Blautia sp. OF03-15BH
Average proteome isoelectric point is 6.16
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 3234 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|A0A413I0U7|A0A413I0U7_9FIRM Phosphotyrosine protein phosphatase OS=Blautia sp. OF03-15BH OX=2292287 GN=DXA57_10265 PE=4 SV=1
MM1 pKa = 7.55 KK2 pKa = 10.43 KK3 pKa = 8.69 FTKK6 pKa = 10.03 FVSAVAAVSLVAAPMAVSADD26 pKa = 3.31 EE27 pKa = 4.23 KK28 pKa = 10.53 TFLLGGSGPLTGAAASYY45 pKa = 7.46 GTSVKK50 pKa = 10.29 QGAEE54 pKa = 3.58 IAIQEE59 pKa = 4.15 INDD62 pKa = 3.61 AGGAQVGEE70 pKa = 4.12 DD71 pKa = 3.66 TYY73 pKa = 11.79 KK74 pKa = 11.14 LEE76 pKa = 5.14 LAFEE80 pKa = 4.85 DD81 pKa = 5.72 DD82 pKa = 4.23 EE83 pKa = 4.4 ATEE86 pKa = 4.41 DD87 pKa = 4.67 KK88 pKa = 10.95 AVQAYY93 pKa = 6.98 NTLMDD98 pKa = 3.7 KK99 pKa = 10.97 GINGFLGCTTSGSCIAVAQLSQQDD123 pKa = 4.63 GILQITPSGSAEE135 pKa = 4.02 GCIEE139 pKa = 4.19 PDD141 pKa = 2.93 NAFRR145 pKa = 11.84 ICFSDD150 pKa = 3.83 PEE152 pKa = 4.27 QGVAMADD159 pKa = 3.67 YY160 pKa = 11.1 AVDD163 pKa = 3.26 TLGYY167 pKa = 10.2 KK168 pKa = 10.23 KK169 pKa = 10.2 IAVLYY174 pKa = 9.8 NVADD178 pKa = 4.43 EE179 pKa = 4.49 YY180 pKa = 11.33 STGIYY185 pKa = 10.33 DD186 pKa = 4.18 AFTAEE191 pKa = 4.23 IEE193 pKa = 4.33 AKK195 pKa = 10.21 GAEE198 pKa = 4.18 IVDD201 pKa = 3.44 AEE203 pKa = 4.44 SFNTGDD209 pKa = 3.55 VDD211 pKa = 4.84 FNSQLTSIKK220 pKa = 9.79 GTDD223 pKa = 3.1 AEE225 pKa = 4.72 AIYY228 pKa = 10.81 VPAYY232 pKa = 9.41 YY233 pKa = 10.24 QDD235 pKa = 2.66 ITYY238 pKa = 8.55 ITKK241 pKa = 9.85 QASEE245 pKa = 4.79 LGMEE249 pKa = 4.45 LPFLGSDD256 pKa = 2.99 GWDD259 pKa = 3.16 GVLKK263 pKa = 9.96 TVTDD267 pKa = 3.84 PATVEE272 pKa = 4.14 GCIFTSPFCASVDD285 pKa = 3.64 DD286 pKa = 4.36 EE287 pKa = 4.5 KK288 pKa = 11.67 VVNFVKK294 pKa = 10.49 AYY296 pKa = 8.56 QDD298 pKa = 3.58 AYY300 pKa = 10.98 GEE302 pKa = 4.48 TPDD305 pKa = 4.65 QFAADD310 pKa = 4.33 AYY312 pKa = 10.64 DD313 pKa = 3.29 GVYY316 pKa = 10.64 AFKK319 pKa = 10.84 AAMEE323 pKa = 4.14 EE324 pKa = 4.04 AGSIEE329 pKa = 4.26 SADD332 pKa = 4.38 MIDD335 pKa = 4.19 AMTKK339 pKa = 9.75 ISVSGLTGDD348 pKa = 5.53 PITFDD353 pKa = 3.24 ASGAAVKK360 pKa = 10.06 DD361 pKa = 3.87 VKK363 pKa = 10.73 FVTVKK368 pKa = 10.53 DD369 pKa = 3.69 GQYY372 pKa = 10.31 TYY374 pKa = 11.59 VEE376 pKa = 4.21
Molecular weight: 39.62 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 3.702
IPC2_protein 3.834
IPC_protein 3.846
Toseland 3.63
ProMoST 3.986
Dawson 3.834
Bjellqvist 3.999
Wikipedia 3.745
Rodwell 3.668
Grimsley 3.541
Solomon 3.821
Lehninger 3.783
Nozaki 3.935
DTASelect 4.164
Thurlkill 3.668
EMBOSS 3.757
Sillero 3.961
Patrickios 1.329
IPC_peptide 3.821
IPC2_peptide 3.948
IPC2.peptide.svr19 3.87
Protein with the highest isoelectric point:
>tr|A0A413HYF6|A0A413HYF6_9FIRM Rhodanese-like domain-containing protein OS=Blautia sp. OF03-15BH OX=2292287 GN=DXA57_14260 PE=4 SV=1
MM1 pKa = 7.67 KK2 pKa = 8.72 MTFQPKK8 pKa = 8.86 KK9 pKa = 8.2 RR10 pKa = 11.84 SRR12 pKa = 11.84 AKK14 pKa = 9.27 VHH16 pKa = 5.81 GFRR19 pKa = 11.84 ARR21 pKa = 11.84 MSTANGRR28 pKa = 11.84 KK29 pKa = 8.89 VLAARR34 pKa = 11.84 RR35 pKa = 11.84 AKK37 pKa = 9.71 GRR39 pKa = 11.84 KK40 pKa = 8.73 VLSAA44 pKa = 4.05
Molecular weight: 4.99 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 9.494
IPC2_protein 11.111
IPC_protein 12.691
Toseland 12.852
ProMoST 13.349
Dawson 12.866
Bjellqvist 12.852
Wikipedia 13.334
Rodwell 12.647
Grimsley 12.896
Solomon 13.349
Lehninger 13.247
Nozaki 12.852
DTASelect 12.852
Thurlkill 12.852
EMBOSS 13.349
Sillero 12.852
Patrickios 12.369
IPC_peptide 13.349
IPC2_peptide 12.34
IPC2.peptide.svr19 9.095
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
3234
0
3234
1085421
27
3430
335.6
37.72
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
7.442 ± 0.043
1.472 ± 0.018
5.449 ± 0.034
8.076 ± 0.066
4.222 ± 0.035
7.152 ± 0.039
1.772 ± 0.017
6.683 ± 0.048
6.827 ± 0.044
9.4 ± 0.058
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
2.962 ± 0.023
4.074 ± 0.029
3.465 ± 0.029
3.186 ± 0.024
4.657 ± 0.037
5.801 ± 0.036
5.472 ± 0.044
6.727 ± 0.034
1.021 ± 0.014
4.141 ± 0.032
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here