Amino acid dipepetide frequency for Antonospora locustae virus 1

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
2.222AlaAla: 2.222 ± 0.599
0.0AlaCys: 0.0 ± 0.0
5.926AlaAsp: 5.926 ± 2.166
3.704AlaGlu: 3.704 ± 1.568
3.704AlaPhe: 3.704 ± 1.568
2.963AlaGly: 2.963 ± 0.228
0.741AlaHis: 0.741 ± 0.371
6.667AlaIle: 6.667 ± 0.086
0.0AlaLys: 0.0 ± 0.0
7.407AlaLeu: 7.407 ± 3.135
0.0AlaMet: 0.0 ± 0.0
2.222AlaAsn: 2.222 ± 1.112
0.741AlaPro: 0.741 ± 0.371
3.704AlaGln: 3.704 ± 0.143
5.185AlaArg: 5.185 ± 0.884
5.926AlaSer: 5.926 ± 0.456
0.741AlaThr: 0.741 ± 0.371
0.741AlaVal: 0.741 ± 0.371
1.481AlaTrp: 1.481 ± 0.741
2.222AlaTyr: 2.222 ± 1.112
0.0AlaXaa: 0.0 ± 0.0
Cys
0.0CysAla: 0.0 ± 0.0
0.741CysCys: 0.741 ± 0.371
2.222CysAsp: 2.222 ± 0.599
0.741CysGlu: 0.741 ± 0.371
0.741CysPhe: 0.741 ± 0.371
0.0CysGly: 0.0 ± 0.0
0.0CysHis: 0.0 ± 0.0
0.741CysIle: 0.741 ± 0.371
0.741CysLys: 0.741 ± 0.371
0.0CysLeu: 0.0 ± 0.0
0.0CysMet: 0.0 ± 0.0
0.741CysAsn: 0.741 ± 0.371
1.481CysPro: 1.481 ± 0.969
0.0CysGln: 0.0 ± 0.0
0.741CysArg: 0.741 ± 0.371
0.0CysSer: 0.0 ± 0.0
0.741CysThr: 0.741 ± 1.34
1.481CysVal: 1.481 ± 0.741
0.0CysTrp: 0.0 ± 0.0
0.0CysTyr: 0.0 ± 0.0
0.0CysXaa: 0.0 ± 0.0
Asp
0.741AspAla: 0.741 ± 0.371
0.741AspCys: 0.741 ± 0.371
2.963AspAsp: 2.963 ± 0.228
4.444AspGlu: 4.444 ± 0.513
8.148AspPhe: 8.148 ± 2.765
3.704AspGly: 3.704 ± 1.568
2.963AspHis: 2.963 ± 0.228
2.222AspIle: 2.222 ± 0.599
5.185AspLys: 5.185 ± 0.827
7.407AspLeu: 7.407 ± 0.285
0.741AspMet: 0.741 ± 0.371
2.222AspAsn: 2.222 ± 1.112
0.0AspPro: 0.0 ± 0.0
2.222AspGln: 2.222 ± 0.599
3.704AspArg: 3.704 ± 0.143
4.444AspSer: 4.444 ± 2.223
2.963AspThr: 2.963 ± 1.482
0.741AspVal: 0.741 ± 0.371
0.741AspTrp: 0.741 ± 0.371
3.704AspTyr: 3.704 ± 0.143
0.0AspXaa: 0.0 ± 0.0
Glu
6.667GluAla: 6.667 ± 3.506
3.704GluCys: 3.704 ± 1.568
2.963GluAsp: 2.963 ± 1.938
5.926GluGlu: 5.926 ± 2.166
3.704GluPhe: 3.704 ± 0.143
0.741GluGly: 0.741 ± 0.371
1.481GluHis: 1.481 ± 0.741
1.481GluIle: 1.481 ± 0.741
2.963GluLys: 2.963 ± 1.938
8.148GluLeu: 8.148 ± 4.475
0.0GluMet: 0.0 ± 0.0
1.481GluAsn: 1.481 ± 0.969
4.444GluPro: 4.444 ± 0.513
3.704GluGln: 3.704 ± 1.568
4.444GluArg: 4.444 ± 1.197
2.222GluSer: 2.222 ± 1.112
2.963GluThr: 2.963 ± 0.228
2.222GluVal: 2.222 ± 1.112
0.0GluTrp: 0.0 ± 0.0
5.185GluTyr: 5.185 ± 0.884
0.0GluXaa: 0.0 ± 0.0
Phe
1.481PheAla: 1.481 ± 0.741
0.0PheCys: 0.0 ± 0.0
5.185PheAsp: 5.185 ± 2.537
2.222PheGlu: 2.222 ± 0.599
2.963PhePhe: 2.963 ± 0.228
4.444PheGly: 4.444 ± 2.223
0.741PheHis: 0.741 ± 0.371
2.222PheIle: 2.222 ± 1.112
8.148PheLys: 8.148 ± 1.055
5.185PheLeu: 5.185 ± 0.827
2.222PheMet: 2.222 ± 0.599
5.185PheAsn: 5.185 ± 0.827
0.741PhePro: 0.741 ± 0.371
1.481PheGln: 1.481 ± 0.969
1.481PheArg: 1.481 ± 0.741
5.926PheSer: 5.926 ± 2.166
4.444PheThr: 4.444 ± 1.197
4.444PheVal: 4.444 ± 1.197
0.0PheTrp: 0.0 ± 0.0
0.741PheTyr: 0.741 ± 0.371
0.0PheXaa: 0.0 ± 0.0
Gly
2.222GlyAla: 2.222 ± 1.112
0.741GlyCys: 0.741 ± 0.371
2.222GlyAsp: 2.222 ± 1.112
3.704GlyGlu: 3.704 ± 0.143
3.704GlyPhe: 3.704 ± 0.143
3.704GlyGly: 3.704 ± 1.853
0.741GlyHis: 0.741 ± 0.371
5.185GlyIle: 5.185 ± 0.884
3.704GlyLys: 3.704 ± 0.143
5.926GlyLeu: 5.926 ± 0.456
2.222GlyMet: 2.222 ± 1.112
2.222GlyAsn: 2.222 ± 0.599
3.704GlyPro: 3.704 ± 1.853
0.0GlyGln: 0.0 ± 0.0
2.963GlyArg: 2.963 ± 0.228
1.481GlySer: 1.481 ± 0.969
4.444GlyThr: 4.444 ± 2.223
2.222GlyVal: 2.222 ± 0.599
0.0GlyTrp: 0.0 ± 0.0
2.222GlyTyr: 2.222 ± 1.112
0.0GlyXaa: 0.0 ± 0.0
His
0.741HisAla: 0.741 ± 0.371
0.0HisCys: 0.0 ± 0.0
0.0HisAsp: 0.0 ± 0.0
0.741HisGlu: 0.741 ± 0.371
2.222HisPhe: 2.222 ± 0.599
2.963HisGly: 2.963 ± 1.938
0.0HisHis: 0.0 ± 0.0
0.741HisIle: 0.741 ± 0.371
0.0HisLys: 0.0 ± 0.0
2.222HisLeu: 2.222 ± 1.112
2.222HisMet: 2.222 ± 1.112
1.481HisAsn: 1.481 ± 0.741
1.481HisPro: 1.481 ± 0.741
0.0HisGln: 0.0 ± 0.0
1.481HisArg: 1.481 ± 0.741
0.741HisSer: 0.741 ± 0.371
0.741HisThr: 0.741 ± 0.371
0.741HisVal: 0.741 ± 0.371
0.0HisTrp: 0.0 ± 0.0
0.741HisTyr: 0.741 ± 0.371
0.0HisXaa: 0.0 ± 0.0
Ile
1.481IleAla: 1.481 ± 0.741
1.481IleCys: 1.481 ± 0.969
3.704IleAsp: 3.704 ± 1.853
2.963IleGlu: 2.963 ± 1.938
4.444IlePhe: 4.444 ± 2.907
3.704IleGly: 3.704 ± 0.143
0.0IleHis: 0.0 ± 0.0
5.185IleIle: 5.185 ± 0.884
4.444IleLys: 4.444 ± 1.197
2.222IleLeu: 2.222 ± 0.599
2.963IleMet: 2.963 ± 0.228
7.407IleAsn: 7.407 ± 3.135
0.741IlePro: 0.741 ± 0.371
1.481IleGln: 1.481 ± 0.741
3.704IleArg: 3.704 ± 1.568
7.407IleSer: 7.407 ± 1.995
0.741IleThr: 0.741 ± 0.371
2.222IleVal: 2.222 ± 1.112
0.741IleTrp: 0.741 ± 0.371
1.481IleTyr: 1.481 ± 0.741
0.0IleXaa: 0.0 ± 0.0
Lys
2.963LysAla: 2.963 ± 0.228
0.0LysCys: 0.0 ± 0.0
5.185LysAsp: 5.185 ± 2.537
6.667LysGlu: 6.667 ± 3.506
4.444LysPhe: 4.444 ± 1.197
4.444LysGly: 4.444 ± 2.223
0.0LysHis: 0.0 ± 0.0
7.407LysIle: 7.407 ± 3.135
7.407LysLys: 7.407 ± 3.135
8.148LysLeu: 8.148 ± 2.765
2.222LysMet: 2.222 ± 0.599
4.444LysAsn: 4.444 ± 2.223
1.481LysPro: 1.481 ± 0.741
5.185LysGln: 5.185 ± 0.827
4.444LysArg: 4.444 ± 0.513
6.667LysSer: 6.667 ± 0.086
2.222LysThr: 2.222 ± 0.599
4.444LysVal: 4.444 ± 1.197
0.741LysTrp: 0.741 ± 0.371
2.963LysTyr: 2.963 ± 0.228
0.0LysXaa: 0.0 ± 0.0
Leu
5.926LeuAla: 5.926 ± 1.254
0.0LeuCys: 0.0 ± 0.0
4.444LeuAsp: 4.444 ± 2.223
4.444LeuGlu: 4.444 ± 1.197
5.185LeuPhe: 5.185 ± 0.827
5.185LeuGly: 5.185 ± 0.884
2.963LeuHis: 2.963 ± 0.228
5.185LeuIle: 5.185 ± 0.827
7.407LeuLys: 7.407 ± 3.135
11.111LeuLeu: 11.111 ± 2.138
3.704LeuMet: 3.704 ± 0.934
5.185LeuAsn: 5.185 ± 0.884
1.481LeuPro: 1.481 ± 0.969
5.926LeuGln: 5.926 ± 1.254
9.63LeuArg: 9.63 ± 0.314
5.185LeuSer: 5.185 ± 0.827
2.963LeuThr: 2.963 ± 0.228
5.185LeuVal: 5.185 ± 0.827
0.741LeuTrp: 0.741 ± 0.371
6.667LeuTyr: 6.667 ± 0.086
0.0LeuXaa: 0.0 ± 0.0
Met
2.222MetAla: 2.222 ± 0.599
0.0MetCys: 0.0 ± 0.0
2.222MetAsp: 2.222 ± 0.599
2.222MetGlu: 2.222 ± 0.599
0.741MetPhe: 0.741 ± 0.371
0.741MetGly: 0.741 ± 0.371
0.0MetHis: 0.0 ± 0.0
3.704MetIle: 3.704 ± 0.143
3.704MetLys: 3.704 ± 0.143
2.222MetLeu: 2.222 ± 0.599
0.0MetMet: 0.0 ± 0.0
0.741MetAsn: 0.741 ± 0.371
2.222MetPro: 2.222 ± 1.112
0.741MetGln: 0.741 ± 0.371
1.481MetArg: 1.481 ± 0.741
1.481MetSer: 1.481 ± 0.969
0.741MetThr: 0.741 ± 0.371
1.481MetVal: 1.481 ± 0.741
0.741MetTrp: 0.741 ± 0.371
0.741MetTyr: 0.741 ± 0.371
0.0MetXaa: 0.0 ± 0.0
Asn
4.444AsnAla: 4.444 ± 1.197
0.0AsnCys: 0.0 ± 0.0
2.963AsnAsp: 2.963 ± 0.228
7.407AsnGlu: 7.407 ± 3.135
5.185AsnPhe: 5.185 ± 0.884
3.704AsnGly: 3.704 ± 0.143
0.0AsnHis: 0.0 ± 0.0
2.222AsnIle: 2.222 ± 1.112
5.926AsnLys: 5.926 ± 0.456
3.704AsnLeu: 3.704 ± 0.143
2.222AsnMet: 2.222 ± 0.599
0.0AsnAsn: 0.0 ± 0.0
2.963AsnPro: 2.963 ± 0.228
0.0AsnGln: 0.0 ± 0.0
1.481AsnArg: 1.481 ± 0.969
1.481AsnSer: 1.481 ± 0.741
0.0AsnThr: 0.0 ± 0.0
3.704AsnVal: 3.704 ± 0.143
2.222AsnTrp: 2.222 ± 0.599
3.704AsnTyr: 3.704 ± 1.853
0.0AsnXaa: 0.0 ± 0.0
Pro
1.481ProAla: 1.481 ± 0.969
0.741ProCys: 0.741 ± 0.371
0.741ProAsp: 0.741 ± 0.371
2.963ProGlu: 2.963 ± 1.482
1.481ProPhe: 1.481 ± 0.741
1.481ProGly: 1.481 ± 0.741
0.0ProHis: 0.0 ± 0.0
0.0ProIle: 0.0 ± 0.0
4.444ProLys: 4.444 ± 0.513
2.222ProLeu: 2.222 ± 1.112
1.481ProMet: 1.481 ± 0.829
0.741ProAsn: 0.741 ± 0.371
2.222ProPro: 2.222 ± 1.112
2.222ProGln: 2.222 ± 0.599
0.0ProArg: 0.0 ± 0.0
3.704ProSer: 3.704 ± 0.143
0.0ProThr: 0.0 ± 0.0
2.222ProVal: 2.222 ± 1.112
0.0ProTrp: 0.0 ± 0.0
2.963ProTyr: 2.963 ± 1.482
0.0ProXaa: 0.0 ± 0.0
Gln
5.185GlnAla: 5.185 ± 0.827
0.741GlnCys: 0.741 ± 0.371
0.741GlnAsp: 0.741 ± 0.371
2.963GlnGlu: 2.963 ± 1.938
5.185GlnPhe: 5.185 ± 0.884
0.0GlnGly: 0.0 ± 0.0
2.222GlnHis: 2.222 ± 0.599
0.0GlnIle: 0.0 ± 0.0
8.148GlnLys: 8.148 ± 2.765
0.741GlnLeu: 0.741 ± 0.371
0.741GlnMet: 0.741 ± 0.371
0.741GlnAsn: 0.741 ± 0.371
0.0GlnPro: 0.0 ± 0.0
0.741GlnGln: 0.741 ± 0.371
2.222GlnArg: 2.222 ± 2.309
2.222GlnSer: 2.222 ± 0.599
3.704GlnThr: 3.704 ± 1.568
1.481GlnVal: 1.481 ± 0.741
0.0GlnTrp: 0.0 ± 0.0
2.222GlnTyr: 2.222 ± 0.599
0.0GlnXaa: 0.0 ± 0.0
Arg
5.926ArgAla: 5.926 ± 0.456
0.0ArgCys: 0.0 ± 0.0
0.741ArgAsp: 0.741 ± 0.371
2.963ArgGlu: 2.963 ± 1.482
0.0ArgPhe: 0.0 ± 0.0
2.963ArgGly: 2.963 ± 1.482
1.481ArgHis: 1.481 ± 0.741
2.963ArgIle: 2.963 ± 1.938
1.481ArgLys: 1.481 ± 0.969
8.148ArgLeu: 8.148 ± 0.656
2.963ArgMet: 2.963 ± 1.482
2.963ArgAsn: 2.963 ± 0.228
3.704ArgPro: 3.704 ± 1.853
2.222ArgGln: 2.222 ± 2.309
3.704ArgArg: 3.704 ± 1.853
5.926ArgSer: 5.926 ± 1.254
2.963ArgThr: 2.963 ± 0.228
5.185ArgVal: 5.185 ± 0.827
2.222ArgTrp: 2.222 ± 0.599
0.741ArgTyr: 0.741 ± 0.371
0.0ArgXaa: 0.0 ± 0.0
Ser
5.926SerAla: 5.926 ± 0.456
0.741SerCys: 0.741 ± 0.371
5.926SerAsp: 5.926 ± 1.254
4.444SerGlu: 4.444 ± 1.197
0.741SerPhe: 0.741 ± 0.371
5.926SerGly: 5.926 ± 0.456
1.481SerHis: 1.481 ± 0.741
2.963SerIle: 2.963 ± 1.938
5.926SerLys: 5.926 ± 1.254
7.407SerLeu: 7.407 ± 0.285
2.963SerMet: 2.963 ± 1.482
5.926SerAsn: 5.926 ± 2.166
1.481SerPro: 1.481 ± 0.741
5.926SerGln: 5.926 ± 2.166
3.704SerArg: 3.704 ± 0.143
1.481SerSer: 1.481 ± 0.741
3.704SerThr: 3.704 ± 1.853
6.667SerVal: 6.667 ± 0.086
1.481SerTrp: 1.481 ± 0.741
1.481SerTyr: 1.481 ± 0.741
0.0SerXaa: 0.0 ± 0.0
Thr
2.222ThrAla: 2.222 ± 0.599
0.741ThrCys: 0.741 ± 0.371
2.222ThrAsp: 2.222 ± 1.112
1.481ThrGlu: 1.481 ± 0.969
1.481ThrPhe: 1.481 ± 0.969
2.222ThrGly: 2.222 ± 1.112
0.741ThrHis: 0.741 ± 0.371
2.222ThrIle: 2.222 ± 0.599
2.222ThrLys: 2.222 ± 0.599
2.963ThrLeu: 2.963 ± 1.482
0.0ThrMet: 0.0 ± 0.0
2.963ThrAsn: 2.963 ± 1.938
2.222ThrPro: 2.222 ± 0.599
2.222ThrGln: 2.222 ± 0.599
2.222ThrArg: 2.222 ± 1.112
5.185ThrSer: 5.185 ± 0.884
3.704ThrThr: 3.704 ± 0.143
0.0ThrVal: 0.0 ± 0.0
0.741ThrTrp: 0.741 ± 0.371
2.963ThrTyr: 2.963 ± 1.482
0.0ThrXaa: 0.0 ± 0.0
Val
1.481ValAla: 1.481 ± 0.741
0.0ValCys: 0.0 ± 0.0
4.444ValAsp: 4.444 ± 0.513
1.481ValGlu: 1.481 ± 0.969
2.222ValPhe: 2.222 ± 0.599
2.963ValGly: 2.963 ± 1.482
2.963ValHis: 2.963 ± 1.482
2.963ValIle: 2.963 ± 1.482
6.667ValLys: 6.667 ± 1.796
5.926ValLeu: 5.926 ± 1.254
0.0ValMet: 0.0 ± 0.0
2.222ValAsn: 2.222 ± 0.599
0.741ValPro: 0.741 ± 0.371
0.741ValGln: 0.741 ± 1.34
3.704ValArg: 3.704 ± 1.853
4.444ValSer: 4.444 ± 1.197
2.222ValThr: 2.222 ± 0.599
3.704ValVal: 3.704 ± 1.853
0.0ValTrp: 0.0 ± 0.0
2.222ValTyr: 2.222 ± 1.112
0.0ValXaa: 0.0 ± 0.0
Trp
0.741TrpAla: 0.741 ± 0.371
0.741TrpCys: 0.741 ± 0.371
0.741TrpAsp: 0.741 ± 0.371
0.741TrpGlu: 0.741 ± 0.371
1.481TrpPhe: 1.481 ± 0.741
0.0TrpGly: 0.0 ± 0.0
0.0TrpHis: 0.0 ± 0.0
1.481TrpIle: 1.481 ± 0.969
0.741TrpLys: 0.741 ± 0.371
1.481TrpLeu: 1.481 ± 0.741
0.0TrpMet: 0.0 ± 0.0
0.0TrpAsn: 0.0 ± 0.0
0.0TrpPro: 0.0 ± 0.0
0.741TrpGln: 0.741 ± 0.371
0.0TrpArg: 0.0 ± 0.0
2.222TrpSer: 2.222 ± 0.599
0.741TrpThr: 0.741 ± 0.371
0.0TrpVal: 0.0 ± 0.0
0.0TrpTrp: 0.0 ± 0.0
0.741TrpTyr: 0.741 ± 0.371
0.0TrpXaa: 0.0 ± 0.0
Tyr
2.222TyrAla: 2.222 ± 0.599
0.0TyrCys: 0.0 ± 0.0
4.444TyrAsp: 4.444 ± 2.223
2.222TyrGlu: 2.222 ± 1.112
1.481TyrPhe: 1.481 ± 0.741
1.481TyrGly: 1.481 ± 0.741
0.741TyrHis: 0.741 ± 0.371
2.963TyrIle: 2.963 ± 0.228
2.222TyrLys: 2.222 ± 1.112
5.926TyrLeu: 5.926 ± 1.254
0.741TyrMet: 0.741 ± 0.371
4.444TyrAsn: 4.444 ± 0.513
0.0TyrPro: 0.0 ± 0.0
0.741TyrGln: 0.741 ± 0.371
2.963TyrArg: 2.963 ± 1.482
8.148TyrSer: 8.148 ± 0.656
0.0TyrThr: 0.0 ± 0.0
2.222TyrVal: 2.222 ± 1.112
0.741TyrTrp: 0.741 ± 0.371
1.481TyrTyr: 1.481 ± 0.741
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 2 proteins (1351 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski