Verrucomicrobiales bacterium T37

Taxonomy: cellular organisms; Bacteria; PVC group; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; unclassified Verrucomicrobiales

Average proteome isoelectric point is 6.06

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2971 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    

Protein with the lowest isoelectric point:
>tr|A0A7T7F3A8|A0A7T7F3A8_9BACT Uncharacterized protein OS=Verrucomicrobiales bacterium T37 OX=2707525 GN=G3M56_004075 PE=4 SV=1
MM1 pKa = 7.22TRR3 pKa = 11.84FASSCSDD10 pKa = 3.59VVCSTIRR17 pKa = 11.84TFSASVVGFAVCLVAPAMAQLPEE40 pKa = 4.28TFQVTVDD47 pKa = 3.23KK48 pKa = 11.48GGGEE52 pKa = 3.98MVEE55 pKa = 4.42LNLHH59 pKa = 5.47KK60 pKa = 10.03HH61 pKa = 6.03TIRR64 pKa = 11.84STDD67 pKa = 3.34CRR69 pKa = 11.84ILSWDD74 pKa = 3.41STNGYY79 pKa = 8.57VVEE82 pKa = 4.92HH83 pKa = 6.78SPTNPGLPARR93 pKa = 11.84TYY95 pKa = 10.4RR96 pKa = 11.84GHH98 pKa = 6.42LTEE101 pKa = 4.79NPNHH105 pKa = 5.78VVFAVINEE113 pKa = 4.18DD114 pKa = 3.07NTLQAEE120 pKa = 4.43VHH122 pKa = 6.66DD123 pKa = 4.57GSGRR127 pKa = 11.84LWTISGDD134 pKa = 3.76DD135 pKa = 3.52VTAEE139 pKa = 4.2LGNGGSVAPAPAALAAGGGTPVAAGLPGQYY169 pKa = 10.12LPPVEE174 pKa = 5.27LYY176 pKa = 9.95RR177 pKa = 11.84AHH179 pKa = 6.62GVEE182 pKa = 4.63DD183 pKa = 3.92VPSQFFDD190 pKa = 3.68RR191 pKa = 11.84NGQSVVQTMVWLEE204 pKa = 4.06HH205 pKa = 5.04QWNIFDD211 pKa = 4.03YY212 pKa = 11.25FNARR216 pKa = 11.84DD217 pKa = 3.7AKK219 pKa = 10.88LSMEE223 pKa = 4.06LTEE226 pKa = 4.2VIIRR230 pKa = 11.84KK231 pKa = 7.2EE232 pKa = 3.66QFYY235 pKa = 10.63FPTAGNAGQFNSMLKK250 pKa = 9.28TEE252 pKa = 4.69WDD254 pKa = 3.44AQGQNARR261 pKa = 11.84GFIHH265 pKa = 6.59SWFPYY270 pKa = 8.53NFTYY274 pKa = 10.66AGGYY278 pKa = 9.76ASGNEE283 pKa = 4.19FYY285 pKa = 11.11GPNLSVSVNALYY297 pKa = 10.83HH298 pKa = 5.64EE299 pKa = 5.11VGHH302 pKa = 6.08NWRR305 pKa = 11.84CQHH308 pKa = 5.48YY309 pKa = 8.61FYY311 pKa = 11.14GRR313 pKa = 11.84EE314 pKa = 4.01TMTGSHH320 pKa = 7.23PSHH323 pKa = 7.76GEE325 pKa = 3.67MNTQRR330 pKa = 11.84VLYY333 pKa = 8.89TRR335 pKa = 11.84QIQIDD340 pKa = 3.84QNDD343 pKa = 5.05GIEE346 pKa = 4.29LLTNYY351 pKa = 7.55RR352 pKa = 11.84TNVHH356 pKa = 5.95PRR358 pKa = 11.84AYY360 pKa = 9.19TDD362 pKa = 3.1VATTMVDD369 pKa = 3.26TAVVLLPLANDD380 pKa = 3.36YY381 pKa = 10.5DD382 pKa = 4.74ANGDD386 pKa = 3.75ALSIRR391 pKa = 11.84SHH393 pKa = 5.35TTTTAQGGTVTADD406 pKa = 2.92GDD408 pKa = 3.98MLTYY412 pKa = 10.04TPAAGYY418 pKa = 9.36VGKK421 pKa = 10.19DD422 pKa = 3.15VIVYY426 pKa = 8.97EE427 pKa = 4.37VEE429 pKa = 4.24DD430 pKa = 4.24APGLYY435 pKa = 9.16TRR437 pKa = 11.84GVIHH441 pKa = 6.69VEE443 pKa = 4.26VINQGLAAHH452 pKa = 7.2WNMEE456 pKa = 4.3DD457 pKa = 3.35TSGTSASDD465 pKa = 3.18ASGNGHH471 pKa = 6.31SGAVVGTDD479 pKa = 3.81FVSGSVQGPVGSALALGSGDD499 pKa = 3.58YY500 pKa = 11.23VIGNNSNLIEE510 pKa = 5.2GYY512 pKa = 6.74TTDD515 pKa = 3.89YY516 pKa = 11.09PLDD519 pKa = 4.07APASNFFDD527 pKa = 4.86PMDD530 pKa = 3.59QSFTAATWVKK540 pKa = 10.53LDD542 pKa = 3.83AASTSATVLSKK553 pKa = 10.84INAANLGYY561 pKa = 10.56KK562 pKa = 8.52ITANAGSGFTATVRR576 pKa = 11.84VWDD579 pKa = 4.17GLQGQYY585 pKa = 10.46SVSSGTPLATDD596 pKa = 3.19AWYY599 pKa = 9.78HH600 pKa = 4.36VAMVIDD606 pKa = 4.41RR607 pKa = 11.84SDD609 pKa = 3.29DD610 pKa = 3.55TLRR613 pKa = 11.84LYY615 pKa = 11.55VNGEE619 pKa = 4.28EE620 pKa = 4.24VGSAASLPSGFFVFNGRR637 pKa = 11.84EE638 pKa = 3.91DD639 pKa = 3.71FKK641 pKa = 11.16IGGGGAMAVDD651 pKa = 4.08EE652 pKa = 4.37TSLYY656 pKa = 11.12SKK658 pKa = 10.8ALTPAEE664 pKa = 4.19VQALHH669 pKa = 6.58GVGEE673 pKa = 4.56VPAAPIQPAPNALGQSLATTLEE695 pKa = 4.17WLSGQSSYY703 pKa = 8.75QHH705 pKa = 6.69DD706 pKa = 4.45VYY708 pKa = 11.13FGTDD712 pKa = 2.96AAAVEE717 pKa = 4.57AATTASPEE725 pKa = 3.86YY726 pKa = 9.62MGRR729 pKa = 11.84QSATTFDD736 pKa = 4.25PGALSPSTNYY746 pKa = 8.93FWRR749 pKa = 11.84IDD751 pKa = 3.81EE752 pKa = 4.28VDD754 pKa = 3.98GGTLIPGTVWSFSTAANGLVNGLVLHH780 pKa = 6.36LTMDD784 pKa = 4.27DD785 pKa = 4.23ADD787 pKa = 3.75VQVANGVTHH796 pKa = 6.87TFDD799 pKa = 6.63DD800 pKa = 3.75IALPASDD807 pKa = 4.82FEE809 pKa = 4.84SVDD812 pKa = 3.56AVAGAPGAIGQAVDD826 pKa = 4.4LSSSADD832 pKa = 3.33ALRR835 pKa = 11.84SYY837 pKa = 9.39ATNPVSRR844 pKa = 11.84PVNGGLTVSFWINTTSTQNGGEE866 pKa = 4.27KK867 pKa = 10.32VFDD870 pKa = 3.13MGGAVFVRR878 pKa = 11.84FYY880 pKa = 11.28NGDD883 pKa = 3.68LQPVFDD889 pKa = 4.83GSSGGAQIFDD899 pKa = 3.88ANINDD904 pKa = 4.57GQWHH908 pKa = 6.32HH909 pKa = 6.38VVAHH913 pKa = 6.62NDD915 pKa = 3.66GAGTTTMWVDD925 pKa = 3.83GVAIGTQSEE934 pKa = 4.65TIYY937 pKa = 10.83DD938 pKa = 3.58IASLGRR944 pKa = 11.84EE945 pKa = 3.98VSIGATYY952 pKa = 11.13NSTGEE957 pKa = 3.99NLEE960 pKa = 4.09ALFDD964 pKa = 5.33DD965 pKa = 4.77FAVWQRR971 pKa = 11.84ALSTAEE977 pKa = 3.46IDD979 pKa = 3.68HH980 pKa = 6.77IYY982 pKa = 10.74SEE984 pKa = 4.93GVAGRR989 pKa = 11.84GFNAEE994 pKa = 4.12PVLIDD999 pKa = 3.29TSFEE1003 pKa = 4.07EE1004 pKa = 4.9GDD1006 pKa = 3.69GFTGFTAGGTSALGTLVDD1024 pKa = 3.87NAGVTWTEE1032 pKa = 3.96VADD1035 pKa = 3.49VDD1037 pKa = 3.02IWNRR1041 pKa = 11.84TDD1043 pKa = 3.2IPPAGVQALTFGLSANLSQVDD1064 pKa = 3.8VEE1066 pKa = 5.35IPGTDD1071 pKa = 2.95HH1072 pKa = 7.3GVGTVSFDD1080 pKa = 3.5YY1081 pKa = 11.28ASFSSSSNATLRR1093 pKa = 11.84VLYY1096 pKa = 10.42NDD1098 pKa = 3.2NTGAGWVEE1106 pKa = 3.93AWAGEE1111 pKa = 4.1IVGLNPSFSDD1121 pKa = 3.7KK1122 pKa = 9.83PWRR1125 pKa = 11.84SAEE1128 pKa = 4.01VAVNVPGNVDD1138 pKa = 3.79LRR1140 pKa = 11.84FEE1142 pKa = 4.1MDD1144 pKa = 3.04GDD1146 pKa = 3.62KK1147 pKa = 11.46GGMIDD1152 pKa = 3.52NLRR1155 pKa = 11.84VTGVAINAVPSFTNDD1170 pKa = 4.13PIAGTGGQSGVEE1182 pKa = 4.09YY1183 pKa = 9.81TGTLAGSATDD1193 pKa = 4.61ADD1195 pKa = 4.37PLDD1198 pKa = 3.48VLTFSKK1204 pKa = 9.74VTGPAWLVVSADD1216 pKa = 3.65GSLSGTPGLADD1227 pKa = 3.29VGDD1230 pKa = 3.85NAFTVQVEE1238 pKa = 4.25DD1239 pKa = 4.33GNGGSDD1245 pKa = 3.13TATLNISVEE1254 pKa = 4.36SGPVTLWGEE1263 pKa = 4.27DD1264 pKa = 3.56FEE1266 pKa = 4.91GAAGSTLGGNWVEE1279 pKa = 4.18VVNDD1283 pKa = 3.34SRR1285 pKa = 11.84IFNTGNGATQMLISVSAGQPIGVVNQLADD1314 pKa = 3.57TFVEE1318 pKa = 4.18GDD1320 pKa = 3.33RR1321 pKa = 11.84YY1322 pKa = 8.67EE1323 pKa = 4.78LKK1325 pKa = 10.47WNASRR1330 pKa = 11.84AASANGTLLYY1340 pKa = 10.36EE1341 pKa = 4.43VALGTWDD1348 pKa = 3.43GTTFTPLAGDD1358 pKa = 3.4SGTIAEE1364 pKa = 4.89LNLFGKK1370 pKa = 10.12VAGPSVYY1377 pKa = 8.75FTASAAEE1384 pKa = 4.33AGQQIAVRR1392 pKa = 11.84LDD1394 pKa = 3.35VLAGSSDD1401 pKa = 2.88WVGFDD1406 pKa = 4.18DD1407 pKa = 5.41IEE1409 pKa = 4.74VVGLGANSAPSFSVDD1424 pKa = 4.37PIAKK1428 pKa = 9.91ADD1430 pKa = 3.65ATQDD1434 pKa = 3.27EE1435 pKa = 6.05AYY1437 pKa = 7.66TASIGADD1444 pKa = 3.25AADD1447 pKa = 3.63VDD1449 pKa = 4.62AGDD1452 pKa = 4.7SIAFSKK1458 pKa = 11.02VSGPAWLSVAADD1470 pKa = 4.0GSVSGTPTNGDD1481 pKa = 2.88VGANAFTVRR1490 pKa = 11.84ATDD1493 pKa = 3.46EE1494 pKa = 4.57GGLTADD1500 pKa = 3.2ATLNVTVLNVNDD1512 pKa = 4.12APIANDD1518 pKa = 3.11SSGSVAEE1525 pKa = 4.34DD1526 pKa = 3.19AAVGTVVASVAAADD1540 pKa = 4.06IDD1542 pKa = 4.13SSDD1545 pKa = 3.52TLGYY1549 pKa = 10.65AITAGNEE1556 pKa = 3.78SGAFAIDD1563 pKa = 3.49SNGNITTAAALDD1575 pKa = 4.0FEE1577 pKa = 4.95TTASYY1582 pKa = 11.57ALTVTVSDD1590 pKa = 3.46NGTPVLNDD1598 pKa = 3.31TATVTVNVTNVNEE1611 pKa = 4.15APAASDD1617 pKa = 3.66GSGSLAEE1624 pKa = 4.57DD1625 pKa = 3.49ATVGTAVATVAVSDD1639 pKa = 4.4PDD1641 pKa = 4.44AGDD1644 pKa = 3.56SASFAITSGNIGGAFAIDD1662 pKa = 3.13AAGNITTATALDD1674 pKa = 4.12HH1675 pKa = 6.07EE1676 pKa = 4.98TASSYY1681 pKa = 11.71ALVVTVTDD1689 pKa = 3.59NGGLTDD1695 pKa = 3.92IAAVNVNVTNVNEE1708 pKa = 4.22APVASDD1714 pKa = 3.25GSGSVAEE1721 pKa = 4.45DD1722 pKa = 3.24AAVGTVVATVAVSDD1736 pKa = 4.4PDD1738 pKa = 4.44AGDD1741 pKa = 3.56SASFAITSGNTGGAFAIDD1759 pKa = 3.2AAGNITTATALDD1771 pKa = 4.05YY1772 pKa = 7.53EE1773 pKa = 4.87TTSSYY1778 pKa = 11.74ALVVTVTDD1786 pKa = 3.95GGGLTDD1792 pKa = 3.87TAAVNVNVTNVNEE1805 pKa = 4.22APVASDD1811 pKa = 3.43GSGSLAEE1818 pKa = 4.57DD1819 pKa = 3.49ATVGTAVATVAVSDD1833 pKa = 4.52PDD1835 pKa = 3.93ASDD1838 pKa = 3.41SASFAITDD1846 pKa = 4.02GNTGGAFAIDD1856 pKa = 3.2AAGNITTATALDD1868 pKa = 4.31YY1869 pKa = 7.43EE1870 pKa = 4.79TSSSYY1875 pKa = 11.71ALVVTVTDD1883 pKa = 3.95GGGLTDD1889 pKa = 3.82TAAVNVSVTNVNEE1902 pKa = 4.03APVASDD1908 pKa = 3.25GSGSVAEE1915 pKa = 4.55DD1916 pKa = 3.32ATVGTAVATVAVSDD1930 pKa = 4.4PDD1932 pKa = 4.44AGDD1935 pKa = 3.56SASFAITSGNTGGAFAIDD1953 pKa = 3.96SATGAITTAAALDD1966 pKa = 3.96YY1967 pKa = 7.13EE1968 pKa = 4.85TTSSYY1973 pKa = 10.97TLGVSVTDD1981 pKa = 4.03GGGLSDD1987 pKa = 4.04AATVTIAVTNVNEE2000 pKa = 4.43SPVFASDD2007 pKa = 4.81PIVAADD2013 pKa = 4.12GSTLAAYY2020 pKa = 7.78TGTLAGSASDD2030 pKa = 4.18PDD2032 pKa = 4.5AGDD2035 pKa = 3.27TLSFSKK2041 pKa = 10.96VSGPAWLSVATDD2053 pKa = 3.95GALSGTPGVSDD2064 pKa = 3.8AGLNSFTVEE2073 pKa = 3.95VSDD2076 pKa = 4.8GNGGTAQATLEE2087 pKa = 4.2INVAATSVVLFDD2099 pKa = 5.26DD2100 pKa = 4.48FEE2102 pKa = 6.42SYY2104 pKa = 10.87DD2105 pKa = 3.55VEE2107 pKa = 4.38NPSDD2111 pKa = 3.86FSVGGTPTGNWTASDD2126 pKa = 3.65TASNATRR2133 pKa = 11.84IFDD2136 pKa = 3.57TTNYY2140 pKa = 10.27GGTRR2144 pKa = 11.84LWISNVDD2151 pKa = 3.34GSSITSSGATVAEE2164 pKa = 4.21NTHH2167 pKa = 5.28YY2168 pKa = 9.69TLSAVMVTEE2177 pKa = 4.36TGTAGRR2183 pKa = 11.84TLNATYY2189 pKa = 10.56DD2190 pKa = 3.63VLVGQDD2196 pKa = 3.2AASATSIIGGPQAVVTNGDD2215 pKa = 2.51AWQIDD2220 pKa = 4.29DD2221 pKa = 4.32SKK2223 pKa = 10.62EE2224 pKa = 3.79DD2225 pKa = 3.51HH2226 pKa = 6.69VFSQSFQTGALNPGDD2241 pKa = 3.56QLFVRR2246 pKa = 11.84FTRR2249 pKa = 11.84VGVEE2253 pKa = 3.98STGGWFGVDD2262 pKa = 3.06DD2263 pKa = 4.33VMVDD2267 pKa = 3.36TVGANSAPVANDD2279 pKa = 3.93AIFAVAEE2286 pKa = 4.02NEE2288 pKa = 4.15AAGTAVGTVTAADD2301 pKa = 3.67ADD2303 pKa = 4.11AADD2306 pKa = 4.03TLSYY2310 pKa = 10.8AITAGNEE2317 pKa = 3.93GGEE2320 pKa = 4.13FAIDD2324 pKa = 3.5SATGAITTTAAFDD2337 pKa = 3.84YY2338 pKa = 7.42EE2339 pKa = 4.58TAASYY2344 pKa = 11.54ALTVTVTDD2352 pKa = 4.99GSAATDD2358 pKa = 3.57TAAVTVNVTDD2368 pKa = 3.7VNEE2371 pKa = 4.31APVAEE2376 pKa = 4.9DD2377 pKa = 3.29NSGSLAEE2384 pKa = 4.65DD2385 pKa = 3.46ATVGAAVATVAASDD2399 pKa = 3.58VDD2401 pKa = 3.74AGSVLSYY2408 pKa = 10.89AITAGNEE2415 pKa = 3.78SGAFAIDD2422 pKa = 3.49AGTGAITTAAALDD2435 pKa = 4.16FEE2437 pKa = 4.88TTPSYY2442 pKa = 11.55ALTVTVTDD2450 pKa = 4.69DD2451 pKa = 3.54GTPALSDD2458 pKa = 3.35TAAVAVTVTNVNEE2471 pKa = 4.0APVANDD2477 pKa = 3.4GSGSVDD2483 pKa = 3.22EE2484 pKa = 4.51NVSVGTVVATATASDD2499 pKa = 3.78VDD2501 pKa = 3.95AGDD2504 pKa = 3.75TLSYY2508 pKa = 10.79AITAGNTGGAFAIDD2522 pKa = 4.1SNSGVITTAGAIDD2535 pKa = 3.9YY2536 pKa = 7.48EE2537 pKa = 4.59AVSSYY2542 pKa = 11.44ALTVTVTDD2550 pKa = 4.02AGGLSDD2556 pKa = 3.67TALVSVSVNDD2566 pKa = 4.14IIEE2569 pKa = 3.96VTAPVVATGVASAVTQTSADD2589 pKa = 3.37VAYY2592 pKa = 9.2TISDD2596 pKa = 3.85DD2597 pKa = 4.58GGDD2600 pKa = 3.59APAVTVYY2607 pKa = 10.75YY2608 pKa = 10.97GEE2610 pKa = 4.74ADD2612 pKa = 3.42GGQVAGNWSNSIAQGNQAAGSYY2634 pKa = 9.53NAALTGLTAGTTYY2647 pKa = 10.94YY2648 pKa = 9.61FTVQASNSAGTVWGSSGSFTTVADD2672 pKa = 4.14TSPKK2676 pKa = 10.11LVRR2679 pKa = 11.84TTVSAVSSSTWTTVDD2694 pKa = 3.98LGQSYY2699 pKa = 10.86NSAVIVATPIYY2710 pKa = 9.22PNTSTPPVVTRR2721 pKa = 11.84IRR2723 pKa = 11.84NVSGSSFDD2731 pKa = 4.4LKK2733 pKa = 10.3IDD2735 pKa = 3.67RR2736 pKa = 11.84ADD2738 pKa = 3.52GLTGEE2743 pKa = 4.38VTIDD2747 pKa = 3.25VSVIAVEE2754 pKa = 4.09EE2755 pKa = 4.41GVYY2758 pKa = 8.75TQATDD2763 pKa = 3.58GVTMEE2768 pKa = 4.17AVKK2771 pKa = 9.44YY2772 pKa = 8.15TSTVTAEE2779 pKa = 3.98NNSWVAEE2786 pKa = 3.89ACAYY2790 pKa = 9.36QNSYY2794 pKa = 9.48TNPVVVGQVMSANDD2808 pKa = 3.8ASWSVFWSMGDD2819 pKa = 3.24SRR2821 pKa = 11.84QNPVDD2826 pKa = 3.55ASNLNVGKK2834 pKa = 9.85HH2835 pKa = 5.01VGEE2838 pKa = 4.97DD2839 pKa = 3.75PNATRR2844 pKa = 11.84ADD2846 pKa = 3.66EE2847 pKa = 4.59TIGYY2851 pKa = 9.18IVIEE2855 pKa = 4.52SGNGTINGVAYY2866 pKa = 9.51EE2867 pKa = 4.56AGLGADD2873 pKa = 3.45NVRR2876 pKa = 11.84GFDD2879 pKa = 3.68NSSTPYY2885 pKa = 10.18TYY2887 pKa = 10.95DD2888 pKa = 3.04LSGTLGSASAAALSISGMDD2907 pKa = 3.65GGDD2910 pKa = 3.64GAWAVLSGSNPITPTTLGLHH2930 pKa = 5.97ALEE2933 pKa = 4.97DD2934 pKa = 3.69QMGDD2938 pKa = 2.94SEE2940 pKa = 4.97LRR2942 pKa = 11.84HH2943 pKa = 5.28TTTQVGYY2950 pKa = 10.51LVFEE2954 pKa = 4.46

Molecular weight:
300.03 kDa
Isoelectric point according different methods:






Protein with the highest isoelectric point:
>tr|A0A7T7JBK7|A0A7T7JBK7_9BACT Uncharacterized protein OS=Verrucomicrobiales bacterium T37 OX=2707525 GN=G3M56_009185 PE=4 SV=1
MM1 pKa = 8.09RR2 pKa = 11.84EE3 pKa = 3.84RR4 pKa = 11.84KK5 pKa = 9.48SPKK8 pKa = 9.77LATAQEE14 pKa = 4.34PGLDD18 pKa = 3.31ISSLIDD24 pKa = 3.33VSFLLLIYY32 pKa = 9.99FLVTTTLKK40 pKa = 10.63PKK42 pKa = 10.41EE43 pKa = 3.95VDD45 pKa = 3.02LGFRR49 pKa = 11.84LPGEE53 pKa = 4.42GGGGEE58 pKa = 3.74RR59 pKa = 11.84RR60 pKa = 11.84FYY62 pKa = 10.92RR63 pKa = 11.84QLRR66 pKa = 11.84CPWRR70 pKa = 11.84RR71 pKa = 11.84MDD73 pKa = 3.44RR74 pKa = 11.84WWLIRR79 pKa = 11.84RR80 pKa = 11.84DD81 pKa = 3.59LRR83 pKa = 11.84RR84 pKa = 11.84TLVRR88 pKa = 11.84PEE90 pKa = 4.07RR91 pKa = 11.84IIAITNCISDD101 pKa = 3.61CWTTRR106 pKa = 2.97

Molecular weight:
12.58 kDa
Isoelectric point according different methods:






Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2971

0

2971

1053078

34

8300

354.5

38.86

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

10.203 ± 0.064

0.94 ± 0.016

6.228 ± 0.092

6.595 ± 0.045

3.858 ± 0.027

8.179 ± 0.068

2.15 ± 0.03

5.068 ± 0.043

4.178 ± 0.059

9.542 ± 0.059

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.353 ± 0.03

3.215 ± 0.03

4.795 ± 0.035

3.334 ± 0.03

6.038 ± 0.072

6.086 ± 0.041

5.512 ± 0.06

7.745 ± 0.057

1.501 ± 0.025

2.479 ± 0.034

Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski