Amino acid dipepetide frequency for Beihai rhabdo-like virus 6

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
9.712AlaAla: 9.712 ± 3.94
1.387AlaCys: 1.387 ± 0.809
3.815AlaAsp: 3.815 ± 0.634
4.509AlaGlu: 4.509 ± 0.531
2.081AlaPhe: 2.081 ± 0.628
7.978AlaGly: 7.978 ± 1.618
2.428AlaHis: 2.428 ± 1.691
3.122AlaIle: 3.122 ± 0.975
3.122AlaLys: 3.122 ± 0.775
8.325AlaLeu: 8.325 ± 1.559
1.734AlaMet: 1.734 ± 0.733
1.041AlaAsn: 1.041 ± 1.096
2.775AlaPro: 2.775 ± 0.904
2.428AlaGln: 2.428 ± 1.013
6.59AlaArg: 6.59 ± 1.815
5.897AlaSer: 5.897 ± 1.233
3.122AlaThr: 3.122 ± 0.456
6.937AlaVal: 6.937 ± 1.687
1.387AlaTrp: 1.387 ± 0.946
2.428AlaTyr: 2.428 ± 0.777
0.0AlaXaa: 0.0 ± 0.0
Cys
0.347CysAla: 0.347 ± 0.202
0.347CysCys: 0.347 ± 0.202
1.734CysAsp: 1.734 ± 0.712
0.347CysGlu: 0.347 ± 0.486
0.347CysPhe: 0.347 ± 0.486
1.734CysGly: 1.734 ± 0.712
1.041CysHis: 1.041 ± 0.847
0.347CysIle: 0.347 ± 0.202
1.387CysLys: 1.387 ± 0.756
0.347CysLeu: 0.347 ± 0.202
0.347CysMet: 0.347 ± 0.486
2.081CysAsn: 2.081 ± 0.766
2.081CysPro: 2.081 ± 0.724
1.387CysGln: 1.387 ± 1.329
1.041CysArg: 1.041 ± 0.362
1.387CysSer: 1.387 ± 0.809
1.734CysThr: 1.734 ± 0.33
0.347CysVal: 0.347 ± 0.202
0.0CysTrp: 0.0 ± 0.0
0.347CysTyr: 0.347 ± 0.202
0.0CysXaa: 0.0 ± 0.0
Asp
2.428AspAla: 2.428 ± 1.041
1.041AspCys: 1.041 ± 0.362
3.815AspAsp: 3.815 ± 2.397
3.122AspGlu: 3.122 ± 0.775
2.428AspPhe: 2.428 ± 1.416
3.122AspGly: 3.122 ± 2.222
1.387AspHis: 1.387 ± 0.448
2.428AspIle: 2.428 ± 0.983
3.122AspLys: 3.122 ± 1.938
5.203AspLeu: 5.203 ± 0.949
1.734AspMet: 1.734 ± 0.975
0.694AspAsn: 0.694 ± 0.404
4.856AspPro: 4.856 ± 1.724
1.041AspGln: 1.041 ± 0.487
3.469AspArg: 3.469 ± 1.369
5.203AspSer: 5.203 ± 2.093
2.081AspThr: 2.081 ± 0.34
2.428AspVal: 2.428 ± 1.691
1.734AspTrp: 1.734 ± 0.662
2.081AspTyr: 2.081 ± 0.813
0.0AspXaa: 0.0 ± 0.0
Glu
5.203GluAla: 5.203 ± 1.436
1.387GluCys: 1.387 ± 0.809
4.856GluAsp: 4.856 ± 2.248
7.284GluGlu: 7.284 ± 3.031
2.081GluPhe: 2.081 ± 0.766
5.203GluGly: 5.203 ± 0.929
0.694GluHis: 0.694 ± 0.378
3.815GluIle: 3.815 ± 1.78
2.428GluLys: 2.428 ± 1.082
3.122GluLeu: 3.122 ± 0.955
1.734GluMet: 1.734 ± 0.712
1.387GluAsn: 1.387 ± 0.809
2.081GluPro: 2.081 ± 1.213
1.041GluGln: 1.041 ± 0.607
4.856GluArg: 4.856 ± 1.422
5.897GluSer: 5.897 ± 1.93
6.59GluThr: 6.59 ± 1.712
3.815GluVal: 3.815 ± 0.771
2.428GluTrp: 2.428 ± 0.516
1.387GluTyr: 1.387 ± 0.428
0.0GluXaa: 0.0 ± 0.0
Phe
1.734PheAla: 1.734 ± 0.813
1.387PheCys: 1.387 ± 0.756
3.122PheAsp: 3.122 ± 0.792
2.081PheGlu: 2.081 ± 1.213
2.775PhePhe: 2.775 ± 1.064
2.081PheGly: 2.081 ± 1.134
0.347PheHis: 0.347 ± 0.202
0.0PheIle: 0.0 ± 0.0
2.081PheLys: 2.081 ± 0.973
2.081PheLeu: 2.081 ± 1.85
0.694PheMet: 0.694 ± 0.404
0.694PheAsn: 0.694 ± 0.973
1.387PhePro: 1.387 ± 0.545
1.387PheGln: 1.387 ± 0.448
3.469PheArg: 3.469 ± 1.59
3.469PheSer: 3.469 ± 1.54
3.815PheThr: 3.815 ± 1.103
1.387PheVal: 1.387 ± 0.448
0.347PheTrp: 0.347 ± 0.486
0.347PheTyr: 0.347 ± 0.202
0.0PheXaa: 0.0 ± 0.0
Gly
3.815GlyAla: 3.815 ± 1.174
1.734GlyCys: 1.734 ± 1.218
4.162GlyAsp: 4.162 ± 1.221
4.509GlyGlu: 4.509 ± 1.332
2.428GlyPhe: 2.428 ± 1.081
7.631GlyGly: 7.631 ± 4.924
2.428GlyHis: 2.428 ± 1.081
4.509GlyIle: 4.509 ± 1.278
5.203GlyLys: 5.203 ± 0.876
7.631GlyLeu: 7.631 ± 2.205
2.081GlyMet: 2.081 ± 0.652
2.081GlyAsn: 2.081 ± 1.433
4.509GlyPro: 4.509 ± 0.531
2.081GlyGln: 2.081 ± 1.571
5.55GlyArg: 5.55 ± 4.238
6.59GlySer: 6.59 ± 3.349
4.509GlyThr: 4.509 ± 1.816
3.815GlyVal: 3.815 ± 1.232
0.0GlyTrp: 0.0 ± 0.0
2.428GlyTyr: 2.428 ± 0.452
0.0GlyXaa: 0.0 ± 0.0
His
2.775HisAla: 2.775 ± 1.544
0.0HisCys: 0.0 ± 0.0
1.734HisAsp: 1.734 ± 0.33
1.041HisGlu: 1.041 ± 0.583
0.347HisPhe: 0.347 ± 0.202
2.428HisGly: 2.428 ± 1.073
1.041HisHis: 1.041 ± 0.847
1.041HisIle: 1.041 ± 0.487
1.387HisLys: 1.387 ± 1.123
4.856HisLeu: 4.856 ± 1.018
0.694HisMet: 0.694 ± 0.404
1.387HisAsn: 1.387 ± 0.946
1.387HisPro: 1.387 ± 0.809
1.387HisGln: 1.387 ± 0.809
0.694HisArg: 0.694 ± 0.404
2.081HisSer: 2.081 ± 1.134
1.734HisThr: 1.734 ± 0.712
0.347HisVal: 0.347 ± 0.486
0.347HisTrp: 0.347 ± 0.202
0.694HisTyr: 0.694 ± 0.76
0.0HisXaa: 0.0 ± 0.0
Ile
7.631IleAla: 7.631 ± 2.407
0.694IleCys: 0.694 ± 0.378
3.122IleAsp: 3.122 ± 1.195
2.775IleGlu: 2.775 ± 1.089
1.041IlePhe: 1.041 ± 0.362
2.775IleGly: 2.775 ± 1.336
1.387IleHis: 1.387 ± 0.756
1.387IleIle: 1.387 ± 0.809
3.469IleLys: 3.469 ± 0.826
4.509IleLeu: 4.509 ± 1.032
1.041IleMet: 1.041 ± 0.607
0.694IleAsn: 0.694 ± 1.204
3.122IlePro: 3.122 ± 0.792
0.347IleGln: 0.347 ± 0.602
3.815IleArg: 3.815 ± 1.393
2.775IleSer: 2.775 ± 1.483
2.428IleThr: 2.428 ± 0.452
3.122IleVal: 3.122 ± 1.35
0.694IleTrp: 0.694 ± 0.378
0.347IleTyr: 0.347 ± 0.486
0.0IleXaa: 0.0 ± 0.0
Lys
4.856LysAla: 4.856 ± 1.059
1.041LysCys: 1.041 ± 0.362
2.775LysAsp: 2.775 ± 0.74
4.509LysGlu: 4.509 ± 1.735
1.734LysPhe: 1.734 ± 0.677
5.203LysGly: 5.203 ± 1.965
1.734LysHis: 1.734 ± 0.594
3.815LysIle: 3.815 ± 1.469
2.775LysLys: 2.775 ± 1.336
5.55LysLeu: 5.55 ± 0.53
1.734LysMet: 1.734 ± 0.662
1.734LysAsn: 1.734 ± 1.34
1.041LysPro: 1.041 ± 0.362
1.041LysGln: 1.041 ± 0.607
4.162LysArg: 4.162 ± 1.168
3.469LysSer: 3.469 ± 1.362
3.815LysThr: 3.815 ± 1.552
3.469LysVal: 3.469 ± 0.659
1.041LysTrp: 1.041 ± 0.362
0.694LysTyr: 0.694 ± 0.509
0.0LysXaa: 0.0 ± 0.0
Leu
7.631LeuAla: 7.631 ± 2.992
2.775LeuCys: 2.775 ± 0.896
5.203LeuAsp: 5.203 ± 1.854
6.59LeuGlu: 6.59 ± 1.504
2.775LeuPhe: 2.775 ± 0.613
7.631LeuGly: 7.631 ± 1.544
2.428LeuHis: 2.428 ± 2.166
5.55LeuIle: 5.55 ± 1.947
9.365LeuLys: 9.365 ± 1.725
7.631LeuLeu: 7.631 ± 1.669
2.081LeuMet: 2.081 ± 2.285
2.428LeuAsn: 2.428 ± 0.452
4.509LeuPro: 4.509 ± 1.332
3.815LeuGln: 3.815 ± 1.734
6.243LeuArg: 6.243 ± 1.585
6.59LeuSer: 6.59 ± 2.766
5.203LeuThr: 5.203 ± 1.377
4.856LeuVal: 4.856 ± 1.704
2.081LeuTrp: 2.081 ± 1.213
3.122LeuTyr: 3.122 ± 1.46
0.0LeuXaa: 0.0 ± 0.0
Met
3.122MetAla: 3.122 ± 0.775
0.694MetCys: 0.694 ± 0.404
1.041MetAsp: 1.041 ± 0.906
2.081MetGlu: 2.081 ± 2.214
0.694MetPhe: 0.694 ± 0.404
0.694MetGly: 0.694 ± 0.378
0.347MetHis: 0.347 ± 0.202
1.387MetIle: 1.387 ± 0.809
1.734MetLys: 1.734 ± 0.662
3.815MetLeu: 3.815 ± 0.758
0.347MetMet: 0.347 ± 0.202
0.694MetAsn: 0.694 ± 0.738
0.347MetPro: 0.347 ± 0.602
0.347MetGln: 0.347 ± 0.486
1.041MetArg: 1.041 ± 0.362
1.387MetSer: 1.387 ± 0.448
1.041MetThr: 1.041 ± 0.487
3.469MetVal: 3.469 ± 2.259
0.347MetTrp: 0.347 ± 0.202
0.0MetTyr: 0.0 ± 0.0
0.0MetXaa: 0.0 ± 0.0
Asn
0.347AsnAla: 0.347 ± 0.202
0.0AsnCys: 0.0 ± 0.0
0.694AsnAsp: 0.694 ± 1.204
1.387AsnGlu: 1.387 ± 0.448
1.387AsnPhe: 1.387 ± 0.428
1.734AsnGly: 1.734 ± 1.34
0.347AsnHis: 0.347 ± 0.202
0.694AsnIle: 0.694 ± 1.204
1.387AsnLys: 1.387 ± 1.017
2.428AsnLeu: 2.428 ± 0.516
1.041AsnMet: 1.041 ± 0.711
0.347AsnAsn: 0.347 ± 0.202
1.734AsnPro: 1.734 ± 1.011
0.347AsnGln: 0.347 ± 0.202
0.694AsnArg: 0.694 ± 0.76
0.694AsnSer: 0.694 ± 0.973
2.081AsnThr: 2.081 ± 0.628
3.122AsnVal: 3.122 ± 0.808
0.694AsnTrp: 0.694 ± 0.404
1.734AsnTyr: 1.734 ± 0.33
0.0AsnXaa: 0.0 ± 0.0
Pro
3.469ProAla: 3.469 ± 1.051
0.694ProCys: 0.694 ± 0.378
1.734ProAsp: 1.734 ± 0.662
2.775ProGlu: 2.775 ± 0.822
2.428ProPhe: 2.428 ± 0.452
4.509ProGly: 4.509 ± 1.118
0.694ProHis: 0.694 ± 1.204
2.081ProIle: 2.081 ± 0.939
1.734ProLys: 1.734 ± 0.594
5.55ProLeu: 5.55 ± 1.13
1.387ProMet: 1.387 ± 0.809
1.387ProAsn: 1.387 ± 0.448
2.428ProPro: 2.428 ± 1.439
2.081ProGln: 2.081 ± 0.724
5.203ProArg: 5.203 ± 2.059
3.815ProSer: 3.815 ± 1.299
1.734ProThr: 1.734 ± 0.594
4.509ProVal: 4.509 ± 0.531
0.694ProTrp: 0.694 ± 0.404
1.041ProTyr: 1.041 ± 0.583
0.0ProXaa: 0.0 ± 0.0
Gln
1.734GlnAla: 1.734 ± 0.662
0.0GlnCys: 0.0 ± 0.0
1.387GlnAsp: 1.387 ± 0.545
2.081GlnGlu: 2.081 ± 1.213
0.347GlnPhe: 0.347 ± 0.202
0.694GlnGly: 0.694 ± 0.404
2.081GlnHis: 2.081 ± 0.34
1.387GlnIle: 1.387 ± 0.799
1.734GlnLys: 1.734 ± 0.662
2.775GlnLeu: 2.775 ± 0.613
0.694GlnMet: 0.694 ± 0.76
0.347GlnAsn: 0.347 ± 0.202
0.694GlnPro: 0.694 ± 1.631
0.694GlnGln: 0.694 ± 0.404
2.081GlnArg: 2.081 ± 1.213
1.387GlnSer: 1.387 ± 0.448
2.428GlnThr: 2.428 ± 0.722
3.122GlnVal: 3.122 ± 0.737
0.347GlnTrp: 0.347 ± 0.486
1.387GlnTyr: 1.387 ± 0.428
0.0GlnXaa: 0.0 ± 0.0
Arg
6.243ArgAla: 6.243 ± 0.485
1.734ArgCys: 1.734 ± 1.813
3.122ArgAsp: 3.122 ± 1.033
2.775ArgGlu: 2.775 ± 0.896
2.775ArgPhe: 2.775 ± 0.613
7.284ArgGly: 7.284 ± 5.09
2.775ArgHis: 2.775 ± 0.74
2.775ArgIle: 2.775 ± 0.904
3.815ArgLys: 3.815 ± 1.418
5.203ArgLeu: 5.203 ± 1.564
0.347ArgMet: 0.347 ± 0.202
0.347ArgAsn: 0.347 ± 0.602
4.509ArgPro: 4.509 ± 0.329
1.387ArgGln: 1.387 ± 0.741
4.162ArgArg: 4.162 ± 1.213
6.243ArgSer: 6.243 ± 1.051
2.428ArgThr: 2.428 ± 0.886
6.937ArgVal: 6.937 ± 1.848
0.347ArgTrp: 0.347 ± 0.202
1.387ArgTyr: 1.387 ± 0.741
0.0ArgXaa: 0.0 ± 0.0
Ser
3.815SerAla: 3.815 ± 1.422
1.041SerCys: 1.041 ± 0.362
6.243SerAsp: 6.243 ± 2.311
4.856SerGlu: 4.856 ± 1.29
3.122SerPhe: 3.122 ± 1.234
3.469SerGly: 3.469 ± 0.981
1.734SerHis: 1.734 ± 0.594
2.775SerIle: 2.775 ± 0.446
2.775SerLys: 2.775 ± 0.47
7.284SerLeu: 7.284 ± 2.259
1.041SerMet: 1.041 ± 0.607
0.347SerAsn: 0.347 ± 0.202
2.428SerPro: 2.428 ± 0.886
2.428SerGln: 2.428 ± 0.52
6.243SerArg: 6.243 ± 1.208
6.59SerSer: 6.59 ± 1.946
4.162SerThr: 4.162 ± 1.845
5.55SerVal: 5.55 ± 1.225
1.734SerTrp: 1.734 ± 0.98
5.203SerTyr: 5.203 ± 1.48
0.0SerXaa: 0.0 ± 0.0
Thr
6.243ThrAla: 6.243 ± 1.885
1.387ThrCys: 1.387 ± 0.756
0.347ThrAsp: 0.347 ± 0.486
4.856ThrGlu: 4.856 ± 1.146
2.081ThrPhe: 2.081 ± 0.861
4.162ThrGly: 4.162 ± 0.647
1.041ThrHis: 1.041 ± 0.362
3.469ThrIle: 3.469 ± 0.82
2.775ThrLys: 2.775 ± 0.613
8.325ThrLeu: 8.325 ± 1.608
1.041ThrMet: 1.041 ± 0.433
3.122ThrAsn: 3.122 ± 0.737
3.122ThrPro: 3.122 ± 1.445
1.734ThrGln: 1.734 ± 0.975
1.387ThrArg: 1.387 ± 0.756
4.509ThrSer: 4.509 ± 1.223
2.428ThrThr: 2.428 ± 1.749
3.815ThrVal: 3.815 ± 0.969
0.347ThrTrp: 0.347 ± 0.202
2.428ThrTyr: 2.428 ± 0.949
0.0ThrXaa: 0.0 ± 0.0
Val
5.203ValAla: 5.203 ± 1.419
0.694ValCys: 0.694 ± 0.76
2.775ValAsp: 2.775 ± 1.591
6.59ValGlu: 6.59 ± 1.587
1.734ValPhe: 1.734 ± 1.218
5.897ValGly: 5.897 ± 2.326
2.428ValHis: 2.428 ± 0.789
2.081ValIle: 2.081 ± 1.166
4.162ValLys: 4.162 ± 1.37
9.365ValLeu: 9.365 ± 1.725
3.122ValMet: 3.122 ± 1.001
1.387ValAsn: 1.387 ± 0.545
3.815ValPro: 3.815 ± 1.424
1.041ValGln: 1.041 ± 0.607
3.815ValArg: 3.815 ± 0.758
3.815ValSer: 3.815 ± 1.199
4.856ValThr: 4.856 ± 1.704
5.55ValVal: 5.55 ± 1.225
1.041ValTrp: 1.041 ± 0.362
0.694ValTyr: 0.694 ± 0.404
0.0ValXaa: 0.0 ± 0.0
Trp
2.428TrpAla: 2.428 ± 1.013
0.347TrpCys: 0.347 ± 0.202
0.694TrpAsp: 0.694 ± 0.378
1.734TrpGlu: 1.734 ± 0.777
1.041TrpPhe: 1.041 ± 0.607
0.694TrpGly: 0.694 ± 0.509
0.0TrpHis: 0.0 ± 0.0
1.041TrpIle: 1.041 ± 0.362
0.694TrpLys: 0.694 ± 0.404
1.041TrpLeu: 1.041 ± 0.583
1.387TrpMet: 1.387 ± 1.329
0.0TrpAsn: 0.0 ± 0.0
0.694TrpPro: 0.694 ± 0.404
0.347TrpGln: 0.347 ± 0.202
1.041TrpArg: 1.041 ± 0.847
0.347TrpSer: 0.347 ± 0.202
0.347TrpThr: 0.347 ± 0.202
1.734TrpVal: 1.734 ± 0.975
0.0TrpTrp: 0.0 ± 0.0
0.694TrpTyr: 0.694 ± 0.404
0.0TrpXaa: 0.0 ± 0.0
Tyr
2.081TyrAla: 2.081 ± 1.674
0.347TyrCys: 0.347 ± 0.202
1.041TyrAsp: 1.041 ± 0.607
1.387TyrGlu: 1.387 ± 0.989
1.041TyrPhe: 1.041 ± 0.583
2.775TyrGly: 2.775 ± 1.163
1.041TyrHis: 1.041 ± 0.362
3.469TyrIle: 3.469 ± 0.981
1.041TyrLys: 1.041 ± 0.362
3.469TyrLeu: 3.469 ± 2.022
0.0TyrMet: 0.0 ± 0.0
0.694TyrAsn: 0.694 ± 0.509
2.428TyrPro: 2.428 ± 0.452
1.041TyrGln: 1.041 ± 0.487
1.041TyrArg: 1.041 ± 0.487
0.694TyrSer: 0.694 ± 0.404
2.428TyrThr: 2.428 ± 0.949
1.734TyrVal: 1.734 ± 0.98
0.694TyrTrp: 0.694 ± 1.204
0.347TyrTyr: 0.347 ± 0.202
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 4 proteins (2884 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski