Beihai rhabdo-like virus 6

Taxonomy: Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Nyamiviridae; Crustavirus; Beihai crustavirus

Average proteome isoelectric point is 7.19

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1L3KMN0|A0A1L3KMN0_9MONO Putative glycoprotein OS=Beihai rhabdo-like virus 6 OX=1922656 PE=4 SV=1
MM1 pKa = 6.85TAAGPFTKK9 pKa = 10.13RR10 pKa = 11.84PRR12 pKa = 11.84HH13 pKa = 5.43YY14 pKa = 10.15EE15 pKa = 3.6SDD17 pKa = 3.41MVSLKK22 pKa = 10.36RR23 pKa = 11.84HH24 pKa = 5.77APSFTPLQMPHH35 pKa = 6.92EE36 pKa = 4.37IDD38 pKa = 3.15IRR40 pKa = 11.84SRR42 pKa = 11.84LYY44 pKa = 11.04NGTTTAIDD52 pKa = 3.18WVAAVAYY59 pKa = 8.77QYY61 pKa = 11.09RR62 pKa = 11.84LSSEE66 pKa = 4.42VIAKK70 pKa = 9.58LFSPYY75 pKa = 11.13ALDD78 pKa = 3.26QHH80 pKa = 6.34NRR82 pKa = 11.84PLYY85 pKa = 9.9FPRR88 pKa = 11.84FDD90 pKa = 3.73TEE92 pKa = 3.86DD93 pKa = 3.25AKK95 pKa = 10.83IANIRR100 pKa = 11.84ARR102 pKa = 11.84VKK104 pKa = 10.93DD105 pKa = 3.5SGKK108 pKa = 10.64EE109 pKa = 3.74GLEE112 pKa = 3.79AARR115 pKa = 11.84VGIQIAAYY123 pKa = 8.64AVIVGLHH130 pKa = 5.25KK131 pKa = 9.74TIEE134 pKa = 4.53DD135 pKa = 3.6KK136 pKa = 11.32NKK138 pKa = 9.74EE139 pKa = 4.04YY140 pKa = 10.81VLRR143 pKa = 11.84RR144 pKa = 11.84IAAVGASQDD153 pKa = 4.76DD154 pKa = 4.45EE155 pKa = 4.51ILTNIPVADD164 pKa = 3.39MDD166 pKa = 3.77YY167 pKa = 10.02WVVVDD172 pKa = 6.16RR173 pKa = 11.84INDD176 pKa = 3.13AHH178 pKa = 7.33KK179 pKa = 10.22YY180 pKa = 8.89IRR182 pKa = 11.84AAEE185 pKa = 3.95ITNDD189 pKa = 4.0LLHH192 pKa = 6.95DD193 pKa = 3.85VCTSVDD199 pKa = 3.74DD200 pKa = 5.23DD201 pKa = 4.08STPLHH206 pKa = 6.54IAMVDD211 pKa = 3.74SIKK214 pKa = 10.3MVLKK218 pKa = 10.47GYY220 pKa = 10.97GMLGTQVMANFLTTPSKK237 pKa = 10.63AWLMAQVLDD246 pKa = 3.9EE247 pKa = 5.08GIAFKK252 pKa = 10.71RR253 pKa = 11.84ALRR256 pKa = 11.84TFKK259 pKa = 10.76ALHH262 pKa = 6.0GDD264 pKa = 2.81SWEE267 pKa = 3.87WGRR270 pKa = 11.84VLKK273 pKa = 11.08LNTIEE278 pKa = 4.39TLDD281 pKa = 3.6KK282 pKa = 10.48TSYY285 pKa = 9.59PHH287 pKa = 7.24LYY289 pKa = 7.91WAAAVRR295 pKa = 11.84RR296 pKa = 11.84NGGTGGQADD305 pKa = 4.04GLKK308 pKa = 10.05NYY310 pKa = 8.97VMKK313 pKa = 10.9APDD316 pKa = 3.46GLMVNKK322 pKa = 8.77TQLEE326 pKa = 4.22SWALKK331 pKa = 10.4DD332 pKa = 3.55LASAAVLTATFAQKK346 pKa = 10.14IKK348 pKa = 9.41EE349 pKa = 4.28TLGINLDD356 pKa = 3.95DD357 pKa = 4.05KK358 pKa = 11.77VGDD361 pKa = 3.84KK362 pKa = 11.42VEE364 pKa = 4.23DD365 pKa = 3.65LL366 pKa = 4.17

Molecular weight: 40.83 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1L3KMM4|A0A1L3KMM4_9MONO Putative nucleoprotein OS=Beihai rhabdo-like virus 6 OX=1922656 PE=4 SV=1
MM1 pKa = 7.58AEE3 pKa = 3.66KK4 pKa = 10.42SRR6 pKa = 11.84RR7 pKa = 11.84KK8 pKa = 9.79KK9 pKa = 10.83SLGEE13 pKa = 3.88RR14 pKa = 11.84TPGSISARR22 pKa = 11.84VGDD25 pKa = 3.71RR26 pKa = 11.84AKK28 pKa = 10.51KK29 pKa = 9.83RR30 pKa = 11.84KK31 pKa = 8.3LTEE34 pKa = 4.13EE35 pKa = 4.2EE36 pKa = 4.63DD37 pKa = 3.85PLPAAIASFTEE48 pKa = 3.97LMEE51 pKa = 4.61GKK53 pKa = 9.74FARR56 pKa = 11.84VMEE59 pKa = 4.26ILEE62 pKa = 4.61EE63 pKa = 4.13IRR65 pKa = 11.84SQTAGMEE72 pKa = 4.0ARR74 pKa = 11.84ISSLEE79 pKa = 3.85RR80 pKa = 11.84RR81 pKa = 11.84VGNMNVDD88 pKa = 3.44PRR90 pKa = 11.84GTTVTAPPVATIGRR104 pKa = 11.84GRR106 pKa = 11.84GRR108 pKa = 11.84GLTLVPPRR116 pKa = 11.84QIGSTAAVGRR126 pKa = 11.84GRR128 pKa = 11.84GGRR131 pKa = 11.84GQPIAGPSSFRR142 pKa = 11.84PRR144 pKa = 11.84SPEE147 pKa = 3.68TGSDD151 pKa = 3.65DD152 pKa = 4.54EE153 pKa = 4.81EE154 pKa = 6.44DD155 pKa = 3.8GSAMDD160 pKa = 4.73GQPSDD165 pKa = 5.16DD166 pKa = 4.03RR167 pKa = 11.84YY168 pKa = 11.34EE169 pKa = 4.41DD170 pKa = 4.01ADD172 pKa = 4.66LLGLLL177 pKa = 4.64

Molecular weight: 18.95 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4

0

4

2884

177

1832

721.0

80.08

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.079 ± 1.04

1.872 ± 0.619

5.34 ± 0.798

6.727 ± 0.727

3.467 ± 0.42

7.767 ± 1.32

2.739 ± 0.57

4.716 ± 0.627

5.617 ± 0.603

9.847 ± 0.544

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.462 ± 0.225

2.288 ± 0.337

4.993 ± 0.426

2.739 ± 0.336

6.657 ± 0.797

7.282 ± 0.634

5.895 ± 0.319

7.004 ± 0.387

1.63 ± 0.226

2.878 ± 0.448
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski