Kytococcus aerolatus

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinomycetia; Micrococcales; Kytococcaceae;

Average proteome isoelectric point is 5.92

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2173 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A212U5C1|A0A212U5C1_9MICO Sulfate permease SulP family OS=Kytococcus aerolatus OX=592308 GN=SAMN05445756_1944 PE=4 SV=1
MM1 pKa = 7.62ARR3 pKa = 11.84LEE5 pKa = 4.03QAGITVTKK13 pKa = 10.52AAGNDD18 pKa = 3.47AEE20 pKa = 4.62DD21 pKa = 3.72ACGFMPGNSPGGITVGATGSYY42 pKa = 9.98AGEE45 pKa = 3.84VDD47 pKa = 3.72VQADD51 pKa = 3.55YY52 pKa = 11.84SNFGSCVDD60 pKa = 3.51IMAPGTGINSASNADD75 pKa = 4.06DD76 pKa = 4.09SSLLLMDD83 pKa = 4.86GTSMSTPHH91 pKa = 5.12VTGAAALYY99 pKa = 10.42LEE101 pKa = 4.5QHH103 pKa = 7.0PDD105 pKa = 3.17AAPDD109 pKa = 3.49EE110 pKa = 4.83VYY112 pKa = 10.47QALLDD117 pKa = 3.91AAAVDD122 pKa = 4.35KK123 pKa = 11.35LSGLNGSPNLLLNIEE138 pKa = 4.28NLIEE142 pKa = 4.31EE143 pKa = 5.11PEE145 pKa = 4.26PEE147 pKa = 4.19PTPEE151 pKa = 4.86PGLEE155 pKa = 4.02RR156 pKa = 11.84WWGADD161 pKa = 3.09RR162 pKa = 11.84YY163 pKa = 8.97GTAAEE168 pKa = 4.21TAVKK172 pKa = 10.01SGQADD177 pKa = 3.6TVYY180 pKa = 10.17IASGQGFADD189 pKa = 3.59AVTGGTAAQDD199 pKa = 3.68VPVLLTQPDD208 pKa = 3.82QASSPPAWTTPTPSPAAPPPRR229 pKa = 11.84PRR231 pKa = 11.84TAPCSS236 pKa = 3.57

Molecular weight: 23.97 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A212THL4|A0A212THL4_9MICO Osmoprotectant transport system ATP-binding protein OS=Kytococcus aerolatus OX=592308 GN=SAMN05445756_1356 PE=4 SV=1
MM1 pKa = 7.69SKK3 pKa = 9.0RR4 pKa = 11.84TFQPNNRR11 pKa = 11.84RR12 pKa = 11.84RR13 pKa = 11.84ARR15 pKa = 11.84KK16 pKa = 8.24HH17 pKa = 4.6GFRR20 pKa = 11.84ARR22 pKa = 11.84MSTRR26 pKa = 11.84AGRR29 pKa = 11.84AILAARR35 pKa = 11.84RR36 pKa = 11.84GKK38 pKa = 10.47GRR40 pKa = 11.84SKK42 pKa = 11.09LSAA45 pKa = 3.74

Molecular weight: 5.17 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2173

0

2173

726268

29

1652

334.2

35.78

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

13.095 ± 0.066

0.692 ± 0.014

5.827 ± 0.045

6.914 ± 0.056

2.499 ± 0.03

9.566 ± 0.044

2.362 ± 0.023

3.129 ± 0.036

1.784 ± 0.033

10.341 ± 0.069

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.01 ± 0.022

1.582 ± 0.023

5.887 ± 0.041

3.077 ± 0.031

7.732 ± 0.063

4.988 ± 0.035

6.065 ± 0.039

9.203 ± 0.046

1.614 ± 0.025

1.631 ± 0.025
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski