDD902 pKa = 4.45 PGDD905 pKa = 5.11 QMTCTAGYY913 pKa = 6.54 TTTQADD919 pKa = 4.25 LNRR922 pKa = 11.84 GDD924 pKa = 3.82 IANTATVVGVPPAGPNVSDD943 pKa = 5.07 SDD945 pKa = 3.84 QQLITANQGPEE956 pKa = 3.59 IQITKK961 pKa = 9.95 IADD964 pKa = 3.36 PTEE967 pKa = 4.51 FGSAGTPITYY977 pKa = 8.61 TYY979 pKa = 11.53 RR980 pKa = 11.84 MINTGNVTVDD990 pKa = 3.69 DD991 pKa = 4.01 VRR993 pKa = 11.84 ITDD996 pKa = 3.55 PHH998 pKa = 7.46 SGLSAISCAPAQGASLDD1015 pKa = 4.46 PGDD1018 pKa = 5.41 QMDD1021 pKa = 4.05 CTAVYY1026 pKa = 7.57 TTTQTDD1032 pKa = 3.48 VNRR1035 pKa = 11.84 GEE1037 pKa = 4.28 IVNTATVTGTSPAGDD1052 pKa = 3.49 VTDD1055 pKa = 3.76 TDD1057 pKa = 4.17 TALVTADD1064 pKa = 3.46 QGPNITVTKK1073 pKa = 10.21 IADD1076 pKa = 3.49 PTEE1079 pKa = 4.42 FGSAGTVINYY1089 pKa = 9.53 GYY1091 pKa = 11.16 LVTNNGNVTLDD1102 pKa = 3.82 DD1103 pKa = 3.82 VRR1105 pKa = 11.84 VTDD1108 pKa = 4.03 PQVGLSAVSCAPAQGASLAPGDD1130 pKa = 4.25 TMSCTARR1137 pKa = 11.84 YY1138 pKa = 6.14 TTTQADD1144 pKa = 4.17 LNAGLITNIGTVTGTPPTGPAVSDD1168 pKa = 3.57 SDD1170 pKa = 4.27 DD1171 pKa = 3.71 AAVTANQVPAITISKK1186 pKa = 9.63 IADD1189 pKa = 3.54 PAEE1192 pKa = 4.44 FGAAGTPITYY1202 pKa = 8.79 TYY1204 pKa = 11.02 RR1205 pKa = 11.84 VTNTGNVTLDD1215 pKa = 3.7 DD1216 pKa = 3.87 VRR1218 pKa = 11.84 VTDD1221 pKa = 3.47 PHH1223 pKa = 7.47 VGLSAVSCAPAQGATLEE1240 pKa = 5.19 PGDD1243 pKa = 5.31 QMDD1246 pKa = 3.87 CTAAYY1251 pKa = 6.89 TTTQADD1257 pKa = 4.23 LNSGSVTNTATVVGQPPTGPNVTDD1281 pKa = 3.39 TDD1283 pKa = 3.68 QALITANQGPNIQIIKK1299 pKa = 9.21 IAEE1302 pKa = 4.18 PEE1304 pKa = 4.36 TFGSAGTPITYY1315 pKa = 10.03 SYY1317 pKa = 11.32 QVTNTGNVTLDD1328 pKa = 3.7 DD1329 pKa = 3.87 VRR1331 pKa = 11.84 VTDD1334 pKa = 3.47 PHH1336 pKa = 7.47 VGLSAVSCAPAQGSTLDD1353 pKa = 4.66 PGDD1356 pKa = 3.52 QMDD1359 pKa = 4.7 CIGRR1363 pKa = 11.84 YY1364 pKa = 6.44 TTTQSDD1370 pKa = 4.18 LNAGSVTDD1378 pKa = 3.65 TATVTGEE1385 pKa = 4.24 PPTGNAVTDD1394 pKa = 3.6 SDD1396 pKa = 4.24 QALITANQGPAITIQKK1412 pKa = 6.97 TANPTEE1418 pKa = 4.48 FGAAGTPITYY1428 pKa = 8.87 TYY1430 pKa = 11.11 QVTNTGNVTLDD1441 pKa = 3.7 DD1442 pKa = 3.87 VRR1444 pKa = 11.84 VTDD1447 pKa = 3.47 PHH1449 pKa = 7.47 VGLSAVSCAPAQGATLDD1466 pKa = 4.73 PGDD1469 pKa = 4.7 QMDD1472 pKa = 4.05 CTAVYY1477 pKa = 7.57 TTTQGDD1483 pKa = 4.24 LNSGSVTNTATVVGSPPTGPNVTDD1507 pKa = 3.39 TDD1509 pKa = 3.68 QALITANQGPAIQITKK1525 pKa = 8.65 TAAPDD1530 pKa = 3.28 TFGAVGTPITFTYY1543 pKa = 10.61 QVTNTGNVTLDD1554 pKa = 3.7 DD1555 pKa = 3.87 VRR1557 pKa = 11.84 VTDD1560 pKa = 3.47 PHH1562 pKa = 7.47 VGLSAVSCAPAQGSTLDD1579 pKa = 4.66 PGDD1582 pKa = 3.52 QMDD1585 pKa = 4.7 CIGRR1589 pKa = 11.84 YY1590 pKa = 6.44 TTTQSDD1596 pKa = 4.18 LNAGSVTDD1604 pKa = 3.65 TATVTGEE1611 pKa = 4.28 PPTGPAVTDD1620 pKa = 3.35 SDD1622 pKa = 3.96 QALITANQGPAITIQKK1638 pKa = 6.97 TANPTEE1644 pKa = 4.48 FGAAGTPITYY1654 pKa = 8.87 TYY1656 pKa = 11.11 QVTNTGNVTLDD1667 pKa = 3.7 DD1668 pKa = 3.87 VRR1670 pKa = 11.84 VTDD1673 pKa = 3.47 PHH1675 pKa = 7.47 VGLSAVSCAPAQGATLEE1692 pKa = 5.19 PGDD1695 pKa = 4.98 QMDD1698 pKa = 3.92 CTAVYY1703 pKa = 7.57 TTTQGDD1709 pKa = 4.24 LNSGSVTNTATVTGEE1724 pKa = 4.19 PPTGNAVTDD1733 pKa = 3.6 SDD1735 pKa = 4.24 QALITANQGPAITTQKK1751 pKa = 8.61 TANPTEE1757 pKa = 4.48 FGAAGTPITYY1767 pKa = 8.87 TYY1769 pKa = 11.11 QVTNTGNVTLDD1780 pKa = 3.43 NVRR1783 pKa = 11.84 VTDD1786 pKa = 3.7 PHH1788 pKa = 7.22 AGLSAVSCAPAQGATLEE1805 pKa = 5.19 PGDD1808 pKa = 5.03 QMDD1811 pKa = 3.59 CTGRR1815 pKa = 11.84 YY1816 pKa = 5.68 TTTQADD1822 pKa = 4.28 LNSGSVTNTATVVGAPPTGPLVTDD1846 pKa = 3.23 SDD1848 pKa = 4.45 SAVVVANQAANIDD1861 pKa = 3.71 ITKK1864 pKa = 10.38 SAFPTEE1870 pKa = 4.72 FGAAGTPINYY1880 pKa = 8.01 TYY1882 pKa = 11.06 QVTNNGNVTLDD1893 pKa = 3.6 DD1894 pKa = 3.97 VQVVDD1899 pKa = 4.29 PHH1901 pKa = 7.47 AGLSTIACNPPQRR1914 pKa = 11.84 SSLDD1918 pKa = 3.42 PGDD1921 pKa = 4.07 TMQCTAEE1928 pKa = 4.16 YY1929 pKa = 7.2 TTTQADD1935 pKa = 4.09 LNRR1938 pKa = 11.84 GGIVNTATVTGTPPAGTEE1956 pKa = 4.09 VTDD1959 pKa = 3.49 SDD1961 pKa = 4.31 SALVIANQSANINIIKK1977 pKa = 8.46 TASPTEE1983 pKa = 4.18 FGAAGTPITYY1993 pKa = 8.95 TYY1995 pKa = 11.28 LVTNNGNVTLDD2006 pKa = 3.78 DD2007 pKa = 3.97 VLVTDD2012 pKa = 4.13 PHH2014 pKa = 7.13 DD2015 pKa = 4.01 GLSAITCDD2023 pKa = 3.49 PAQGARR2029 pKa = 11.84 LDD2031 pKa = 3.93 PGEE2034 pKa = 4.91 EE2035 pKa = 4.13 MTCTADD2041 pKa = 3.33 YY2042 pKa = 7.54 TTTQDD2047 pKa = 4.51 DD2048 pKa = 4.08 LDD2050 pKa = 5.17 AGEE2053 pKa = 5.15 IINTGTTSGLPVTTDD2068 pKa = 2.92 STSPRR2073 pKa = 11.84 LPAALAAEE2081 pKa = 4.33 RR2082 pKa = 11.84 VSDD2085 pKa = 3.79 SDD2087 pKa = 3.93 TAIVTADD2094 pKa = 3.56 QTPSIAISKK2103 pKa = 10.05 SADD2106 pKa = 3.44 PTSVDD2111 pKa = 3.21 AAGDD2115 pKa = 3.87 NIIYY2119 pKa = 10.05 SYY2121 pKa = 11.2 RR2122 pKa = 11.84 VTNNGNVTLHH2132 pKa = 6.71 DD2133 pKa = 3.78 VRR2135 pKa = 11.84 VTDD2138 pKa = 3.55 PHH2140 pKa = 7.1 QGLSDD2145 pKa = 3.76 ISCEE2149 pKa = 3.85 PAQGSNLEE2157 pKa = 4.22 PGEE2160 pKa = 3.98 QQVCTASYY2168 pKa = 8.05 RR2169 pKa = 11.84 TKK2171 pKa = 10.48 QADD2174 pKa = 3.29 IEE2176 pKa = 4.33 RR2177 pKa = 11.84 GSIEE2181 pKa = 4.12 NVGTVAALTPNDD2193 pKa = 3.93 TTVTASDD2200 pKa = 3.31 TAMVSVVEE2208 pKa = 4.83 KK2209 pKa = 8.07 PTPPPTPTPTPSPPSPTPTCPQPPPATPSPSQPPTPPEE2247 pKa = 4.29 SPTPPSTSPTPPPPCQPVATPPTSTPAPTSGPANLSGTGINPLVEE2292 pKa = 4.67 TILGIGAALLLAGAVLLVVHH2312 pKa = 6.35 LRR2314 pKa = 11.84 RR2315 pKa = 11.84 RR2316 pKa = 11.84 RR2317 pKa = 11.84 II2318 pKa = 3.33
Molecular weight: 234.87 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 3.786
IPC2_protein 3.554
IPC_protein 3.63
Toseland 3.376
ProMoST 3.821
Dawson 3.643
Bjellqvist 3.795
Wikipedia 3.617
Rodwell 3.452
Grimsley 3.287
Solomon 3.643
Lehninger 3.605
Nozaki 3.745
DTASelect 4.075
Thurlkill 3.439
EMBOSS 3.617
Sillero 3.757
Patrickios 0.324
IPC_peptide 3.63
IPC2_peptide 3.732
IPC2.peptide.svr19 3.701
Protein with the highest isoelectric point:
>tr|A0A6I5VMQ4|A0A6I5VMQ4_9ACTN Zinc-binding dehydrogenase OS=Microlunatus sp. Gsoil 973 OX=2672569 GN=GJV80_16285 PE=3 SV=1
MM1 pKa = 7.69 SKK3 pKa = 9.01 RR4 pKa = 11.84 TFQPSNRR11 pKa = 11.84 RR12 pKa = 11.84 RR13 pKa = 11.84 SRR15 pKa = 11.84 THH17 pKa = 6.24 GFRR20 pKa = 11.84 HH21 pKa = 6.29 RR22 pKa = 11.84 MRR24 pKa = 11.84 TRR26 pKa = 11.84 AGRR29 pKa = 11.84 AVLAARR35 pKa = 11.84 RR36 pKa = 11.84 RR37 pKa = 11.84 KK38 pKa = 9.68 GRR40 pKa = 11.84 ARR42 pKa = 11.84 LAGG45 pKa = 3.63
Molecular weight: 5.33 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 9.524
IPC2_protein 11.374
IPC_protein 12.983
Toseland 13.144
ProMoST 13.642
Dawson 13.144
Bjellqvist 13.144
Wikipedia 13.627
Rodwell 12.705
Grimsley 13.188
Solomon 13.642
Lehninger 13.554
Nozaki 13.144
DTASelect 13.144
Thurlkill 13.144
EMBOSS 13.642
Sillero 13.144
Patrickios 12.427
IPC_peptide 13.656
IPC2_peptide 12.632
IPC2.peptide.svr19 9.289
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
4311
0
4311
1389878
33
2504
322.4
34.79
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
12.169 ± 0.051
0.734 ± 0.01
6.445 ± 0.039
5.109 ± 0.039
2.917 ± 0.023
9.069 ± 0.029
2.161 ± 0.017
4.685 ± 0.025
2.006 ± 0.03
10.049 ± 0.047
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
1.865 ± 0.015
2.12 ± 0.021
5.783 ± 0.03
3.223 ± 0.019
7.985 ± 0.048
5.625 ± 0.029
6.013 ± 0.035
8.309 ± 0.037
1.569 ± 0.015
2.165 ± 0.018
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here